RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 BPIFA3Q9BQP9 254 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 FTOQ9C0B1 505 aaKnown RBP eCLIP8.8□□□□□ -1
GARNL3-202ENST00000373387 PAXBP1Q9Y5B6 917 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 NDUFB9Q9Y6M9 179 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 TIAM2Q8IVF5 1701 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 LRP5O75197 1615 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 XIRP1Q702N8 1843 aaKnown RBP8.8□□□□□ -1
GARNL3-202ENST00000373387 USP27XA6NNY8 438 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 H7C1W4 665 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 HMGB1P09429 215 aaKnown RBP8.8□□□□□ -1
GARNL3-202ENST00000373387 KCNJ4P48050 445 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 ESCO1Q5FWF5 840 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 USP28Q96RU2 1077 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 ORAI2Q96SN7 254 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 CLIP2Q9UDT6 1046 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 SLC39A6Q13433 755 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 STX1AQ16623 288 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 TPRNQ4KMQ1 711 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 RIC3Q7Z5B4 369 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 ZNF274Q96GC6 653 aaPredicted RBP8.8□□□□□ -1
GARNL3-202ENST00000373387 OSBPL5Q9H0X9 879 aaPredicted RBP8.8□□□□□ -1
GARNL3-202ENST00000373387 TNS2Q63HR2 1409 aa8.8□□□□□ -1
GARNL3-202ENST00000373387 ANKRD13DQ6ZTN6 518 aa8.79□□□□□ -1
GARNL3-202ENST00000373387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.79□□□□□ -1
GARNL3-202ENST00000373387 CHMP3Q9Y3E7 222 aa8.79□□□□□ -1
GARNL3-202ENST00000373387 BCORQ6W2J9 1755 aa8.79□□□□□ -1
GARNL3-202ENST00000373387 ZBTB7CA1YPR0 619 aa8.79□□□□□ -1
GARNL3-202ENST00000373387 PTPDC1A2A3K4 754 aa8.79□□□□□ -1
GARNL3-202ENST00000373387 NEMFO60524 1076 aa8.79□□□□□ -1
GARNL3-202ENST00000373387 U2AF2P26368 475 aaKnown RBP eCLIP8.79□□□□□ -1
GARNL3-202ENST00000373387 FAM160A1Q05DH4 1040 aa8.79□□□□□ -1
GARNL3-202ENST00000373387 AIMP1Q12904 312 aaKnown RBP8.79□□□□□ -1
GARNL3-202ENST00000373387 ARID5BQ14865 1188 aa8.79□□□□□ -1
GARNL3-202ENST00000373387 PDIA3P30101 505 aaKnown RBP8.79□□□□□ -1
GARNL3-202ENST00000373387 TRIM5Q9C035 493 aa8.79□□□□□ -1
GARNL3-202ENST00000373387 RTEL1Q9NZ71 1219 aa8.79□□□□□ -1
GARNL3-202ENST00000373387 A0A1W2PQ27 194 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 A0A1W2PQ64 194 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 A0A1W2PQD8 194 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 KCNJ6P48051 423 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 PLCB2Q00722 1185 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 CCAR1Q8IX12 1150 aaKnown RBP8.78□□□□□ -1
GARNL3-202ENST00000373387 C16orf45Q96MC5 204 aaPredicted RBP8.78□□□□□ -1
GARNL3-202ENST00000373387 HSD3B7Q9H2F3 369 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 DDX41Q9UJV9 622 aaKnown RBP8.78□□□□□ -1
GARNL3-202ENST00000373387 MAST3O60307 1309 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 ATRNO75882 1429 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 E7EWF7 191 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 HSPD1P10809 573 aaKnown RBP8.78□□□□□ -1
GARNL3-202ENST00000373387 TNNT1P13805 278 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 NEXNQ0ZGT2 675 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 SLFNL1Q499Z3 407 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 C14orf37Q86TY3 774 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 NFATC2IPQ8NCF5 419 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 PRDM10Q9NQV6 1147 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 MORC2Q9Y6X9 1032 aaPredicted RBP8.78□□□□□ -1
GARNL3-202ENST00000373387 CBX1P83916 185 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 CHAF1AQ13111 956 aaPredicted RBP8.78□□□□□ -1
GARNL3-202ENST00000373387 PLBD2Q8NHP8 589 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 BICD2Q8TD16 824 aa8.78□□□□□ -1
GARNL3-202ENST00000373387 CYP27B1O15528 508 aa8.77□□□□□ -1
GARNL3-202ENST00000373387 SNRPA1P09661 255 aaKnown RBP8.77□□□□□ -1
GARNL3-202ENST00000373387 APOBRQ0VD83 1088 aa8.77□□□□□ -1
GARNL3-202ENST00000373387 RBM33Q96EV2 1170 aaKnown RBP8.77□□□□□ -1
GARNL3-202ENST00000373387 HPS5Q9UPZ3 1129 aa8.77□□□□□ -1
GARNL3-202ENST00000373387 MYL6BP14649 208 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 NAA30Q147X3 362 aaPredicted RBP8.77□□□□□ -1.01
GARNL3-202ENST00000373387 NCAPHQ15003 741 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 CCDC93Q567U6 631 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 ADALQ6DHV7 355 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 DDX46Q7L014 1031 aaKnown RBP8.77□□□□□ -1.01
GARNL3-202ENST00000373387 LRRC2Q9BYS8 371 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 OGFRQ9NZT2 677 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 PCDHA7Q9UN72 937 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 NBPF26B4DH59 902 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 NBPF14Q5TI25 921 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 NBPF10Q6P3W6 841 aaKnown RBP8.77□□□□□ -1.01
GARNL3-202ENST00000373387 UBE3BQ7Z3V4 1068 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 ANKLE2Q86XL3 938 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 CCAR2Q8N163 923 aaKnown RBP8.77□□□□□ -1.01
GARNL3-202ENST00000373387 NBPF15Q8N660 670 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 LINC00301Q8NCQ3 95 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 L2HGDHQ9H9P8 463 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 ATG3Q9NT62 314 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 PAG1Q9NWQ8 432 aa8.77□□□□□ -1.01
GARNL3-202ENST00000373387 CIAO1O76071 339 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 POLR3EQ9NVU0 708 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 FAM237AA0A1B0GTK4 181 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 GOLGA6L4A6NEF3 574 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 M0R2C6 588 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 KIF20AO95235 890 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 CEP135Q66GS9 1140 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 IMPACTQ9P2X3 320 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 WDR19Q8NEZ3 1342 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 ABCC12Q96J65 1359 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 A0A1B0GUL6 1792 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 AXDND1Q5T1B0 1012 aaPredicted RBP8.76□□□□□ -1.01
GARNL3-202ENST00000373387 MB21D2Q8IYB1 491 aaPredicted RBP8.76□□□□□ -1.01
GARNL3-202ENST00000373387 KIF18AQ8NI77 898 aa8.76□□□□□ -1.01
GARNL3-202ENST00000373387 DCAF5Q96JK2 942 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms