RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ZNF609O15014 1411 aa14.47□□□□□ -0.09
UBR4-203ENST00000375225 ELP1O95163 1332 aa14.47□□□□□ -0.09
UBR4-203ENST00000375225 FIBPO43427 364 aa14.47□□□□□ -0.09
UBR4-203ENST00000375225 LARGE1O95461 756 aa14.47□□□□□ -0.09
UBR4-203ENST00000375225 IFIT1P09914 478 aaKnown RBP14.47□□□□□ -0.09
UBR4-203ENST00000375225 HSP90B1P14625 803 aaKnown RBP14.47□□□□□ -0.09
UBR4-203ENST00000375225 TAF7LQ5H9L4 462 aa14.47□□□□□ -0.09
UBR4-203ENST00000375225 CTNNA3Q9UI47 895 aa14.47□□□□□ -0.09
UBR4-203ENST00000375225 GOLGA6L4A6NEF3 574 aa14.46□□□□□ -0.09
UBR4-203ENST00000375225 FOXD4L6Q3SYB3 417 aaPredicted RBP14.46□□□□□ -0.09
UBR4-203ENST00000375225 GORABQ5T7V8 394 aa14.46□□□□□ -0.09
UBR4-203ENST00000375225 FOXD4L3Q6VB84 417 aaPredicted RBP14.46□□□□□ -0.09
UBR4-203ENST00000375225 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.46□□□□□ -0.09
UBR4-203ENST00000375225 ZNF589Q86UQ0 364 aaPredicted RBP14.46□□□□□ -0.09
UBR4-203ENST00000375225 PLA2G12BQ9BX93 195 aa14.46□□□□□ -0.09
UBR4-203ENST00000375225 ZSCAN16Q9H4T2 348 aaPredicted RBP14.46□□□□□ -0.09
UBR4-203ENST00000375225 NSFL1CQ9UNZ2 370 aaKnown RBP14.46□□□□□ -0.09
UBR4-203ENST00000375225 TBC1D2BQ9UPU7 963 aa14.46□□□□□ -0.09
UBR4-203ENST00000375225 ZNF652Q9Y2D9 606 aa14.46□□□□□ -0.09
UBR4-203ENST00000375225 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.46□□□□□ -0.09
UBR4-203ENST00000375225 C4BP0C0L5 1744 aa14.46□□□□□ -0.09
UBR4-203ENST00000375225 SCN7AQ01118 1682 aa14.46□□□□□ -0.09
UBR4-203ENST00000375225 GADD45BO75293 160 aaPredicted RBP14.46□□□□□ -0.1
UBR4-203ENST00000375225 PCCAP05165 728 aaPredicted RBP14.46□□□□□ -0.1
UBR4-203ENST00000375225 HMGN5P82970 282 aaKnown RBP14.46□□□□□ -0.1
UBR4-203ENST00000375225 ATG9AQ7Z3C6 839 aa14.46□□□□□ -0.1
UBR4-203ENST00000375225 JARID2Q92833 1246 aaPredicted RBP14.46□□□□□ -0.1
UBR4-203ENST00000375225 NAP1L5Q96NT1 182 aaPredicted RBP14.46□□□□□ -0.1
UBR4-203ENST00000375225 LARP6Q9BRS8 491 aaKnown RBP14.46□□□□□ -0.1
UBR4-203ENST00000375225 GDPD2Q9HCC8 539 aa14.46□□□□□ -0.1
UBR4-203ENST00000375225 GOLIM4O00461 696 aa14.45□□□□□ -0.1
UBR4-203ENST00000375225 RNF113AO15541 343 aaKnown RBP14.45□□□□□ -0.1
UBR4-203ENST00000375225 PTMAP06454 111 aaKnown RBP14.45□□□□□ -0.1
UBR4-203ENST00000375225 TOB2Q14106 344 aaPredicted RBP14.45□□□□□ -0.1
UBR4-203ENST00000375225 HLFQ16534 295 aa14.45□□□□□ -0.1
UBR4-203ENST00000375225 TTC39AQ5SRH9 613 aa14.45□□□□□ -0.1
UBR4-203ENST00000375225 ZMYM1Q5SVZ6 1142 aa14.45□□□□□ -0.1
UBR4-203ENST00000375225 DDX46Q7L014 1031 aaKnown RBP14.45□□□□□ -0.1
UBR4-203ENST00000375225 NECAB1Q8N987 351 aa14.45□□□□□ -0.1
UBR4-203ENST00000375225 GTF3C6Q969F1 213 aa14.45□□□□□ -0.1
UBR4-203ENST00000375225 NOL7Q9UMY1 257 aaKnown RBP14.45□□□□□ -0.1
UBR4-203ENST00000375225 MYH3P11055 1940 aa14.44□□□□□ -0.1
UBR4-203ENST00000375225 H3BQV1 296 aa14.44□□□□□ -0.1
UBR4-203ENST00000375225 RGL2O15211 777 aa14.44□□□□□ -0.1
UBR4-203ENST00000375225 TRIM37O94972 964 aa14.44□□□□□ -0.1
UBR4-203ENST00000375225 DNM1Q05193 864 aaKnown RBP14.44□□□□□ -0.1
UBR4-203ENST00000375225 SLC27A3Q5K4L6 730 aa14.44□□□□□ -0.1
UBR4-203ENST00000375225 IFFO2Q5TF58 517 aa14.44□□□□□ -0.1
UBR4-203ENST00000375225 ZSCAN25Q6NSZ9 544 aa14.44□□□□□ -0.1
UBR4-203ENST00000375225 DHX32Q7L7V1 743 aaKnown RBP14.44□□□□□ -0.1
UBR4-203ENST00000375225 NLRP10Q86W26 655 aa14.44□□□□□ -0.1
UBR4-203ENST00000375225 ZBTB38Q8NAP3 1195 aaPredicted RBP14.44□□□□□ -0.1
UBR4-203ENST00000375225 CFAP45Q9UL16 551 aa14.44□□□□□ -0.1
UBR4-203ENST00000375225 CDHR2Q9BYE9 1310 aa14.43□□□□□ -0.1
UBR4-203ENST00000375225 A0A1B0GUL7 405 aa14.43□□□□□ -0.1
UBR4-203ENST00000375225 RPS6KA4O75676 772 aa14.43□□□□□ -0.1
UBR4-203ENST00000375225 CAMTA2O94983 1202 aa14.43□□□□□ -0.1
UBR4-203ENST00000375225 GPTP24298 496 aa14.43□□□□□ -0.1
UBR4-203ENST00000375225 IFIT5Q13325 482 aaKnown RBP14.43□□□□□ -0.1
UBR4-203ENST00000375225 PARP10Q53GL7 1025 aa14.43□□□□□ -0.1
UBR4-203ENST00000375225 ATL3Q6DD88 541 aa14.43□□□□□ -0.1
UBR4-203ENST00000375225 Q6ZUG5 572 aa14.43□□□□□ -0.1
UBR4-203ENST00000375225 CHAMP1Q96JM3 812 aa14.43□□□□□ -0.1
UBR4-203ENST00000375225 RTCBQ9Y3I0 505 aaKnown RBP14.43□□□□□ -0.1
UBR4-203ENST00000375225 GNPATO15228 680 aa14.42□□□□□ -0.1
UBR4-203ENST00000375225 CCDC192P0DO97 292 aa14.42□□□□□ -0.1
UBR4-203ENST00000375225 KCNQ4P56696 695 aa14.42□□□□□ -0.1
UBR4-203ENST00000375225 CLEC4GQ6UXB4 293 aa14.42□□□□□ -0.1
UBR4-203ENST00000375225 ZNF34Q8IZ26 560 aa14.42□□□□□ -0.1
UBR4-203ENST00000375225 EDC3Q96F86 508 aaKnown RBP14.42□□□□□ -0.1
UBR4-203ENST00000375225 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.42□□□□□ -0.16e-13■■■□□ 19.1
UBR4-203ENST00000375225 TPM3P06753 285 aa14.41□□□□□ -0.1
UBR4-203ENST00000375225 CYP21A2P08686 494 aa14.41□□□□□ -0.1
UBR4-203ENST00000375225 ST3GAL1Q11201 340 aa14.41□□□□□ -0.1
UBR4-203ENST00000375225 RNF214Q8ND24 703 aa14.41□□□□□ -0.1
UBR4-203ENST00000375225 SPATA32Q96LK8 384 aa14.41□□□□□ -0.1
UBR4-203ENST00000375225 AK7Q96M32 723 aa14.41□□□□□ -0.1
UBR4-203ENST00000375225 DDX19AQ9NUU7 478 aaKnown RBP14.41□□□□□ -0.1
UBR4-203ENST00000375225 ZKSCAN5Q9Y2L8 839 aa14.41□□□□□ -0.1
UBR4-203ENST00000375225 LAMB2P55268 1798 aa14.41□□□□□ -0.1
UBR4-203ENST00000375225 ZNF500O60304 480 aaPredicted RBP14.41□□□□□ -0.1
UBR4-203ENST00000375225 PFKFB2O60825 505 aa14.41□□□□□ -0.1
UBR4-203ENST00000375225 TPM2P07951 284 aa14.41□□□□□ -0.1
UBR4-203ENST00000375225 TTF1Q15361 905 aaPredicted RBP14.41□□□□□ -0.1
UBR4-203ENST00000375225 TRMT112Q9UI30 125 aaKnown RBP14.41□□□□□ -0.1
UBR4-203ENST00000375225 C4AP0C0L4 1744 aa14.4□□□□□ -0.1
UBR4-203ENST00000375225 ZPR1O75312 459 aa14.4□□□□□ -0.1
UBR4-203ENST00000375225 CSF1RP07333 972 aa14.4□□□□□ -0.1
UBR4-203ENST00000375225 TERF1P54274 439 aa14.4□□□□□ -0.1
UBR4-203ENST00000375225 TIMM10P62072 90 aa14.4□□□□□ -0.1
UBR4-203ENST00000375225 STK3Q13188 491 aa14.4□□□□□ -0.1
UBR4-203ENST00000375225 MAP3K11Q16584 847 aa14.4□□□□□ -0.1
UBR4-203ENST00000375225 NAA16Q6N069 864 aaPredicted RBP14.4□□□□□ -0.1
UBR4-203ENST00000375225 CDC37L1Q7L3B6 337 aa14.4□□□□□ -0.1
UBR4-203ENST00000375225 ZNF274Q96GC6 653 aaPredicted RBP14.4□□□□□ -0.1
UBR4-203ENST00000375225 FAM89AQ96GI7 184 aa14.4□□□□□ -0.1
UBR4-203ENST00000375225 NUP62CLQ9H1M0 184 aa14.4□□□□□ -0.1
UBR4-203ENST00000375225 RGPD3A6NKT7 1758 aaPredicted RBP14.4□□□□□ -0.1
UBR4-203ENST00000375225 RGPD4Q7Z3J3 1758 aa14.4□□□□□ -0.1
UBR4-203ENST00000375225 UBR3Q6ZT12 1888 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms