RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 SCN4AP35499 1836 aa24.82■■□□□ 1.56
RER1-204ENST00000378518 SNAP23O00161 211 aa24.81■■□□□ 1.56
RER1-204ENST00000378518 DDNO94850 711 aaPredicted RBP24.81■■□□□ 1.56
RER1-204ENST00000378518 CIAPIN1Q6FI81 312 aa24.81■■□□□ 1.56
RER1-204ENST00000378518 ZNF804AQ7Z570 1209 aa24.81■■□□□ 1.56
RER1-204ENST00000378518 PODNQ7Z5L7 613 aa24.81■■□□□ 1.56
RER1-204ENST00000378518 GJA3Q9Y6H8 435 aa24.81■■□□□ 1.56
RER1-204ENST00000378518 SCN9AQ15858 1988 aa24.81■■□□□ 1.56
RER1-204ENST00000378518 YDJCA8MPS7 323 aa24.8■■□□□ 1.56
RER1-204ENST00000378518 IFIT1P09914 478 aaKnown RBP24.8■■□□□ 1.56
RER1-204ENST00000378518 KLRK1P26718 216 aa24.8■■□□□ 1.56
RER1-204ENST00000378518 CXCL9Q07325 125 aa24.8■■□□□ 1.56
RER1-204ENST00000378518 OS9Q13438 667 aaPredicted RBP24.8■■□□□ 1.56
RER1-204ENST00000378518 CRBNQ96SW2 442 aa24.8■■□□□ 1.56
RER1-204ENST00000378518 ARAP2Q8WZ64 1704 aa24.8■■□□□ 1.56
RER1-204ENST00000378518 SURF6O75683 361 aaKnown RBP24.79■■□□□ 1.56
RER1-204ENST00000378518 RAD17O75943 681 aa24.79■■□□□ 1.56
RER1-204ENST00000378518 SLC5A1P13866 664 aa24.79■■□□□ 1.56
RER1-204ENST00000378518 TXNRD3Q86VQ6 643 aa24.79■■□□□ 1.56
RER1-204ENST00000378518 IRS2Q9Y4H2 1338 aa24.78■■□□□ 1.56
RER1-204ENST00000378518 MYH13Q9UKX3 1938 aa24.78■■□□□ 1.56
RER1-204ENST00000378518 ATP2B3Q16720 1220 aa24.77■■□□□ 1.56
RER1-204ENST00000378518 CAVIN4Q5BKX8 364 aa24.77■■□□□ 1.56
RER1-204ENST00000378518 LPIN2Q92539 896 aa24.77■■□□□ 1.56
RER1-204ENST00000378518 AKAP2Q9Y2D5 859 aa24.77■■□□□ 1.56
RER1-204ENST00000378518 IQCA1LA6NCM1 817 aa24.76■■□□□ 1.55
RER1-204ENST00000378518 VPS37DQ86XT2 251 aa24.76■■□□□ 1.55
RER1-204ENST00000378518 L3MBTL3Q96JM7 780 aaPredicted RBP24.76■■□□□ 1.55
RER1-204ENST00000378518 RRAGCQ9HB90 399 aa24.76■■□□□ 1.55
RER1-204ENST00000378518 CD209Q9NNX6 404 aa24.76■■□□□ 1.55
RER1-204ENST00000378518 NMRK2Q9NPI5 230 aa24.76■■□□□ 1.55
RER1-204ENST00000378518 NOP58Q9Y2X3 529 aaKnown RBP24.76■■□□□ 1.55
RER1-204ENST00000378518 FGFR2P21802 821 aa24.75■■□□□ 1.55
RER1-204ENST00000378518 LMOD1P29536 600 aaPredicted RBP24.75■■□□□ 1.55
RER1-204ENST00000378518 HIBADHP31937 336 aaKnown RBP24.75■■□□□ 1.55
RER1-204ENST00000378518 TFCP2Q12800 502 aa24.75■■□□□ 1.55
RER1-204ENST00000378518 HSP90AB4PQ58FF6 505 aa24.75■■□□□ 1.55
RER1-204ENST00000378518 PSMD14O00487 310 aa24.74■■□□□ 1.55
RER1-204ENST00000378518 VEGFAP15692 232 aaPredicted RBP24.74■■□□□ 1.55
RER1-204ENST00000378518 AAMPQ13685 434 aa24.74■■□□□ 1.55
RER1-204ENST00000378518 ERC1Q8IUD2 1116 aa24.74■■□□□ 1.55
RER1-204ENST00000378518 FBXW7Q969H0 707 aa24.74■■□□□ 1.55
RER1-204ENST00000378518 ZNF646O15015 1829 aaPredicted RBP24.74■■□□□ 1.55
RER1-204ENST00000378518 USP17L3A6NCW0 530 aa24.73■■□□□ 1.55
RER1-204ENST00000378518 USP17L4A6NCW7 530 aa24.73■■□□□ 1.55
RER1-204ENST00000378518 GYG1P46976 350 aa24.73■■□□□ 1.55
RER1-204ENST00000378518 USP17L1Q7RTZ2 530 aa24.73■■□□□ 1.55
RER1-204ENST00000378518 IL1R1P14778 569 aa24.72■■□□□ 1.55
RER1-204ENST00000378518 SIRT2Q8IXJ6 389 aa24.72■■□□□ 1.55
RER1-204ENST00000378518 C16orf71Q8IYS4 520 aaPredicted RBP24.72■■□□□ 1.55
RER1-204ENST00000378518 FAM84BQ96KN1 310 aaPredicted RBP24.72■■□□□ 1.55
RER1-204ENST00000378518 KCNQ5Q9NR82 932 aa24.72■■□□□ 1.55
RER1-204ENST00000378518 HACL1Q9UJ83 578 aa24.72■■□□□ 1.55
RER1-204ENST00000378518 ZNF609O15014 1411 aa24.71■■□□□ 1.55
RER1-204ENST00000378518 SASH1O94885 1247 aa24.71■■□□□ 1.55
RER1-204ENST00000378518 RPS12P25398 132 aaKnown RBP24.71■■□□□ 1.55
RER1-204ENST00000378518 EXOC6BQ9Y2D4 811 aa24.71■■□□□ 1.55
RER1-204ENST00000378518 A0A1B0GUL7 405 aa24.7■■□□□ 1.54
RER1-204ENST00000378518 VIL1P09327 827 aaKnown RBP24.7■■□□□ 1.54
RER1-204ENST00000378518 GMPSP49915 693 aaPredicted RBP24.7■■□□□ 1.54
RER1-204ENST00000378518 STRIP1Q5VSL9 837 aa24.7■■□□□ 1.54
RER1-204ENST00000378518 FBXO33Q7Z6M2 555 aa24.7■■□□□ 1.54
RER1-204ENST00000378518 MYO3BQ8WXR4 1341 aa24.69■■□□□ 1.54
RER1-204ENST00000378518 FRAT2O75474 233 aaPredicted RBP24.69■■□□□ 1.54
RER1-204ENST00000378518 SCNN1DP51172 638 aa24.69■■□□□ 1.54
RER1-204ENST00000378518 GTF2IP78347 998 aa24.69■■□□□ 1.54
RER1-204ENST00000378518 TTLL5Q6EMB2 1281 aa24.69■■□□□ 1.54
RER1-204ENST00000378518 RSBN1LQ6PCB5 846 aaPredicted RBP24.69■■□□□ 1.54
RER1-204ENST00000378518 GPR108Q9NPR9 543 aa24.69■■□□□ 1.54
RER1-204ENST00000378518 POTECB2RU33 542 aa24.68■■□□□ 1.54
RER1-204ENST00000378518 KIF3CO14782 793 aa24.68■■□□□ 1.54
RER1-204ENST00000378518 AGBL3Q8NEM8 1001 aa24.68■■□□□ 1.54
RER1-204ENST00000378518 TDRD7Q8NHU6 1098 aaKnown RBP24.68■■□□□ 1.54
RER1-204ENST00000378518 NEUROD6Q96NK8 337 aa24.68■■□□□ 1.54
RER1-204ENST00000378518 GNL3LQ9NVN8 582 aaKnown RBP24.68■■□□□ 1.54
RER1-204ENST00000378518 GPRC5DQ9NZD1 345 aa24.68■■□□□ 1.54
RER1-204ENST00000378518 ZBTB12Q9Y330 459 aaPredicted RBP24.68■■□□□ 1.54
RER1-204ENST00000378518 BCAMP50895 628 aa24.67■■□□□ 1.54
RER1-204ENST00000378518 TIMM10P62072 90 aa24.67■■□□□ 1.54
RER1-204ENST00000378518 DACT2Q5SW24 774 aa24.67■■□□□ 1.54
RER1-204ENST00000378518 DPF2Q92785 391 aa24.67■■□□□ 1.54
RER1-204ENST00000378518 RAB11FIP3O75154 756 aa24.66■■□□□ 1.54
RER1-204ENST00000378518 EPHX2P34913 555 aa24.66■■□□□ 1.54
RER1-204ENST00000378518 TNNI3KQ59H18 835 aa24.66■■□□□ 1.54
RER1-204ENST00000378518 GORABQ5T7V8 394 aa24.66■■□□□ 1.54
RER1-204ENST00000378518 EXOC6Q8TAG9 804 aa24.66■■□□□ 1.54
RER1-204ENST00000378518 KIF1BPQ96EK5 621 aa24.66■■□□□ 1.54
RER1-204ENST00000378518 FPGT-TNNI3KV9GXZ4 949 aa24.66■■□□□ 1.54
RER1-204ENST00000378518 H7C1D1 291 aa24.65■■□□□ 1.54
RER1-204ENST00000378518 CENPBP07199 599 aaPredicted RBP24.65■■□□□ 1.54
RER1-204ENST00000378518 PNMA8AQ86V59 439 aaPredicted RBP24.65■■□□□ 1.54
RER1-204ENST00000378518 XAGE2Q96GT9 111 aa24.65■■□□□ 1.54
RER1-204ENST00000378518 TAF1DQ9H5J8 278 aaPredicted RBP24.65■■□□□ 1.54
RER1-204ENST00000378518 CNOT7Q9UIV1 285 aaKnown RBP24.65■■□□□ 1.54
RER1-204ENST00000378518 PCDHB15Q9Y5E8 787 aa24.65■■□□□ 1.54
RER1-204ENST00000378518 ADORA1P30542 326 aa24.64■■□□□ 1.54
RER1-204ENST00000378518 MICALL2Q8IY33 904 aa24.64■■□□□ 1.54
RER1-204ENST00000378518 RHPN1Q8TCX5 695 aa24.64■■□□□ 1.54
RER1-204ENST00000378518 ADARB2Q9NS39 739 aaKnown RBP24.64■■□□□ 1.54
RER1-204ENST00000378518 IQSEC3Q9UPP2 1182 aaPredicted RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms