RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 RNF113AO15541 343 aaKnown RBP24.44■■□□□ 1.5
CPNE9-202ENST00000383831 MCMDC2Q4G0Z9 681 aa24.44■■□□□ 1.5
CPNE9-202ENST00000383831 MAP4K1Q92918 833 aa24.44■■□□□ 1.5
CPNE9-202ENST00000383831 SNX14Q9Y5W7 946 aa24.44■■□□□ 1.5
CPNE9-202ENST00000383831 POLRMTO00411 1230 aaKnown RBP24.44■■□□□ 1.5
CPNE9-202ENST00000383831 ZMYM1Q5SVZ6 1142 aa24.44■■□□□ 1.5
CPNE9-202ENST00000383831 CCDC129Q6ZRS4 1044 aa24.44■■□□□ 1.5
CPNE9-202ENST00000383831 SLKQ9H2G2 1235 aaPredicted RBP24.44■■□□□ 1.5
CPNE9-202ENST00000383831 RBM8AQ9Y5S9 174 aaKnown RBP24.44■■□□□ 1.5
CPNE9-202ENST00000383831 ST18O60284 1047 aa24.43■■□□□ 1.5
CPNE9-202ENST00000383831 ST5P78524 1137 aa24.43■■□□□ 1.5
CPNE9-202ENST00000383831 RASEFQ8IZ41 740 aa24.43■■□□□ 1.5
CPNE9-202ENST00000383831 HELLSQ9NRZ9 838 aa24.43■■□□□ 1.5
CPNE9-202ENST00000383831 NECTIN1Q15223 517 aa24.42■■□□□ 1.5
CPNE9-202ENST00000383831 PRPF40BQ6NWY9 871 aaKnown RBP24.42■■□□□ 1.5
CPNE9-202ENST00000383831 CYP2E1P05181 493 aaPredicted RBP24.42■■□□□ 1.5
CPNE9-202ENST00000383831 NEK4P51957 841 aa24.42■■□□□ 1.5
CPNE9-202ENST00000383831 KCNB2Q92953 911 aa24.42■■□□□ 1.5
CPNE9-202ENST00000383831 HMG20BQ9P0W2 317 aa24.42■■□□□ 1.5
CPNE9-202ENST00000383831 BCAMP50895 628 aa24.41■■□□□ 1.5
CPNE9-202ENST00000383831 UBE4AQ14139 1066 aa24.41■■□□□ 1.5
CPNE9-202ENST00000383831 LRRFIP1Q32MZ4 808 aaKnown RBP24.41■■□□□ 1.5
CPNE9-202ENST00000383831 FLAD1Q8NFF5 587 aa24.41■■□□□ 1.5
CPNE9-202ENST00000383831 MYH7P12883 1935 aa24.41■■□□□ 1.5
CPNE9-202ENST00000383831 WTIPA6NIX2 430 aaPredicted RBP24.4■■□□□ 1.5
CPNE9-202ENST00000383831 PNPLA7Q6ZV29 1317 aa24.4■■□□□ 1.5
CPNE9-202ENST00000383831 KCNJ4P48050 445 aa24.39■■□□□ 1.5
CPNE9-202ENST00000383831 RASGRF1Q13972 1273 aa24.39■■□□□ 1.5
CPNE9-202ENST00000383831 TTF1Q15361 905 aaPredicted RBP24.39■■□□□ 1.5
CPNE9-202ENST00000383831 SPATA5Q8NB90 893 aa24.39■■□□□ 1.5
CPNE9-202ENST00000383831 PIH1D3Q9NQM4 214 aaKnown RBP24.39■■□□□ 1.5
CPNE9-202ENST00000383831 ZFYP08048 801 aaPredicted RBP24.39■■□□□ 1.49
CPNE9-202ENST00000383831 GRAPQ13588 217 aa24.39■■□□□ 1.49
CPNE9-202ENST00000383831 EZH2Q15910 746 aaKnown RBP24.39■■□□□ 1.49
CPNE9-202ENST00000383831 CRY2Q49AN0 593 aa24.39■■□□□ 1.49
CPNE9-202ENST00000383831 CREB3L3Q68CJ9 461 aa24.39■■□□□ 1.49
CPNE9-202ENST00000383831 NLGN1Q8N2Q7 840 aa24.39■■□□□ 1.49
CPNE9-202ENST00000383831 GRAPLQ8TC17 118 aaPredicted RBP24.39■■□□□ 1.49
CPNE9-202ENST00000383831 CAMKK2Q96RR4 588 aa24.39■■□□□ 1.49
CPNE9-202ENST00000383831 UPF3BQ9BZI7 483 aaKnown RBP24.39■■□□□ 1.49
CPNE9-202ENST00000383831 MAST3O60307 1309 aa24.39■■□□□ 1.49
CPNE9-202ENST00000383831 EN1Q05925 392 aaPredicted RBP24.38■■□□□ 1.49
CPNE9-202ENST00000383831 MYO5AQ9Y4I1 1855 aaKnown RBP24.37■■□□□ 1.49
CPNE9-202ENST00000383831 OSBP2Q969R2 916 aa24.37■■□□□ 1.49
CPNE9-202ENST00000383831 ANKRD2Q9GZV1 360 aa24.37■■□□□ 1.49
CPNE9-202ENST00000383831 M0R2C6 588 aa24.37■■□□□ 1.49
CPNE9-202ENST00000383831 SLC27A2O14975 620 aa24.37■■□□□ 1.49
CPNE9-202ENST00000383831 RPGRQ92834 1020 aaKnown RBP24.37■■□□□ 1.49
CPNE9-202ENST00000383831 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.37■■□□□ 1.49
CPNE9-202ENST00000383831 ZNF804BA4D1E1 1349 aa24.36■■□□□ 1.49
CPNE9-202ENST00000383831 NRXN2Q9P2S2 1712 aa24.36■■□□□ 1.49
CPNE9-202ENST00000383831 GYG1P46976 350 aa24.36■■□□□ 1.49
CPNE9-202ENST00000383831 WASHC4Q2M389 1173 aa24.35■■□□□ 1.49
CPNE9-202ENST00000383831 APPBP2Q92624 585 aa24.35■■□□□ 1.49
CPNE9-202ENST00000383831 ANO8Q9HCE9 1232 aaPredicted RBP24.35■■□□□ 1.49
CPNE9-202ENST00000383831 DOCK2Q92608 1830 aa24.35■■□□□ 1.49
CPNE9-202ENST00000383831 ZKSCAN1P17029 563 aaPredicted RBP24.34■■□□□ 1.49
CPNE9-202ENST00000383831 ADCK5Q3MIX3 580 aa24.34■■□□□ 1.49
CPNE9-202ENST00000383831 IDH1O75874 414 aaKnown RBP24.34■■□□□ 1.49
CPNE9-202ENST00000383831 ADD2P35612 726 aa24.34■■□□□ 1.49
CPNE9-202ENST00000383831 VPS53Q5VIR6 699 aa24.34■■□□□ 1.49
CPNE9-202ENST00000383831 ZSCAN25Q6NSZ9 544 aa24.34■■□□□ 1.49
CPNE9-202ENST00000383831 SLC51AQ86UW1 340 aa24.34■■□□□ 1.49
CPNE9-202ENST00000383831 U3KPZ7 1027 aaPredicted RBP24.34■■□□□ 1.49
CPNE9-202ENST00000383831 ANKRD31Q8N7Z5 1873 aa24.33■■□□□ 1.49
CPNE9-202ENST00000383831 KLRK1P26718 216 aa24.33■■□□□ 1.49
CPNE9-202ENST00000383831 SLC9C2Q5TAH2 1124 aa24.33■■□□□ 1.49
CPNE9-202ENST00000383831 RNF20Q5VTR2 975 aa24.33■■□□□ 1.49
CPNE9-202ENST00000383831 RBM17Q96I25 401 aaKnown RBP24.33■■□□□ 1.49
CPNE9-202ENST00000383831 DSCC1Q9BVC3 393 aa24.33■■□□□ 1.49
CPNE9-202ENST00000383831 KLRG2A4D1S0 409 aaPredicted RBP24.32■■□□□ 1.48
CPNE9-202ENST00000383831 HSP90AA1P07900 732 aaKnown RBP24.32■■□□□ 1.48
CPNE9-202ENST00000383831 MCM2P49736 904 aa24.32■■□□□ 1.48
CPNE9-202ENST00000383831 CAVIN4Q5BKX8 364 aa24.32■■□□□ 1.48
CPNE9-202ENST00000383831 IL27Q8NEV9 243 aa24.32■■□□□ 1.48
CPNE9-202ENST00000383831 FAM84BQ96KN1 310 aaPredicted RBP24.32■■□□□ 1.48
CPNE9-202ENST00000383831 JAKMIP1Q96N16 626 aaKnown RBP24.32■■□□□ 1.48
CPNE9-202ENST00000383831 FOXD4L1Q9NU39 408 aa24.32■■□□□ 1.48
CPNE9-202ENST00000383831 IQSEC3Q9UPP2 1182 aaPredicted RBP24.32■■□□□ 1.48
CPNE9-202ENST00000383831 CASTP20810 708 aaKnown RBP24.31■■□□□ 1.48
CPNE9-202ENST00000383831 DDIT3P35638 169 aa24.31■■□□□ 1.48
CPNE9-202ENST00000383831 SLC15A2Q16348 729 aa24.31■■□□□ 1.48
CPNE9-202ENST00000383831 TM6SF1Q9BZW5 370 aa24.31■■□□□ 1.48
CPNE9-202ENST00000383831 PUS7LQ9H0K6 701 aaKnown RBP24.31■■□□□ 1.48
CPNE9-202ENST00000383831 GNL3LQ9NVN8 582 aaKnown RBP24.31■■□□□ 1.48
CPNE9-202ENST00000383831 WWC3Q9ULE0 1092 aa24.31■■□□□ 1.48
CPNE9-202ENST00000383831 TAF6LQ9Y6J9 622 aa24.31■■□□□ 1.48
CPNE9-202ENST00000383831 COL1A1P02452 1464 aaPredicted RBP24.31■■□□□ 1.48
CPNE9-202ENST00000383831 MMP10P09238 476 aa24.31■■□□□ 1.48
CPNE9-202ENST00000383831 HSPD1P10809 573 aaKnown RBP24.31■■□□□ 1.48
CPNE9-202ENST00000383831 PDE6AP16499 860 aa24.31■■□□□ 1.48
CPNE9-202ENST00000383831 TTC14Q96N46 770 aa24.31■■□□□ 1.48
CPNE9-202ENST00000383831 ANP32EQ9BTT0 268 aa24.31■■□□□ 1.48
CPNE9-202ENST00000383831 RPAP1Q9BWH6 1393 aaPredicted RBP24.3■■□□□ 1.48
CPNE9-202ENST00000383831 CPA1P15085 419 aa24.3■■□□□ 1.48
CPNE9-202ENST00000383831 HOXA10P31260 410 aaPredicted RBP24.3■■□□□ 1.48
CPNE9-202ENST00000383831 UBE3CQ15386 1083 aa24.3■■□□□ 1.48
CPNE9-202ENST00000383831 MSL1Q68DK7 614 aa24.3■■□□□ 1.48
CPNE9-202ENST00000383831 FBXO33Q7Z6M2 555 aa24.3■■□□□ 1.48
CPNE9-202ENST00000383831 ZSWIM6Q9HCJ5 1215 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms