RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CCDC30Q5VVM6 783 aa23.87■■□□□ 1.41
TMEFF1-201ENST00000374879 CCDC73Q6ZRK6 1079 aa23.87■■□□□ 1.41
TMEFF1-201ENST00000374879 ANKRD65E5RJM6 399 aa23.87■■□□□ 1.41
TMEFF1-201ENST00000374879 CCP110O43303 1012 aa23.87■■□□□ 1.41
TMEFF1-201ENST00000374879 ENGASEQ8NFI3 743 aa23.87■■□□□ 1.41
TMEFF1-201ENST00000374879 PSMA5P28066 241 aa23.86■■□□□ 1.41
TMEFF1-201ENST00000374879 BLOC1S2Q6QNY1 142 aa23.86■■□□□ 1.41
TMEFF1-201ENST00000374879 RSRC2Q7L4I2 434 aaKnown RBP23.86■■□□□ 1.41
TMEFF1-201ENST00000374879 TAF6LQ9Y6J9 622 aa23.86■■□□□ 1.41
TMEFF1-201ENST00000374879 CHD2O14647 1828 aaKnown RBP23.86■■□□□ 1.41
TMEFF1-201ENST00000374879 H3BQV1 296 aa23.86■■□□□ 1.41
TMEFF1-201ENST00000374879 SLC27A2O14975 620 aa23.86■■□□□ 1.41
TMEFF1-201ENST00000374879 ADD1P35611 737 aaKnown RBP23.86■■□□□ 1.41
TMEFF1-201ENST00000374879 IFFO2Q5TF58 517 aa23.86■■□□□ 1.41
TMEFF1-201ENST00000374879 ANKRD1Q15327 319 aa23.85■■□□□ 1.41
TMEFF1-201ENST00000374879 UTP14AQ9BVJ6 771 aaKnown RBP23.85■■□□□ 1.41
TMEFF1-201ENST00000374879 HOXC9P31274 260 aa23.85■■□□□ 1.41
TMEFF1-201ENST00000374879 E2F4Q16254 413 aa23.85■■□□□ 1.41
TMEFF1-201ENST00000374879 FMNL2Q96PY5 1086 aa23.85■■□□□ 1.41
TMEFF1-201ENST00000374879 MAP2K7O14733 419 aa23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 GLRX3O76003 335 aaKnown RBP23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 MAP3K9P80192 1104 aa23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 PPP2R3AQ06190 1150 aa23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 DEF6Q9H4E7 631 aa23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 PDE11AQ9HCR9 933 aa23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 RCOR1Q9UKL0 485 aa23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 SLIT1O75093 1534 aa23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 RPS6KB1P23443 525 aa23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 POLA2Q14181 598 aa23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 DPCR1Q3MIW9 517 aa23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 ZSCAN16Q9H4T2 348 aaPredicted RBP23.84■■□□□ 1.41
TMEFF1-201ENST00000374879 APPP05067 770 aa23.83■■□□□ 1.41
TMEFF1-201ENST00000374879 FAM160A1Q05DH4 1040 aa23.83■■□□□ 1.41
TMEFF1-201ENST00000374879 MAP4K1Q92918 833 aa23.83■■□□□ 1.41
TMEFF1-201ENST00000374879 ARHGAP23Q9P227 1491 aa23.83■■□□□ 1.41
TMEFF1-201ENST00000374879 PSME1Q06323 249 aa23.83■■□□□ 1.41
TMEFF1-201ENST00000374879 NBPF6Q5VWK0 638 aa23.83■■□□□ 1.41
TMEFF1-201ENST00000374879 LTV1Q96GA3 475 aaPredicted RBP23.83■■□□□ 1.41
TMEFF1-201ENST00000374879 NBPF4Q96M43 638 aa23.83■■□□□ 1.41
TMEFF1-201ENST00000374879 SRGAP3O43295 1099 aa23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 MYCNP04198 464 aaPredicted RBP23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 PPM1EQ8WY54 764 aa23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 RABGGTAQ92696 567 aa23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 WDR24Q96S15 920 aa23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 VWA3AA6NCI4 1184 aa23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 RPS6KA5O75582 802 aa23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 APOBRQ0VD83 1088 aa23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 MCM6Q14566 821 aa23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 FSIP1Q8NA03 581 aa23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 IL17REQ8NFR9 667 aa23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 FAM227BQ96M60 508 aa23.82■■□□□ 1.4
TMEFF1-201ENST00000374879 CORO7P57737 925 aa23.81■■□□□ 1.4
TMEFF1-201ENST00000374879 MRFAP1Q9Y605 127 aa23.81■■□□□ 1.4
TMEFF1-201ENST00000374879 LRRC37A3O60309 1634 aa23.81■■□□□ 1.4
TMEFF1-201ENST00000374879 N4BP1O75113 896 aaKnown RBP23.81■■□□□ 1.4
TMEFF1-201ENST00000374879 GOLGA8FQ08AF8 430 aa23.81■■□□□ 1.4
TMEFF1-201ENST00000374879 GOLGA8DPQ0D2H9 430 aa23.81■■□□□ 1.4
TMEFF1-201ENST00000374879 CT47A1Q5JQC4 288 aaPredicted RBP23.81■■□□□ 1.4
TMEFF1-201ENST00000374879 CRYBG1Q9Y4K1 1723 aa23.81■■□□□ 1.4
TMEFF1-201ENST00000374879 MAP3K5Q99683 1374 aa23.81■■□□□ 1.4
TMEFF1-201ENST00000374879 FOSBP53539 338 aa23.8■■□□□ 1.4
TMEFF1-201ENST00000374879 MPHOSPH8Q99549 860 aa23.8■■□□□ 1.4
TMEFF1-201ENST00000374879 FAM208AQ9UK61 1670 aaKnown RBP23.8■■□□□ 1.4
TMEFF1-201ENST00000374879 XRN1Q8IZH2 1706 aaKnown RBP23.8■■□□□ 1.4
TMEFF1-201ENST00000374879 DHX8Q14562 1220 aaKnown RBP23.8■■□□□ 1.4
TMEFF1-201ENST00000374879 USP28Q96RU2 1077 aa23.8■■□□□ 1.4
TMEFF1-201ENST00000374879 SDF4Q9BRK5 362 aa23.8■■□□□ 1.4
TMEFF1-201ENST00000374879 CCDC151A5D8V7 595 aa23.8■■□□□ 1.4
TMEFF1-201ENST00000374879 ABTB2Q8N961 1025 aa23.8■■□□□ 1.4
TMEFF1-201ENST00000374879 GNG11P61952 73 aa23.79■■□□□ 1.4
TMEFF1-201ENST00000374879 FAN1Q9Y2M0 1017 aa23.79■■□□□ 1.4
TMEFF1-201ENST00000374879 USP42Q9H9J4 1324 aaKnown RBP23.79■■□□□ 1.4
TMEFF1-201ENST00000374879 CLGNO14967 610 aa23.79■■□□□ 1.4
TMEFF1-201ENST00000374879 TXLNAP40222 546 aa23.79■■□□□ 1.4
TMEFF1-201ENST00000374879 TAF7Q15545 349 aaPredicted RBP23.79■■□□□ 1.4
TMEFF1-201ENST00000374879 THEMISQ8N1K5 641 aaPredicted RBP23.79■■□□□ 1.4
TMEFF1-201ENST00000374879 GOLGA1Q92805 767 aa23.78■■□□□ 1.4
TMEFF1-201ENST00000374879 ALDH8A1Q9H2A2 487 aaPredicted RBP23.78■■□□□ 1.4
TMEFF1-201ENST00000374879 LMOD1P29536 600 aaPredicted RBP23.78■■□□□ 1.4
TMEFF1-201ENST00000374879 ME1P48163 572 aa23.78■■□□□ 1.4
TMEFF1-201ENST00000374879 FANCCQ00597 558 aa23.78■■□□□ 1.4
TMEFF1-201ENST00000374879 EP400NLQ6ZTU2 488 aa23.78■■□□□ 1.4
TMEFF1-201ENST00000374879 NWD1Q149M9 1564 aa23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 BIN1O00499 593 aa23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 KCNA6P17658 529 aa23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 NMIQ13287 307 aaPredicted RBP23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 NCAPHQ15003 741 aa23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 LRRC31Q6UY01 552 aa23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 ZSWIM4Q9H7M6 989 aa23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 PPP2R2CQ9Y2T4 447 aa23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 BRD3Q15059 726 aa23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 SUGP1Q8IWZ8 645 aaKnown RBP23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 BPIFA3Q9BQP9 254 aa23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 PLEKHA4Q9H4M7 779 aa23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 AKAP2Q9Y2D5 859 aa23.77■■□□□ 1.4
TMEFF1-201ENST00000374879 ZSCAN12O43309 604 aa23.76■■□□□ 1.39
TMEFF1-201ENST00000374879 ATP1A3P13637 1013 aa23.76■■□□□ 1.39
TMEFF1-201ENST00000374879 PTPN21Q16825 1174 aa23.76■■□□□ 1.39
TMEFF1-201ENST00000374879 JAKMIP3Q5VZ66 844 aa23.76■■□□□ 1.39
TMEFF1-201ENST00000374879 FMR1NBQ8N0W7 255 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms