RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 PHKA1P46020 1223 aa29.72■■■□□ 2.35
ECHDC3-201ENST00000379215 TTF1Q15361 905 aaPredicted RBP29.72■■■□□ 2.35
ECHDC3-201ENST00000379215 STYK1Q6J9G0 422 aa29.72■■■□□ 2.35
ECHDC3-201ENST00000379215 ANKIB1Q9P2G1 1089 aa29.72■■■□□ 2.35
ECHDC3-201ENST00000379215 ZNF804BA4D1E1 1349 aa29.72■■■□□ 2.35
ECHDC3-201ENST00000379215 PPEF1O14829 653 aaPredicted RBP29.71■■■□□ 2.35
ECHDC3-201ENST00000379215 PDGFDQ9GZP0 370 aaPredicted RBP29.71■■■□□ 2.35
ECHDC3-201ENST00000379215 FKBP4Q02790 459 aaKnown RBP eCLIP29.71■■■□□ 2.35
ECHDC3-201ENST00000379215 C2CD5Q86YS7 1000 aa29.71■■■□□ 2.35
ECHDC3-201ENST00000379215 TMX4Q9H1E5 349 aaPredicted RBP29.71■■■□□ 2.35
ECHDC3-201ENST00000379215 C10orf71Q711Q0 1435 aa29.7■■■□□ 2.35
ECHDC3-201ENST00000379215 SP8Q8IXZ3 490 aa29.7■■■□□ 2.34
ECHDC3-201ENST00000379215 MTFR1LQ9H019 292 aa29.7■■■□□ 2.34
ECHDC3-201ENST00000379215 ZBTB22O15209 634 aa29.69■■■□□ 2.34
ECHDC3-201ENST00000379215 MCAMP43121 646 aa29.69■■■□□ 2.34
ECHDC3-201ENST00000379215 VPS37DQ86XT2 251 aa29.69■■■□□ 2.34
ECHDC3-201ENST00000379215 SNAP23O00161 211 aa29.68■■■□□ 2.34
ECHDC3-201ENST00000379215 SGSM2O43147 1006 aa29.68■■■□□ 2.34
ECHDC3-201ENST00000379215 ATP2B4P23634 1241 aa29.68■■■□□ 2.34
ECHDC3-201ENST00000379215 PODXL2Q9NZ53 605 aa29.68■■■□□ 2.34
ECHDC3-201ENST00000379215 ATP6V0A2Q9Y487 856 aa29.68■■■□□ 2.34
ECHDC3-201ENST00000379215 LRRC37AA6NMS7 1700 aa29.68■■■□□ 2.34
ECHDC3-201ENST00000379215 COL11A2P13942 1736 aaPredicted RBP29.68■■■□□ 2.34
ECHDC3-201ENST00000379215 SEMA3EO15041 775 aa29.67■■■□□ 2.34
ECHDC3-201ENST00000379215 POLD1P28340 1107 aa29.67■■■□□ 2.34
ECHDC3-201ENST00000379215 RBM25P49756 843 aaKnown RBP29.67■■■□□ 2.34
ECHDC3-201ENST00000379215 CWC27Q6UX04 472 aaKnown RBP29.67■■■□□ 2.34
ECHDC3-201ENST00000379215 EDC3Q96F86 508 aaKnown RBP29.67■■■□□ 2.34
ECHDC3-201ENST00000379215 ZFYP08048 801 aaPredicted RBP29.67■■■□□ 2.34
ECHDC3-201ENST00000379215 SCARF1Q14162 830 aa29.67■■■□□ 2.34
ECHDC3-201ENST00000379215 C15orf52Q6ZUT6 534 aaKnown RBP29.67■■■□□ 2.34
ECHDC3-201ENST00000379215 CNKSR1Q969H4 720 aa29.67■■■□□ 2.34
ECHDC3-201ENST00000379215 ZAP70P43403 619 aa29.66■■■□□ 2.34
ECHDC3-201ENST00000379215 BCAMP50895 628 aa29.66■■■□□ 2.34
ECHDC3-201ENST00000379215 SPATA5Q8NB90 893 aa29.66■■■□□ 2.34
ECHDC3-201ENST00000379215 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.66■■■□□ 2.34
ECHDC3-201ENST00000379215 NDUFB9Q9Y6M9 179 aa29.66■■■□□ 2.34
ECHDC3-201ENST00000379215 ZSCAN25Q6NSZ9 544 aa29.65■■■□□ 2.34
ECHDC3-201ENST00000379215 KIAA1211Q6ZU35 1233 aa29.65■■■□□ 2.34
ECHDC3-201ENST00000379215 GGA1Q9UJY5 639 aa29.65■■■□□ 2.34
ECHDC3-201ENST00000379215 FBXO33Q7Z6M2 555 aa29.64■■■□□ 2.34
ECHDC3-201ENST00000379215 ZNF622Q969S3 477 aaKnown RBP eCLIP29.64■■■□□ 2.34
ECHDC3-201ENST00000379215 USP26Q9BXU7 913 aa29.64■■■□□ 2.34
ECHDC3-201ENST00000379215 SNRKQ9NRH2 765 aa29.64■■■□□ 2.34
ECHDC3-201ENST00000379215 HMG20BQ9P0W2 317 aa29.64■■■□□ 2.34
ECHDC3-201ENST00000379215 NSFL1CQ9UNZ2 370 aaKnown RBP29.64■■■□□ 2.34
ECHDC3-201ENST00000379215 GPSM2P81274 684 aa29.63■■■□□ 2.33
ECHDC3-201ENST00000379215 RASGRF1Q13972 1273 aa29.63■■■□□ 2.33
ECHDC3-201ENST00000379215 FAM84BQ96KN1 310 aaPredicted RBP29.63■■■□□ 2.33
ECHDC3-201ENST00000379215 ANO2Q9NQ90 1003 aa29.63■■■□□ 2.33
ECHDC3-201ENST00000379215 DENND2AQ9ULE3 1009 aa29.63■■■□□ 2.33
ECHDC3-201ENST00000379215 PDS5AQ29RF7 1337 aaKnown RBP29.63■■■□□ 2.33
ECHDC3-201ENST00000379215 HIBADHP31937 336 aaKnown RBP29.63■■■□□ 2.33
ECHDC3-201ENST00000379215 GYG1P46976 350 aa29.63■■■□□ 2.33
ECHDC3-201ENST00000379215 NMIQ13287 307 aaPredicted RBP29.63■■■□□ 2.33
ECHDC3-201ENST00000379215 MCCP23508 829 aa29.62■■■□□ 2.33
ECHDC3-201ENST00000379215 R3HDM1Q15032 1099 aaKnown RBP29.62■■■□□ 2.33
ECHDC3-201ENST00000379215 UFL1O94874 794 aa29.61■■■□□ 2.33
ECHDC3-201ENST00000379215 ANTXR1Q9H6X2 564 aa29.61■■■□□ 2.33
ECHDC3-201ENST00000379215 AKAP11Q9UKA4 1901 aa29.61■■■□□ 2.33
ECHDC3-201ENST00000379215 IRS2Q9Y4H2 1338 aa29.6■■■□□ 2.33
ECHDC3-201ENST00000379215 RNF113AO15541 343 aaKnown RBP29.6■■■□□ 2.33
ECHDC3-201ENST00000379215 ZBTB7AO95365 584 aa29.6■■■□□ 2.33
ECHDC3-201ENST00000379215 CYP2E1P05181 493 aaPredicted RBP29.6■■■□□ 2.33
ECHDC3-201ENST00000379215 DDRGK1Q96HY6 314 aa29.6■■■□□ 2.33
ECHDC3-201ENST00000379215 HELLSQ9NRZ9 838 aa29.6■■■□□ 2.33
ECHDC3-201ENST00000379215 PI16Q6UXB8 463 aa29.6■■■□□ 2.33
ECHDC3-201ENST00000379215 ZNF804AQ7Z570 1209 aa29.6■■■□□ 2.33
ECHDC3-201ENST00000379215 FAM227BQ96M60 508 aa29.59■■■□□ 2.33
ECHDC3-201ENST00000379215 MED23Q9ULK4 1368 aa29.58■■■□□ 2.33
ECHDC3-201ENST00000379215 A0A0D9SFI3 127 aa29.58■■■□□ 2.33
ECHDC3-201ENST00000379215 MCMDC2Q4G0Z9 681 aa29.58■■■□□ 2.33
ECHDC3-201ENST00000379215 CC2D2BQ6DHV5 1058 aa29.57■■■□□ 2.32
ECHDC3-201ENST00000379215 PRPF40BQ6NWY9 871 aaKnown RBP29.57■■■□□ 2.32
ECHDC3-201ENST00000379215 TBC1D16Q8TBP0 767 aa29.57■■■□□ 2.32
ECHDC3-201ENST00000379215 LTBP1Q14766 1721 aa29.57■■■□□ 2.32
ECHDC3-201ENST00000379215 IGSF3O75054 1194 aa29.56■■■□□ 2.32
ECHDC3-201ENST00000379215 FRAT2O75474 233 aaPredicted RBP29.56■■■□□ 2.32
ECHDC3-201ENST00000379215 MAP3K12Q12852 859 aa29.56■■■□□ 2.32
ECHDC3-201ENST00000379215 WASHC4Q2M389 1173 aa29.56■■■□□ 2.32
ECHDC3-201ENST00000379215 ZMYM1Q5SVZ6 1142 aa29.56■■■□□ 2.32
ECHDC3-201ENST00000379215 MPNDQ8N594 471 aa29.56■■■□□ 2.32
ECHDC3-201ENST00000379215 WTIPA6NIX2 430 aaPredicted RBP29.56■■■□□ 2.32
ECHDC3-201ENST00000379215 KLRK1P26718 216 aa29.56■■■□□ 2.32
ECHDC3-201ENST00000379215 CHRNA5P30532 468 aa29.56■■■□□ 2.32
ECHDC3-201ENST00000379215 GRIPAP1Q4V328 841 aa29.56■■■□□ 2.32
ECHDC3-201ENST00000379215 IL25Q9H293 177 aa29.56■■■□□ 2.32
ECHDC3-201ENST00000379215 DPP8Q6V1X1 898 aaPredicted RBP29.55■■■□□ 2.32
ECHDC3-201ENST00000379215 LSG1Q9H089 658 aaKnown RBP29.55■■■□□ 2.32
ECHDC3-201ENST00000379215 KIF13BQ9NQT8 1826 aa29.55■■■□□ 2.32
ECHDC3-201ENST00000379215 TGFB2P61812 414 aa29.54■■■□□ 2.32
ECHDC3-201ENST00000379215 UBE3CQ15386 1083 aa29.54■■■□□ 2.32
ECHDC3-201ENST00000379215 APPBP2Q92624 585 aa29.54■■■□□ 2.32
ECHDC3-201ENST00000379215 PIH1D3Q9NQM4 214 aaKnown RBP29.54■■■□□ 2.32
ECHDC3-201ENST00000379215 DLEC1Q9Y238 1755 aa29.54■■■□□ 2.32
ECHDC3-201ENST00000379215 C6orf229H3BNL8 230 aa29.53■■■□□ 2.32
ECHDC3-201ENST00000379215 IDH1O75874 414 aaKnown RBP29.53■■■□□ 2.32
ECHDC3-201ENST00000379215 TMED8Q6PL24 325 aaPredicted RBP29.53■■■□□ 2.32
ECHDC3-201ENST00000379215 ATF5Q9Y2D1 282 aaPredicted RBP29.53■■■□□ 2.32
ECHDC3-201ENST00000379215 CCDC171Q6TFL3 1326 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms