RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 IFFO1Q0D2I5 559 aa15.57■□□□□ 0.08
GPC6-201ENST00000377047 PHACTR3Q96KR7 559 aa15.57■□□□□ 0.08
GPC6-201ENST00000377047 TTC16Q8NEE8 873 aa15.57■□□□□ 0.08
GPC6-201ENST00000377047 FAM89AQ96GI7 184 aa15.57■□□□□ 0.08
GPC6-201ENST00000377047 GBP3Q9H0R5 595 aa15.57■□□□□ 0.08
GPC6-201ENST00000377047 COMMD10Q9Y6G5 202 aa15.57■□□□□ 0.08
GPC6-201ENST00000377047 ZSCAN22P10073 491 aaPredicted RBP15.57■□□□□ 0.08
GPC6-201ENST00000377047 KRT13P13646 458 aa15.56■□□□□ 0.08
GPC6-201ENST00000377047 MAP3K9P80192 1104 aa15.56■□□□□ 0.08
GPC6-201ENST00000377047 TBC1D5Q92609 795 aa15.56■□□□□ 0.08
GPC6-201ENST00000377047 PCDHB15Q9Y5E8 787 aa15.56■□□□□ 0.08
GPC6-201ENST00000377047 HCLS1P14317 486 aaPredicted RBP15.56■□□□□ 0.08
GPC6-201ENST00000377047 UBE2HP62256 183 aa15.56■□□□□ 0.08
GPC6-201ENST00000377047 KIF18AQ8NI77 898 aa15.56■□□□□ 0.08
GPC6-201ENST00000377047 ZBTB21Q9ULJ3 1066 aa15.56■□□□□ 0.08
GPC6-201ENST00000377047 POLR3AO14802 1390 aaPredicted RBP15.56■□□□□ 0.08
GPC6-201ENST00000377047 TCHPQ9BT92 498 aa15.56■□□□□ 0.08
GPC6-201ENST00000377047 TTC41PQ6P2S7 1318 aa15.56■□□□□ 0.08
GPC6-201ENST00000377047 USP37Q86T82 979 aa15.56■□□□□ 0.08
GPC6-201ENST00000377047 DDX17Q92841 729 aaKnown RBP15.56■□□□□ 0.08
GPC6-201ENST00000377047 DENND2AQ9ULE3 1009 aa15.56■□□□□ 0.08
GPC6-201ENST00000377047 N4BP3O15049 544 aa15.55■□□□□ 0.08
GPC6-201ENST00000377047 RBM27Q9P2N5 1060 aaKnown RBP15.55■□□□□ 0.08
GPC6-201ENST00000377047 MARCKSP29966 332 aaPredicted RBP15.55■□□□□ 0.08
GPC6-201ENST00000377047 RAB3GAP1Q15042 981 aa15.55■□□□□ 0.08
GPC6-201ENST00000377047 ESPNB1AK53 854 aa15.55■□□□□ 0.08
GPC6-201ENST00000377047 ZNF408Q9H9D4 720 aa15.55■□□□□ 0.08
GPC6-201ENST00000377047 ASIC1P78348 528 aa15.55■□□□□ 0.08
GPC6-201ENST00000377047 ITGA6P23229 1130 aa15.55■□□□□ 0.08
GPC6-201ENST00000377047 MAP9Q49MG5 647 aa15.55■□□□□ 0.08
GPC6-201ENST00000377047 CEP85Q6P2H3 762 aa15.55■□□□□ 0.08
GPC6-201ENST00000377047 ZNF790Q6PG37 636 aa15.55■□□□□ 0.08
GPC6-201ENST00000377047 KCNG4Q8TDN1 519 aa15.55■□□□□ 0.08
GPC6-201ENST00000377047 BIN2Q9UBW5 565 aaPredicted RBP15.55■□□□□ 0.08
GPC6-201ENST00000377047 VAMP4O75379 141 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 PSMD1Q99460 953 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 BCCIPQ9P287 314 aaKnown RBP eCLIP15.54■□□□□ 0.08
GPC6-201ENST00000377047 KRT2P35908 639 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 SP4Q02446 784 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 TEX11Q8IYF3 940 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 FAM212AQ96EL1 285 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 ABCC2Q92887 1545 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 ZNF165P49910 485 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 NCBP1Q09161 790 aaKnown RBP15.54■□□□□ 0.08
GPC6-201ENST00000377047 TMCO3Q6UWJ1 677 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 USP21Q9UK80 565 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 ZNF354CQ86Y25 554 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 DDX21Q9NR30 783 aaKnown RBP eCLIP15.54■□□□□ 0.08
GPC6-201ENST00000377047 GSDMDP57764 484 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 PARP10Q53GL7 1025 aa15.54■□□□□ 0.08
GPC6-201ENST00000377047 PUS7Q96PZ0 661 aaKnown RBP15.54■□□□□ 0.08
GPC6-201ENST00000377047 CCDC172P0C7W6 258 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 MAP2K1Q02750 393 aaPredicted RBP15.53■□□□□ 0.08
GPC6-201ENST00000377047 PRIM1P49642 420 aaKnown RBP15.53■□□□□ 0.08
GPC6-201ENST00000377047 PLBD2Q8NHP8 589 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 FERMT1Q9BQL6 677 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 TAOK3Q9H2K8 898 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 WDR62O43379 1518 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 MBD4O95243 580 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 CALML3P27482 149 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 APOBRQ0VD83 1088 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 TTC6Q86TZ1 520 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 TBC1D32Q96NH3 1257 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 GGA1Q9UJY5 639 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 ZKSCAN3Q9BRR0 538 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 PICK1Q9NRD5 415 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 ATP10AO60312 1499 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 LMAN1P49257 510 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 ZSCAN30Q86W11 494 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 CNPY2Q9Y2B0 182 aa15.53■□□□□ 0.08
GPC6-201ENST00000377047 RXRAP19793 462 aa15.52■□□□□ 0.08
GPC6-201ENST00000377047 HIBADHP31937 336 aaKnown RBP15.52■□□□□ 0.08
GPC6-201ENST00000377047 HSP90AA4PQ58FG1 418 aa15.52■□□□□ 0.08
GPC6-201ENST00000377047 CARD14Q9BXL6 1004 aa15.52■□□□□ 0.08
GPC6-201ENST00000377047 MCM3P25205 808 aa15.52■□□□□ 0.08
GPC6-201ENST00000377047 HLTFQ14527 1009 aaKnown RBP eCLIP15.52■□□□□ 0.08
GPC6-201ENST00000377047 TNNQ9UQP3 1299 aa15.52■□□□□ 0.08
GPC6-201ENST00000377047 H0YIN7 160 aa15.52■□□□□ 0.08
GPC6-201ENST00000377047 FAM13AO94988 1023 aa15.52■□□□□ 0.08
GPC6-201ENST00000377047 DHX58Q96C10 678 aa15.52■□□□□ 0.08
GPC6-201ENST00000377047 SPAG5Q96R06 1193 aa15.52■□□□□ 0.08
GPC6-201ENST00000377047 MRVI1Q9Y6F6 885 aa15.52■□□□□ 0.08
GPC6-201ENST00000377047 TRIM75PA6NK02 468 aa15.52■□□□□ 0.07
GPC6-201ENST00000377047 PARP1P09874 1014 aaKnown RBP15.52■□□□□ 0.07
GPC6-201ENST00000377047 MCM7P33993 719 aa15.52■□□□□ 0.07
GPC6-201ENST00000377047 KRT79Q5XKE5 535 aa15.52■□□□□ 0.07
GPC6-201ENST00000377047 DPH6Q7L8W6 267 aa15.52■□□□□ 0.07
GPC6-201ENST00000377047 SH3TC1Q8TE82 1336 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 GCOM1H8Y6P7 765 aaPredicted RBP15.51■□□□□ 0.07
GPC6-201ENST00000377047 MYZAPP0CAP1 466 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 GIMAP6Q6P9H5 292 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 CCDC171Q6TFL3 1326 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 CCDC24Q8N4L8 307 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 RGS22Q8NE09 1264 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 NAA15Q9BXJ9 866 aaKnown RBP15.51■□□□□ 0.07
GPC6-201ENST00000377047 ADCY5O95622 1261 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 APBA3O96018 575 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 SH2D4AQ9H788 454 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 SBNO1A3KN83 1393 aa15.51■□□□□ 0.07
GPC6-201ENST00000377047 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms