RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PPFIA3O75145 1194 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 PHKG2P15735 406 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 PTMSP20962 102 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 ME3Q16798 604 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 LRSAM1Q6UWE0 723 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 CCDC129Q6ZRS4 1044 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 KIAA1211Q6ZU35 1233 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 UBE3BQ7Z3V4 1068 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 LRP10Q7Z4F1 713 aa7.64□□□□□ -1.19
CHD6-202ENST00000373222 INTS4Q96HW7 963 aaKnown RBP7.64□□□□□ -1.19
CHD6-202ENST00000373222 ISY1Q9ULR0 285 aaKnown RBP7.64□□□□□ -1.19
CHD6-202ENST00000373222 RBM8AQ9Y5S9 174 aaKnown RBP7.64□□□□□ -1.19
CHD6-202ENST00000373222 ADAMTS7Q9UKP4 1686 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 ALDH1L1O75891 902 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 CCDC173Q0VFZ6 552 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 GCKRQ14397 625 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 FERMT3Q86UX7 667 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 IL17RAQ96F46 866 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 CRISPLD2Q9H0B8 497 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 TPCN1Q9ULQ1 816 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 PPME1Q9Y570 386 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 TTC41PQ6P2S7 1318 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 USP42Q9H9J4 1324 aaKnown RBP7.63□□□□□ -1.19
CHD6-202ENST00000373222 COL18A1P39060 1754 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 ARFGEF2Q9Y6D5 1785 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 A0A0G2JLW4 131 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 GJB2P29033 226 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 MCM2P49736 904 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 DNM1Q05193 864 aaKnown RBP7.63□□□□□ -1.19
CHD6-202ENST00000373222 STK3Q13188 491 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 NECTIN1Q15223 517 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 FBXO22Q8NEZ5 403 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 DBNLQ9UJU6 430 aaKnown RBP7.63□□□□□ -1.19
CHD6-202ENST00000373222 LIMCH1Q9UPQ0 1083 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 CHMP3Q9Y3E7 222 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 CCDC171Q6TFL3 1326 aa7.63□□□□□ -1.19
CHD6-202ENST00000373222 TMEM88BA6NKF7 163 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 STX6O43752 255 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 KCNJ4P48050 445 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 HSPA2P54652 639 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 TFCP2Q12800 502 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 G3BP1Q13283 466 aaKnown RBP eCLIP7.62□□□□□ -1.19
CHD6-202ENST00000373222 CREB3L3Q68CJ9 461 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 MICAL1Q8TDZ2 1067 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 FSD1Q9BTV5 496 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 PDRG1Q9NUG6 133 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 GNEQ9Y223 722 aaKnown RBP7.62□□□□□ -1.19
CHD6-202ENST00000373222 TMEM94Q12767 1356 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 VPS37CA5D8V6 355 aaPredicted RBP7.62□□□□□ -1.19
CHD6-202ENST00000373222 ZSCAN22P10073 491 aaPredicted RBP7.62□□□□□ -1.19
CHD6-202ENST00000373222 HSP90AB4PQ58FF6 505 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 LRRC2Q9BYS8 371 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 C19orf44Q9H6X5 657 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 SUGT1Q9Y2Z0 365 aa7.62□□□□□ -1.19
CHD6-202ENST00000373222 UTYO14607 1347 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 WDR33Q9C0J8 1336 aaKnown RBP7.61□□□□□ -1.19
CHD6-202ENST00000373222 SLC27A2O14975 620 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 TATP17735 454 aaPredicted RBP7.61□□□□□ -1.19
CHD6-202ENST00000373222 PTPN12Q05209 780 aaKnown RBP7.61□□□□□ -1.19
CHD6-202ENST00000373222 TTLL7Q6ZT98 887 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 DNAJC2Q99543 621 aaKnown RBP7.61□□□□□ -1.19
CHD6-202ENST00000373222 DBNDD2Q9BQY9 259 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 SMC3Q9UQE7 1217 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 GLI3P10071 1580 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 MST1RQ04912 1400 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 NBPF26B4DH59 902 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 RFX5P48382 616 aaPredicted RBP7.61□□□□□ -1.19
CHD6-202ENST00000373222 ARSIQ5FYB1 569 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 NBPF14Q5TI25 921 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 NBPF10Q6P3W6 841 aaKnown RBP7.61□□□□□ -1.19
CHD6-202ENST00000373222 DDX46Q7L014 1031 aaKnown RBP7.61□□□□□ -1.19
CHD6-202ENST00000373222 CDC37L1Q7L3B6 337 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 NBPF15Q8N660 670 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 EVI5LQ96CN4 794 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 ZNF594Q96JF6 807 aaPredicted RBP7.61□□□□□ -1.19
CHD6-202ENST00000373222 PDLIM2Q96JY6 352 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 ZNF830Q96NB3 372 aaPredicted RBP7.61□□□□□ -1.19
CHD6-202ENST00000373222 METTL22Q9BUU2 404 aaPredicted RBP7.61□□□□□ -1.19
CHD6-202ENST00000373222 MTMR6Q9Y217 621 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 LAMA4Q16363 1823 aa7.61□□□□□ -1.19
CHD6-202ENST00000373222 A0A087WZG4 1122 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 A0A0G2JS52 829 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 DDX58O95786 925 aaKnown RBP7.6□□□□□ -1.19
CHD6-202ENST00000373222 F13A1P00488 732 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 A1BGP04217 495 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 PDAP1Q13442 181 aaKnown RBP7.6□□□□□ -1.19
CHD6-202ENST00000373222 LARP1Q6PKG0 1096 aaKnown RBP7.6□□□□□ -1.19
CHD6-202ENST00000373222 ZSCAN30Q86W11 494 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 MAP4K1Q92918 833 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 CCDC85AQ96PX6 553 aaPredicted RBP7.6□□□□□ -1.19
CHD6-202ENST00000373222 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.6□□□□□ -1.19
CHD6-202ENST00000373222 POLR3EQ9NVU0 708 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 HCLS1P14317 486 aaPredicted RBP7.6□□□□□ -1.19
CHD6-202ENST00000373222 ATF3P18847 181 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 FOSBP53539 338 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 FGD1P98174 961 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 NEXNQ0ZGT2 675 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 TOB2Q14106 344 aaPredicted RBP7.6□□□□□ -1.19
CHD6-202ENST00000373222 TEX2Q8IWB9 1127 aa7.6□□□□□ -1.19
CHD6-202ENST00000373222 EXOC8Q8IYI6 725 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms