RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 AIDAQ96BJ3 306 aa16.71■□□□□ 0.27
TNFRSF1B-201ENST00000376259 DIP2CQ9Y2E4 1556 aa16.71■□□□□ 0.27
TNFRSF1B-201ENST00000376259 SLC9C2Q5TAH2 1124 aa16.71■□□□□ 0.26
TNFRSF1B-201ENST00000376259 AIFM3Q96NN9 605 aa16.71■□□□□ 0.26
TNFRSF1B-201ENST00000376259 SLC26A6Q9BXS9 759 aa16.71■□□□□ 0.26
TNFRSF1B-201ENST00000376259 TBC1D2BQ9UPU7 963 aa16.71■□□□□ 0.26
TNFRSF1B-201ENST00000376259 SPTLC2O15270 562 aa16.7■□□□□ 0.26
TNFRSF1B-201ENST00000376259 TDO2P48775 406 aa16.7■□□□□ 0.26
TNFRSF1B-201ENST00000376259 ZNF215Q9UL58 517 aaPredicted RBP16.7■□□□□ 0.26
TNFRSF1B-201ENST00000376259 E7EWF7 191 aa16.7■□□□□ 0.26
TNFRSF1B-201ENST00000376259 TEX35Q5T0J7 233 aa16.7■□□□□ 0.26
TNFRSF1B-201ENST00000376259 UBXN4Q92575 508 aa16.7■□□□□ 0.26
TNFRSF1B-201ENST00000376259 ALG1Q9BT22 464 aa16.7■□□□□ 0.26
TNFRSF1B-201ENST00000376259 CTNNA3Q9UI47 895 aa16.7■□□□□ 0.26
TNFRSF1B-201ENST00000376259 KIF6Q6ZMV9 814 aa16.69■□□□□ 0.26
TNFRSF1B-201ENST00000376259 KBTBD3Q8NAB2 608 aa16.69■□□□□ 0.26
TNFRSF1B-201ENST00000376259 CNNM3Q8NE01 707 aa16.69■□□□□ 0.26
TNFRSF1B-201ENST00000376259 SIRT1Q96EB6 747 aa16.69■□□□□ 0.26
TNFRSF1B-201ENST00000376259 ERICH2A1L162 156 aa16.69■□□□□ 0.26
TNFRSF1B-201ENST00000376259 USP27XA6NNY8 438 aa16.69■□□□□ 0.26
TNFRSF1B-201ENST00000376259 HMGB1P09429 215 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1B-201ENST00000376259 TERF1P54274 439 aa16.69■□□□□ 0.26
TNFRSF1B-201ENST00000376259 hCG_1642624A0A1W2PR95 340 aa16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 IFIT3O14879 490 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 ADORA1P30542 326 aa16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 ADD1P35611 737 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 SYKP43405 635 aa16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 ST3GAL1Q11201 340 aa16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 SLC52A2Q9HAB3 445 aa16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 CEP170BQ9Y4F5 1589 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 METAP2P50579 478 aaKnown RBP eCLIP16.68■□□□□ 0.265e-7■□□□□ 8.2
TNFRSF1B-201ENST00000376259 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 CLIC4Q9Y696 253 aa16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 B4E1Z4 1266 aa16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 UBASH3AP57075 661 aa16.68■□□□□ 0.26
TNFRSF1B-201ENST00000376259 KDRP35968 1356 aa16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 TOP1P11387 765 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 STX17P56962 302 aa16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 TRMT112Q9UI30 125 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 RNF113AO15541 343 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 HOXB7P09629 217 aa16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 HSPD1P10809 573 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 ATP5JP18859 108 aa16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 ZAP70P43403 619 aa16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 NDUFA8P51970 172 aa16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 FAM160A1Q05DH4 1040 aa16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 XPO4Q9C0E2 1151 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 GOLGA8AA7E2F4 631 aa16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 CTAGE5O15320 804 aa16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 UTP14AQ9BVJ6 771 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 NAPBQ9H115 298 aa16.67■□□□□ 0.26
TNFRSF1B-201ENST00000376259 AFMP43652 599 aa16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 DPCR1Q3MIW9 517 aa16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 TMEM67Q5HYA8 995 aa16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 PCDHA7Q9UN72 937 aa16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 SNAP23O00161 211 aa16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 NCOA7Q8NI08 942 aa16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 KAZALD1Q96I82 304 aa16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 IARSP41252 1262 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 BICDL1Q6ZP65 573 aa16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 SYNE4Q8N205 404 aa16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 MIGA1Q8NAN2 632 aa16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 NSUN7Q8NE18 718 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 PCMTD1Q96MG8 357 aaPredicted RBP16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 MPHOSPH8Q99549 860 aa16.66■□□□□ 0.26
TNFRSF1B-201ENST00000376259 SMTNL1A8MU46 457 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 KARSQ15046 597 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 ZNF827Q17R98 1081 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 STOX1Q6ZVD7 989 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 CLIC6Q96NY7 704 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 LRP2BPQ9P2M1 347 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 OVOS2A0A0J9YW53 1432 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 OVOS2Q6IE36 1432 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 TMEM87AQ8NBN3 555 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 INCENPQ9NQS7 918 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 MYO5BQ9ULV0 1848 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 IL15P40933 162 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 GNG11P61952 73 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 ERCC6LQ2NKX8 1250 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 JMYQ8N9B5 988 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 GOLPH3LQ9H4A5 285 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 BABAM1Q9NWV8 329 aa16.65■□□□□ 0.26
TNFRSF1B-201ENST00000376259 VIRMAQ69YN4 1812 aaKnown RBP16.64■□□□□ 0.26
TNFRSF1B-201ENST00000376259 TRMT44Q8IYL2 757 aaKnown RBP16.64■□□□□ 0.25
TNFRSF1B-201ENST00000376259 ZNF710Q8N1W2 664 aa16.64■□□□□ 0.25
TNFRSF1B-201ENST00000376259 STAMQ92783 540 aa16.64■□□□□ 0.25
TNFRSF1B-201ENST00000376259 SIGLEC1Q9BZZ2 1709 aa16.64■□□□□ 0.25
TNFRSF1B-201ENST00000376259 ARHGEF25Q86VW2 580 aa16.64■□□□□ 0.25
TNFRSF1B-201ENST00000376259 LRRC8AQ8IWT6 810 aa16.64■□□□□ 0.25
TNFRSF1B-201ENST00000376259 ZNF202O95125 648 aa16.64■□□□□ 0.25
TNFRSF1B-201ENST00000376259 RESTQ13127 1097 aa16.64■□□□□ 0.25
TNFRSF1B-201ENST00000376259 XAGE2Q96GT9 111 aa16.64■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PAXBP1Q9Y5B6 917 aa16.64■□□□□ 0.25
TNFRSF1B-201ENST00000376259 SLC12A7Q9Y666 1083 aa16.64■□□□□ 0.25
TNFRSF1B-201ENST00000376259 EYA2O00167 538 aa16.63■□□□□ 0.25
TNFRSF1B-201ENST00000376259 COBLO75128 1261 aa16.63■□□□□ 0.25
TNFRSF1B-201ENST00000376259 PDIA3P30101 505 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms