RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 TCERG1O14776 1098 aaKnown RBP12.51□□□□□ -0.41
C9orf85-202ENST00000377027 PPEF1O14829 653 aaPredicted RBP12.51□□□□□ -0.41
C9orf85-202ENST00000377027 SCNN1DP51172 638 aa12.51□□□□□ -0.41
C9orf85-202ENST00000377027 NEUROD2Q15784 382 aa12.51□□□□□ -0.41
C9orf85-202ENST00000377027 SLC10A5Q5PT55 438 aa12.51□□□□□ -0.41
C9orf85-202ENST00000377027 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
C9orf85-202ENST00000377027 NLRP10Q86W26 655 aa12.51□□□□□ -0.41
C9orf85-202ENST00000377027 RPGRQ92834 1020 aaKnown RBP12.51□□□□□ -0.41
C9orf85-202ENST00000377027 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
C9orf85-202ENST00000377027 PNNQ9H307 717 aaKnown RBP12.51□□□□□ -0.41
C9orf85-202ENST00000377027 MKRN1Q9UHC7 482 aaKnown RBP12.51□□□□□ -0.41
C9orf85-202ENST00000377027 ADAMTS8Q9UP79 889 aa12.51□□□□□ -0.41
C9orf85-202ENST00000377027 CNTNAP1P78357 1384 aa12.51□□□□□ -0.41
C9orf85-202ENST00000377027 ZMYND10O75800 440 aa12.5□□□□□ -0.41
C9orf85-202ENST00000377027 EPHX2P34913 555 aa12.5□□□□□ -0.41
C9orf85-202ENST00000377027 FMR1Q06787 632 aaKnown RBP eCLIP12.5□□□□□ -0.41
C9orf85-202ENST00000377027 FAM161AQ3B820 660 aa12.5□□□□□ -0.41
C9orf85-202ENST00000377027 PARP10Q53GL7 1025 aa12.5□□□□□ -0.41
C9orf85-202ENST00000377027 GPC2Q8N158 579 aa12.5□□□□□ -0.41
C9orf85-202ENST00000377027 HACL1Q9UJ83 578 aa12.5□□□□□ -0.41
C9orf85-202ENST00000377027 HCLS1P14317 486 aaPredicted RBP12.49□□□□□ -0.41
C9orf85-202ENST00000377027 AIMP1Q12904 312 aaKnown RBP12.49□□□□□ -0.41
C9orf85-202ENST00000377027 EAPPQ56P03 285 aaPredicted RBP12.49□□□□□ -0.41
C9orf85-202ENST00000377027 MAP1SQ66K74 1059 aaPredicted RBP12.49□□□□□ -0.41
C9orf85-202ENST00000377027 RBM17Q96I25 401 aaKnown RBP12.49□□□□□ -0.41
C9orf85-202ENST00000377027 UTP14AQ9BVJ6 771 aaKnown RBP12.49□□□□□ -0.41
C9orf85-202ENST00000377027 DDX21Q9NR30 783 aaKnown RBP eCLIP12.49□□□□□ -0.41
C9orf85-202ENST00000377027 CHPF2Q9P2E5 772 aa12.49□□□□□ -0.41
C9orf85-202ENST00000377027 EPS15P42566 896 aa12.48□□□□□ -0.41
C9orf85-202ENST00000377027 AOC3Q16853 763 aa12.48□□□□□ -0.41
C9orf85-202ENST00000377027 CC2D2BQ6DHV5 1058 aa12.48□□□□□ -0.41
C9orf85-202ENST00000377027 PPP1R42Q7Z4L9 355 aa12.48□□□□□ -0.41
C9orf85-202ENST00000377027 RUNDC1Q96C34 613 aa12.48□□□□□ -0.41
C9orf85-202ENST00000377027 ATP6V0A2Q9Y487 856 aa12.48□□□□□ -0.41
C9orf85-202ENST00000377027 SCN9AQ15858 1988 aa12.47□□□□□ -0.41
C9orf85-202ENST00000377027 LMOD3Q0VAK6 560 aa12.47□□□□□ -0.41
C9orf85-202ENST00000377027 TCIRG1Q13488 830 aa12.47□□□□□ -0.41
C9orf85-202ENST00000377027 ZFRQ96KR1 1074 aaKnown RBP12.47□□□□□ -0.41
C9orf85-202ENST00000377027 NLRP3Q96P20 1036 aa12.47□□□□□ -0.41
C9orf85-202ENST00000377027 RTFDC1Q9BY42 306 aaPredicted RBP12.47□□□□□ -0.41
C9orf85-202ENST00000377027 GOLGA8CPA6NN73 597 aa12.46□□□□□ -0.41
C9orf85-202ENST00000377027 OATP04181 439 aa12.46□□□□□ -0.41
C9orf85-202ENST00000377027 ZNF853P0CG23 659 aa12.46□□□□□ -0.41
C9orf85-202ENST00000377027 VEGFBP49765 207 aa12.46□□□□□ -0.41
C9orf85-202ENST00000377027 MAP2K5Q13163 448 aa12.46□□□□□ -0.41
C9orf85-202ENST00000377027 LARGE2Q8N3Y3 721 aa12.46□□□□□ -0.41
C9orf85-202ENST00000377027 RNF166Q96A37 237 aaPredicted RBP12.46□□□□□ -0.41
C9orf85-202ENST00000377027 ISCA1Q9BUE6 129 aa12.46□□□□□ -0.41
C9orf85-202ENST00000377027 PRKRIP1Q9H875 184 aaPredicted RBP12.46□□□□□ -0.41
C9orf85-202ENST00000377027 MBIPQ9NS73 344 aa12.46□□□□□ -0.41
C9orf85-202ENST00000377027 GJA3Q9Y6H8 435 aa12.46□□□□□ -0.41
C9orf85-202ENST00000377027 ZNF646O15015 1829 aaPredicted RBP12.46□□□□□ -0.42
C9orf85-202ENST00000377027 TMEM88BA6NKF7 163 aa12.45□□□□□ -0.42
C9orf85-202ENST00000377027 FOXN1O15353 648 aa12.45□□□□□ -0.42
C9orf85-202ENST00000377027 PPIP5K2O43314 1243 aa12.45□□□□□ -0.42
C9orf85-202ENST00000377027 HDGFL1Q5TGJ6 251 aa12.45□□□□□ -0.42
C9orf85-202ENST00000377027 CNTROBQ8N137 903 aa12.45□□□□□ -0.42
C9orf85-202ENST00000377027 JDP2Q8WYK2 163 aa12.45□□□□□ -0.42
C9orf85-202ENST00000377027 LAS1LQ9Y4W2 734 aaKnown RBP12.45□□□□□ -0.42
C9orf85-202ENST00000377027 PSME4Q14997 1843 aa12.44□□□□□ -0.42
C9orf85-202ENST00000377027 SH3TC1Q8TE82 1336 aa12.44□□□□□ -0.42
C9orf85-202ENST00000377027 SHTN1A0MZ66 631 aa12.44□□□□□ -0.42
C9orf85-202ENST00000377027 RASSF10A6NK89 507 aa12.44□□□□□ -0.42
C9orf85-202ENST00000377027 YDJCA8MPS7 323 aa12.44□□□□□ -0.42
C9orf85-202ENST00000377027 IRF6O14896 467 aa12.44□□□□□ -0.42
C9orf85-202ENST00000377027 HOXB7P09629 217 aa12.44□□□□□ -0.42
C9orf85-202ENST00000377027 EIF6P56537 245 aaKnown RBP12.44□□□□□ -0.42
C9orf85-202ENST00000377027 CXCL9Q07325 125 aa12.44□□□□□ -0.42
C9orf85-202ENST00000377027 PNMA8AQ86V59 439 aaPredicted RBP12.44□□□□□ -0.42
C9orf85-202ENST00000377027 TRMT112Q9UI30 125 aaKnown RBP12.44□□□□□ -0.42
C9orf85-202ENST00000377027 SPEF2Q9C093 1822 aa12.44□□□□□ -0.42
C9orf85-202ENST00000377027 ATP5J2-PTCD1G3V325 749 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 TRAF5O00463 557 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 GRAPQ13588 217 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 WDR43Q15061 677 aaKnown RBP eCLIP12.43□□□□□ -0.42
C9orf85-202ENST00000377027 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 CCDC184Q52MB2 194 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 HSP90AB3PQ58FF7 597 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 DUSP27Q5VZP5 1158 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 METTL3Q86U44 580 aaKnown RBP12.43□□□□□ -0.42
C9orf85-202ENST00000377027 SP8Q8IXZ3 490 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 NIM1KQ8IY84 436 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 TNS4Q8IZW8 715 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 PLBD2Q8NHP8 589 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 GRAPLQ8TC17 118 aaPredicted RBP12.43□□□□□ -0.42
C9orf85-202ENST00000377027 PXYLP1Q8TE99 480 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 CELF1Q92879 486 aaKnown RBP12.43□□□□□ -0.42
C9orf85-202ENST00000377027 WNT2BQ93097 391 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
C9orf85-202ENST00000377027 FAM89AQ96GI7 184 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 PLSCR2Q9NRY7 297 aa12.43□□□□□ -0.42
C9orf85-202ENST00000377027 POLR2AP24928 1970 aaKnown RBP12.42□□□□□ -0.42
C9orf85-202ENST00000377027 KIAA2012Q0VF49 1180 aa12.42□□□□□ -0.42
C9orf85-202ENST00000377027 CST9Q5W186 159 aa12.42□□□□□ -0.42
C9orf85-202ENST00000377027 PHAXQ9H814 394 aaKnown RBP12.42□□□□□ -0.42
C9orf85-202ENST00000377027 GPRC5DQ9NZD1 345 aa12.42□□□□□ -0.42
C9orf85-202ENST00000377027 MYH3P11055 1940 aa12.41□□□□□ -0.42
C9orf85-202ENST00000377027 APAF1O14727 1248 aa12.41□□□□□ -0.42
C9orf85-202ENST00000377027 BBOX1O75936 387 aa12.41□□□□□ -0.42
C9orf85-202ENST00000377027 GMPSP49915 693 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms