RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 SPATA31A3Q5VYP0 1347 aa18.1■□□□□ 0.49
FXN-201ENST00000377270 SCN11AQ9UI33 1791 aa18.09■□□□□ 0.49
FXN-201ENST00000377270 PIP4K2AP48426 406 aaPredicted RBP18.09■□□□□ 0.49
FXN-201ENST00000377270 INHBEP58166 350 aa18.09■□□□□ 0.49
FXN-201ENST00000377270 ST5P78524 1137 aa18.09■□□□□ 0.49
FXN-201ENST00000377270 G3BP1Q13283 466 aaKnown RBP eCLIP18.09■□□□□ 0.49
FXN-201ENST00000377270 AACSQ86V21 672 aa18.09■□□□□ 0.49
FXN-201ENST00000377270 IL17RAQ96F46 866 aa18.09■□□□□ 0.49
FXN-201ENST00000377270 GPATCH3Q96I76 525 aa18.09■□□□□ 0.49
FXN-201ENST00000377270 COL18A1P39060 1754 aa18.09■□□□□ 0.49
FXN-201ENST00000377270 POLR3GO15318 223 aaPredicted RBP18.09■□□□□ 0.49
FXN-201ENST00000377270 SNRPA1P09661 255 aaKnown RBP18.09■□□□□ 0.49
FXN-201ENST00000377270 C16orf45Q96MC5 204 aaPredicted RBP18.09■□□□□ 0.49
FXN-201ENST00000377270 MYD88Q99836 296 aa18.09■□□□□ 0.49
FXN-201ENST00000377270 CCDC196A0A1B0GTZ2 297 aa18.08■□□□□ 0.49
FXN-201ENST00000377270 NEURL1BA8MQ27 555 aa18.08■□□□□ 0.49
FXN-201ENST00000377270 FOXD4L6Q3SYB3 417 aaPredicted RBP18.08■□□□□ 0.49
FXN-201ENST00000377270 FOXD4L3Q6VB84 417 aaPredicted RBP18.08■□□□□ 0.49
FXN-201ENST00000377270 TMEM87AQ8NBN3 555 aa18.08■□□□□ 0.48
FXN-201ENST00000377270 LSG1Q9H089 658 aaKnown RBP18.08■□□□□ 0.48
FXN-201ENST00000377270 SASH1O94885 1247 aa18.07■□□□□ 0.48
FXN-201ENST00000377270 CABP4P57796 275 aa18.07■□□□□ 0.48
FXN-201ENST00000377270 GCKRQ14397 625 aa18.07■□□□□ 0.48
FXN-201ENST00000377270 ANKRD13DQ6ZTN6 518 aa18.07■□□□□ 0.48
FXN-201ENST00000377270 METTL22Q9BUU2 404 aaPredicted RBP18.07■□□□□ 0.48
FXN-201ENST00000377270 SIL1Q9H173 461 aa18.07■□□□□ 0.48
FXN-201ENST00000377270 RBM5P52756 815 aaKnown RBP eCLIP18.07■□□□□ 0.48
FXN-201ENST00000377270 FBXO18Q8NFZ0 1043 aa18.07■□□□□ 0.48
FXN-201ENST00000377270 FMNL2Q96PY5 1086 aa18.07■□□□□ 0.48
FXN-201ENST00000377270 C5P01031 1676 aa18.06■□□□□ 0.48
FXN-201ENST00000377270 AP5Z1O43299 807 aa18.06■□□□□ 0.48
FXN-201ENST00000377270 CEP89Q96ST8 783 aa18.06■□□□□ 0.48
FXN-201ENST00000377270 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.06■□□□□ 0.48
FXN-201ENST00000377270 WDR33Q9C0J8 1336 aaKnown RBP18.06■□□□□ 0.48
FXN-201ENST00000377270 SCP2P22307 547 aa18.06■□□□□ 0.48
FXN-201ENST00000377270 TTC19Q6DKK2 380 aaPredicted RBP18.06■□□□□ 0.48
FXN-201ENST00000377270 SPC24Q8NBT2 197 aa18.06■□□□□ 0.48
FXN-201ENST00000377270 CCDC8Q9H0W5 538 aaPredicted RBP18.06■□□□□ 0.48
FXN-201ENST00000377270 PAXBP1Q9Y5B6 917 aa18.06■□□□□ 0.48
FXN-201ENST00000377270 SNX14Q9Y5W7 946 aa18.06■□□□□ 0.48
FXN-201ENST00000377270 KLHDC4Q8TBB5 520 aa18.05■□□□□ 0.48
FXN-201ENST00000377270 EAF2Q96CJ1 260 aaPredicted RBP18.05■□□□□ 0.48
FXN-201ENST00000377270 LIG1P18858 919 aa18.05■□□□□ 0.48
FXN-201ENST00000377270 PLA2G4AP47712 749 aa18.05■□□□□ 0.48
FXN-201ENST00000377270 ELF2Q15723 593 aa18.05■□□□□ 0.48
FXN-201ENST00000377270 GOLGA5Q8TBA6 731 aa18.05■□□□□ 0.48
FXN-201ENST00000377270 RUFY2Q8WXA3 655 aa18.05■□□□□ 0.48
FXN-201ENST00000377270 FHOD1Q9Y613 1164 aa18.05■□□□□ 0.48
FXN-201ENST00000377270 GPS2Q13227 327 aa18.04■□□□□ 0.48
FXN-201ENST00000377270 SLFNL1Q499Z3 407 aa18.04■□□□□ 0.48
FXN-201ENST00000377270 EPHA10Q5JZY3 1008 aa18.04■□□□□ 0.48
FXN-201ENST00000377270 MMS22LQ6ZRQ5 1243 aa18.04■□□□□ 0.48
FXN-201ENST00000377270 FUCA2Q9BTY2 467 aa18.04■□□□□ 0.48
FXN-201ENST00000377270 CRYBG1Q9Y4K1 1723 aa18.04■□□□□ 0.48
FXN-201ENST00000377270 LRP10Q7Z4F1 713 aa18.04■□□□□ 0.48
FXN-201ENST00000377270 RASEFQ8IZ41 740 aa18.04■□□□□ 0.48
FXN-201ENST00000377270 TBC1D22AQ8WUA7 517 aa18.04■□□□□ 0.48
FXN-201ENST00000377270 ZNF215Q9UL58 517 aaPredicted RBP18.04■□□□□ 0.48
FXN-201ENST00000377270 TPM4P67936 248 aa18.03■□□□□ 0.48
FXN-201ENST00000377270 EVI5LQ96CN4 794 aa18.03■□□□□ 0.48
FXN-201ENST00000377270 CPDO75976 1380 aa18.03■□□□□ 0.48
FXN-201ENST00000377270 BRINP3Q76B58 766 aa18.03■□□□□ 0.48
FXN-201ENST00000377270 RPS6KL1Q9Y6S9 549 aa18.03■□□□□ 0.48
FXN-201ENST00000377270 UBE2HP62256 183 aa18.02■□□□□ 0.48
FXN-201ENST00000377270 PRDM11Q9NQV5 511 aa18.02■□□□□ 0.48
FXN-201ENST00000377270 TLR7Q9NYK1 1049 aaKnown RBP18.02■□□□□ 0.48
FXN-201ENST00000377270 ABCC6O95255 1503 aa18.02■□□□□ 0.47
FXN-201ENST00000377270 PTH1RQ03431 593 aa18.02■□□□□ 0.47
FXN-201ENST00000377270 PPM1EQ8WY54 764 aa18.02■□□□□ 0.47
FXN-201ENST00000377270 ATP5J2-PTCD1G3V325 749 aa18.01■□□□□ 0.47
FXN-201ENST00000377270 PTCD1O75127 700 aaKnown RBP18.01■□□□□ 0.47
FXN-201ENST00000377270 PTGS1P23219 599 aa18.01■□□□□ 0.47
FXN-201ENST00000377270 TOM1L2Q6ZVM7 507 aa18.01■□□□□ 0.47
FXN-201ENST00000377270 PIK3R5Q8WYR1 880 aa18.01■□□□□ 0.47
FXN-201ENST00000377270 NBPF3Q9H094 633 aa18.01■□□□□ 0.47
FXN-201ENST00000377270 RPAP1Q9BWH6 1393 aaPredicted RBP18.01■□□□□ 0.47
FXN-201ENST00000377270 NAIF1Q69YI7 327 aaPredicted RBP18.01■□□□□ 0.47
FXN-201ENST00000377270 MRC1P22897 1456 aa18■□□□□ 0.47
FXN-201ENST00000377270 PNMA6AP0CW24 399 aaPredicted RBP18■□□□□ 0.47
FXN-201ENST00000377270 GIMAP6Q6P9H5 292 aa18■□□□□ 0.47
FXN-201ENST00000377270 UBE3BQ7Z3V4 1068 aa18■□□□□ 0.47
FXN-201ENST00000377270 BOLA2Q9H3K6 86 aa18■□□□□ 0.47
FXN-201ENST00000377270 CNPY2Q9Y2B0 182 aa18■□□□□ 0.47
FXN-201ENST00000377270 EIF3CLB5ME19 914 aaKnown RBP18■□□□□ 0.47
FXN-201ENST00000377270 MAFGO15525 162 aa18■□□□□ 0.47
FXN-201ENST00000377270 ZCRB1Q8TBF4 217 aaKnown RBP18■□□□□ 0.47
FXN-201ENST00000377270 EIF3CQ99613 913 aaKnown RBP18■□□□□ 0.47
FXN-201ENST00000377270 LARP6Q9BRS8 491 aaKnown RBP18■□□□□ 0.47
FXN-201ENST00000377270 AK2P54819 239 aa17.99■□□□□ 0.47
FXN-201ENST00000377270 TTC14Q96N46 770 aa17.99■□□□□ 0.47
FXN-201ENST00000377270 PRPF40BQ6NWY9 871 aaKnown RBP17.99■□□□□ 0.47
FXN-201ENST00000377270 FAM210AQ96ND0 272 aa17.99■□□□□ 0.47
FXN-201ENST00000377270 TCHHQ07283 1943 aa17.98■□□□□ 0.47
FXN-201ENST00000377270 A0A087WZG4 1122 aa17.98■□□□□ 0.47
FXN-201ENST00000377270 CPA1P15085 419 aa17.98■□□□□ 0.47
FXN-201ENST00000377270 CASTP20810 708 aaKnown RBP17.98■□□□□ 0.47
FXN-201ENST00000377270 TTLL5Q6EMB2 1281 aa17.98■□□□□ 0.47
FXN-201ENST00000377270 FAM227BQ96M60 508 aa17.98■□□□□ 0.47
FXN-201ENST00000377270 WDR17Q8IZU2 1322 aa17.98■□□□□ 0.47
FXN-201ENST00000377270 PKD1L3Q7Z443 1732 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms