RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 AKNAD1Q5T1N1 836 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 GIGYF2Q6Y7W6 1299 aaKnown RBP27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 STXBP4Q6ZWJ1 553 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 SNX21Q969T3 373 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 RALGAPBQ86X10 1494 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 DNAJC21Q5F1R6 531 aaKnown RBP27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 CCDC174Q6PII3 467 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 RHOXF2BP0C7M4 288 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 ATP6V1AP38606 617 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 SYT10Q6XYQ8 523 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 MAGEB6Q8N7X4 407 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 RHOXF2Q9BQY4 288 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 ARFGAP3Q9NP61 516 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 GUCA1BQ9UMX6 200 aa27.24■■□□□ 1.95
RAPGEF1-203ENST00000372195 CKAP4Q07065 602 aaKnown RBP27.23■■□□□ 1.95
RAPGEF1-203ENST00000372195 UBXN1Q04323 297 aa27.23■■□□□ 1.95
RAPGEF1-203ENST00000372195 PLS1Q14651 629 aa27.23■■□□□ 1.95
RAPGEF1-203ENST00000372195 TEX13AQ9BXU3 409 aaPredicted RBP27.23■■□□□ 1.95
RAPGEF1-203ENST00000372195 WWC3Q9ULE0 1092 aa27.23■■□□□ 1.95
RAPGEF1-203ENST00000372195 CUL7Q14999 1698 aa27.23■■□□□ 1.95
RAPGEF1-203ENST00000372195 THOC2Q8NI27 1593 aaKnown RBP27.23■■□□□ 1.95
RAPGEF1-203ENST00000372195 EHBP1Q8NDI1 1231 aa27.23■■□□□ 1.95
RAPGEF1-203ENST00000372195 ZKSCAN5Q9Y2L8 839 aa27.23■■□□□ 1.95
RAPGEF1-203ENST00000372195 NBPF7P0C2Y1 421 aaPredicted RBP27.23■■□□□ 1.95
RAPGEF1-203ENST00000372195 NAA16Q6N069 864 aaPredicted RBP27.22■■□□□ 1.95
RAPGEF1-203ENST00000372195 PAXIP1Q6ZW49 1069 aaPredicted RBP27.22■■□□□ 1.95
RAPGEF1-203ENST00000372195 CTAGE9A4FU28 777 aa27.22■■□□□ 1.95
RAPGEF1-203ENST00000372195 MAGEB6P1A0A0J9YX57 407 aa27.21■■□□□ 1.95
RAPGEF1-203ENST00000372195 KSR2Q6VAB6 950 aa27.21■■□□□ 1.95
RAPGEF1-203ENST00000372195 SPECC1LQ69YQ0 1117 aa27.21■■□□□ 1.95
RAPGEF1-203ENST00000372195 UBE2Q2Q8WVN8 375 aa27.21■■□□□ 1.95
RAPGEF1-203ENST00000372195 SYNCQ9H7C4 482 aa27.21■■□□□ 1.95
RAPGEF1-203ENST00000372195 PTPDC1A2A3K4 754 aa27.21■■□□□ 1.95
RAPGEF1-203ENST00000372195 ECM2O94769 699 aaPredicted RBP27.21■■□□□ 1.95
RAPGEF1-203ENST00000372195 DPH6Q7L8W6 267 aa27.21■■□□□ 1.95
RAPGEF1-203ENST00000372195 PLEKHM2Q8IWE5 1019 aa27.21■■□□□ 1.95
RAPGEF1-203ENST00000372195 PPP1R14CQ8TAE6 165 aa27.21■■□□□ 1.95
RAPGEF1-203ENST00000372195 PHACTR2O75167 634 aa27.2■■□□□ 1.95
RAPGEF1-203ENST00000372195 RUFY3Q7L099 469 aa27.2■■□□□ 1.95
RAPGEF1-203ENST00000372195 CAVIN2O95810 425 aa27.2■■□□□ 1.95
RAPGEF1-203ENST00000372195 ZNF569Q5MCW4 686 aa27.2■■□□□ 1.95
RAPGEF1-203ENST00000372195 PUS7Q96PZ0 661 aaKnown RBP27.2■■□□□ 1.95
RAPGEF1-203ENST00000372195 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.2■■□□□ 1.95
RAPGEF1-203ENST00000372195 CCDC129Q6ZRS4 1044 aa27.2■■□□□ 1.94
RAPGEF1-203ENST00000372195 CNNM2Q9H8M5 875 aa27.2■■□□□ 1.94
RAPGEF1-203ENST00000372195 IFI16Q16666 785 aaKnown RBP27.2■■□□□ 1.94
RAPGEF1-203ENST00000372195 ABCA10Q8WWZ4 1543 aa27.2■■□□□ 1.94
RAPGEF1-203ENST00000372195 SELENOSQ9BQE4 189 aa27.19■■□□□ 1.94
RAPGEF1-203ENST00000372195 LRRC27Q9C0I9 530 aa27.19■■□□□ 1.94
RAPGEF1-203ENST00000372195 VPS18Q9P253 973 aa27.19■■□□□ 1.94
RAPGEF1-203ENST00000372195 GSTO1P78417 241 aa27.19■■□□□ 1.94
RAPGEF1-203ENST00000372195 CABLES1Q8TDN4 633 aa27.19■■□□□ 1.94
RAPGEF1-203ENST00000372195 ZCRB1Q8TBF4 217 aaKnown RBP27.19■■□□□ 1.94
RAPGEF1-203ENST00000372195 ATRIPQ8WXE1 791 aa27.19■■□□□ 1.94
RAPGEF1-203ENST00000372195 IKBKGQ9Y6K9 419 aa27.19■■□□□ 1.94
RAPGEF1-203ENST00000372195 MSH6P52701 1360 aa27.19■■□□□ 1.94
RAPGEF1-203ENST00000372195 CCDC155Q8N6L0 562 aa27.19■■□□□ 1.94
RAPGEF1-203ENST00000372195 BICC1Q9H694 974 aaKnown RBP27.19■■□□□ 1.94
RAPGEF1-203ENST00000372195 ZFYP08048 801 aaPredicted RBP27.18■■□□□ 1.94
RAPGEF1-203ENST00000372195 KRT2P35908 639 aa27.18■■□□□ 1.94
RAPGEF1-203ENST00000372195 GTF2A1P52655 376 aaPredicted RBP27.18■■□□□ 1.94
RAPGEF1-203ENST00000372195 NFATC2IPQ8NCF5 419 aa27.18■■□□□ 1.94
RAPGEF1-203ENST00000372195 TTC21AQ8NDW8 1320 aa27.18■■□□□ 1.94
RAPGEF1-203ENST00000372195 SLU7O95391 586 aaKnown RBP27.18■■□□□ 1.94
RAPGEF1-203ENST00000372195 A0A1B0GVL5 298 aa27.18■■□□□ 1.94
RAPGEF1-203ENST00000372195 ST5P78524 1137 aa27.18■■□□□ 1.94
RAPGEF1-203ENST00000372195 IFT81Q8WYA0 676 aa27.18■■□□□ 1.94
RAPGEF1-203ENST00000372195 RNF113AO15541 343 aaKnown RBP27.17■■□□□ 1.94
RAPGEF1-203ENST00000372195 ZBTB21Q9ULJ3 1066 aa27.17■■□□□ 1.94
RAPGEF1-203ENST00000372195 NIP7Q9Y221 180 aaKnown RBP eCLIP27.17■■□□□ 1.94
RAPGEF1-203ENST00000372195 GOLGA1Q92805 767 aa27.17■■□□□ 1.94
RAPGEF1-203ENST00000372195 PSMA7O14818 248 aa27.17■■□□□ 1.94
RAPGEF1-203ENST00000372195 ERMNQ8TAM6 284 aa27.17■■□□□ 1.94
RAPGEF1-203ENST00000372195 PHACTR3Q96KR7 559 aa27.17■■□□□ 1.94
RAPGEF1-203ENST00000372195 OTUD7AQ8TE49 926 aaPredicted RBP27.16■■□□□ 1.94
RAPGEF1-203ENST00000372195 FAM212AQ96EL1 285 aa27.16■■□□□ 1.94
RAPGEF1-203ENST00000372195 FANCAO15360 1455 aa27.16■■□□□ 1.94
RAPGEF1-203ENST00000372195 UTP14AQ9BVJ6 771 aaKnown RBP27.16■■□□□ 1.94
RAPGEF1-203ENST00000372195 VAMP4O75379 141 aa27.16■■□□□ 1.94
RAPGEF1-203ENST00000372195 GSTA5Q7RTV2 222 aa27.16■■□□□ 1.94
RAPGEF1-203ENST00000372195 MICALL1Q8N3F8 863 aa27.16■■□□□ 1.94
RAPGEF1-203ENST00000372195 SELENOOQ9BVL4 669 aa27.16■■□□□ 1.94
RAPGEF1-203ENST00000372195 USP26Q9BXU7 913 aa27.16■■□□□ 1.94
RAPGEF1-203ENST00000372195 CHMLP26374 656 aa27.15■■□□□ 1.94
RAPGEF1-203ENST00000372195 MAPKBP1O60336 1514 aa27.15■■□□□ 1.94
RAPGEF1-203ENST00000372195 TACC1O75410 805 aa27.15■■□□□ 1.94
RAPGEF1-203ENST00000372195 IL15P40933 162 aaPredicted RBP27.15■■□□□ 1.94
RAPGEF1-203ENST00000372195 POLKQ9UBT6 870 aa27.15■■□□□ 1.94
RAPGEF1-203ENST00000372195 TRIM75PA6NK02 468 aa27.15■■□□□ 1.94
RAPGEF1-203ENST00000372195 EEF2P13639 858 aaKnown RBP27.14■■□□□ 1.94
RAPGEF1-203ENST00000372195 CCT6AP40227 531 aaKnown RBP27.14■■□□□ 1.94
RAPGEF1-203ENST00000372195 AKAP4Q5JQC9 854 aa27.14■■□□□ 1.94
RAPGEF1-203ENST00000372195 TMTC2Q8N394 836 aa27.14■■□□□ 1.94
RAPGEF1-203ENST00000372195 SETDB2Q96T68 719 aa27.14■■□□□ 1.94
RAPGEF1-203ENST00000372195 MXRA7P84157 204 aa27.14■■□□□ 1.93
RAPGEF1-203ENST00000372195 CCDC50Q8IVM0 306 aa27.14■■□□□ 1.93
RAPGEF1-203ENST00000372195 CAPN2P17655 700 aa27.13■■□□□ 1.93
RAPGEF1-203ENST00000372195 ZNF354CQ86Y25 554 aa27.13■■□□□ 1.93
RAPGEF1-203ENST00000372195 DCTPP1Q9H773 170 aa27.13■■□□□ 1.93
RAPGEF1-203ENST00000372195 TNNI2P48788 182 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms