RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 RABEP1Q15276 862 aa31.71■■■□□ 2.67
ATPAF1-202ENST00000371937 TTF1Q15361 905 aaPredicted RBP31.71■■■□□ 2.67
ATPAF1-202ENST00000371937 ANTXR1Q9H6X2 564 aa31.7■■■□□ 2.67
ATPAF1-202ENST00000371937 A0A1B0GUL6 1792 aa31.7■■■□□ 2.67
ATPAF1-202ENST00000371937 MMP10P09238 476 aa31.7■■■□□ 2.66
ATPAF1-202ENST00000371937 BRIP1Q9BX63 1249 aa31.7■■■□□ 2.66
ATPAF1-202ENST00000371937 NRXN2Q9P2S2 1712 aa31.69■■■□□ 2.66
ATPAF1-202ENST00000371937 QSER1Q2KHR3 1735 aa31.69■■■□□ 2.66
ATPAF1-202ENST00000371937 MED23Q9ULK4 1368 aa31.68■■■□□ 2.66
ATPAF1-202ENST00000371937 ZFYP08048 801 aaPredicted RBP31.68■■■□□ 2.66
ATPAF1-202ENST00000371937 HOXA10P31260 410 aaPredicted RBP31.68■■■□□ 2.66
ATPAF1-202ENST00000371937 HSPA4P34932 840 aa31.68■■■□□ 2.66
ATPAF1-202ENST00000371937 CCDC125Q86Z20 511 aa31.68■■■□□ 2.66
ATPAF1-202ENST00000371937 SNX21Q969T3 373 aa31.68■■■□□ 2.66
ATPAF1-202ENST00000371937 KCNJ4P48050 445 aa31.68■■■□□ 2.66
ATPAF1-202ENST00000371937 MCMDC2Q4G0Z9 681 aa31.68■■■□□ 2.66
ATPAF1-202ENST00000371937 DEFB132Q7Z7B7 95 aa31.68■■■□□ 2.66
ATPAF1-202ENST00000371937 TBC1D2Q9BYX2 928 aa31.68■■■□□ 2.66
ATPAF1-202ENST00000371937 HELLSQ9NRZ9 838 aa31.68■■■□□ 2.66
ATPAF1-202ENST00000371937 AKAP11Q9UKA4 1901 aa31.67■■■□□ 2.66
ATPAF1-202ENST00000371937 CCDC171Q6TFL3 1326 aa31.67■■■□□ 2.66
ATPAF1-202ENST00000371937 RNF113AO15541 343 aaKnown RBP31.67■■■□□ 2.66
ATPAF1-202ENST00000371937 BCAMP50895 628 aa31.66■■■□□ 2.66
ATPAF1-202ENST00000371937 CAVIN4Q5BKX8 364 aa31.66■■■□□ 2.66
ATPAF1-202ENST00000371937 PI16Q6UXB8 463 aa31.66■■■□□ 2.66
ATPAF1-202ENST00000371937 GNL3LQ9NVN8 582 aaKnown RBP31.66■■■□□ 2.66
ATPAF1-202ENST00000371937 SLC4A3P48751 1232 aa31.65■■■□□ 2.66
ATPAF1-202ENST00000371937 HSCBQ8IWL3 235 aa31.65■■■□□ 2.66
ATPAF1-202ENST00000371937 SPATA5Q8NB90 893 aa31.65■■■□□ 2.66
ATPAF1-202ENST00000371937 CRAMP1Q96RY5 1269 aa31.65■■■□□ 2.66
ATPAF1-202ENST00000371937 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.65■■■□□ 2.66
ATPAF1-202ENST00000371937 HMG20BQ9P0W2 317 aa31.65■■■□□ 2.66
ATPAF1-202ENST00000371937 BBOX1O75936 387 aa31.65■■■□□ 2.66
ATPAF1-202ENST00000371937 IL17RAQ96F46 866 aa31.65■■■□□ 2.66
ATPAF1-202ENST00000371937 CYP2E1P05181 493 aaPredicted RBP31.64■■■□□ 2.66
ATPAF1-202ENST00000371937 ZMYM1Q5SVZ6 1142 aa31.64■■■□□ 2.66
ATPAF1-202ENST00000371937 MSL1Q68DK7 614 aa31.64■■■□□ 2.66
ATPAF1-202ENST00000371937 ZSCAN25Q6NSZ9 544 aa31.64■■■□□ 2.66
ATPAF1-202ENST00000371937 PTH1RQ03431 593 aa31.63■■■□□ 2.65
ATPAF1-202ENST00000371937 RASGRF1Q13972 1273 aa31.63■■■□□ 2.65
ATPAF1-202ENST00000371937 ZNF804BA4D1E1 1349 aa31.63■■■□□ 2.65
ATPAF1-202ENST00000371937 MAP4K1Q92918 833 aa31.63■■■□□ 2.65
ATPAF1-202ENST00000371937 PDE6BP35913 854 aa31.62■■■□□ 2.65
ATPAF1-202ENST00000371937 ZNF589Q86UQ0 364 aaPredicted RBP31.62■■■□□ 2.65
ATPAF1-202ENST00000371937 TMC4Q7Z404 712 aa31.61■■■□□ 2.65
ATPAF1-202ENST00000371937 VPS37DQ86XT2 251 aa31.61■■■□□ 2.65
ATPAF1-202ENST00000371937 IL27Q8NEV9 243 aa31.61■■■□□ 2.65
ATPAF1-202ENST00000371937 ANKIB1Q9P2G1 1089 aa31.61■■■□□ 2.65
ATPAF1-202ENST00000371937 PALD1Q9ULE6 856 aa31.61■■■□□ 2.65
ATPAF1-202ENST00000371937 LEMD3Q9Y2U8 911 aa31.61■■■□□ 2.65
ATPAF1-202ENST00000371937 GYG1P46976 350 aa31.6■■■□□ 2.65
ATPAF1-202ENST00000371937 XDHP47989 1333 aa31.6■■■□□ 2.65
ATPAF1-202ENST00000371937 CHGBP05060 677 aa31.59■■■□□ 2.65
ATPAF1-202ENST00000371937 ERICH6Q7L0X2 663 aa31.59■■■□□ 2.65
ATPAF1-202ENST00000371937 FAM84BQ96KN1 310 aaPredicted RBP31.59■■■□□ 2.65
ATPAF1-202ENST00000371937 SEC62Q99442 399 aaKnown RBP31.59■■■□□ 2.65
ATPAF1-202ENST00000371937 ANKRD31Q8N7Z5 1873 aa31.59■■■□□ 2.65
ATPAF1-202ENST00000371937 WTIPA6NIX2 430 aaPredicted RBP31.59■■■□□ 2.65
ATPAF1-202ENST00000371937 ST18O60284 1047 aa31.58■■■□□ 2.65
ATPAF1-202ENST00000371937 NPR1P16066 1061 aa31.58■■■□□ 2.65
ATPAF1-202ENST00000371937 FBXO33Q7Z6M2 555 aa31.58■■■□□ 2.65
ATPAF1-202ENST00000371937 PIH1D3Q9NQM4 214 aaKnown RBP31.58■■■□□ 2.65
ATPAF1-202ENST00000371937 RBM8AQ9Y5S9 174 aaKnown RBP31.58■■■□□ 2.65
ATPAF1-202ENST00000371937 SRGNP10124 158 aa31.57■■■□□ 2.64
ATPAF1-202ENST00000371937 NECTIN1Q15223 517 aa31.57■■■□□ 2.64
ATPAF1-202ENST00000371937 SEMA3EO15041 775 aa31.56■■■□□ 2.64
ATPAF1-202ENST00000371937 APPBP2Q92624 585 aa31.56■■■□□ 2.64
ATPAF1-202ENST00000371937 IDH1O75874 414 aaKnown RBP31.56■■■□□ 2.64
ATPAF1-202ENST00000371937 WASHC4Q2M389 1173 aa31.56■■■□□ 2.64
ATPAF1-202ENST00000371937 ZKSCAN1P17029 563 aaPredicted RBP31.55■■■□□ 2.64
ATPAF1-202ENST00000371937 MAP3K12Q12852 859 aa31.55■■■□□ 2.64
ATPAF1-202ENST00000371937 SLC9C2Q5TAH2 1124 aa31.55■■■□□ 2.64
ATPAF1-202ENST00000371937 RNF20Q5VTR2 975 aa31.55■■■□□ 2.64
ATPAF1-202ENST00000371937 CCDC129Q6ZRS4 1044 aa31.55■■■□□ 2.64
ATPAF1-202ENST00000371937 KCNB2Q92953 911 aa31.55■■■□□ 2.64
ATPAF1-202ENST00000371937 DENND2AQ9ULE3 1009 aa31.55■■■□□ 2.64
ATPAF1-202ENST00000371937 SNX14Q9Y5W7 946 aa31.55■■■□□ 2.64
ATPAF1-202ENST00000371937 MYH7P12883 1935 aa31.55■■■□□ 2.64
ATPAF1-202ENST00000371937 ALDH1B1P30837 517 aa31.54■■■□□ 2.64
ATPAF1-202ENST00000371937 HIBADHP31937 336 aaKnown RBP31.54■■■□□ 2.64
ATPAF1-202ENST00000371937 ADD2P35612 726 aa31.54■■■□□ 2.64
ATPAF1-202ENST00000371937 UBE3CQ15386 1083 aa31.54■■■□□ 2.64
ATPAF1-202ENST00000371937 PRPF40BQ6NWY9 871 aaKnown RBP31.54■■■□□ 2.64
ATPAF1-202ENST00000371937 ILDR1Q86SU0 546 aaPredicted RBP31.54■■■□□ 2.64
ATPAF1-202ENST00000371937 MAST3O60307 1309 aa31.54■■■□□ 2.64
ATPAF1-202ENST00000371937 SLFNL1Q499Z3 407 aa31.54■■■□□ 2.64
ATPAF1-202ENST00000371937 OSBP2Q969R2 916 aa31.54■■■□□ 2.64
ATPAF1-202ENST00000371937 ZBTB22O15209 634 aa31.53■■■□□ 2.64
ATPAF1-202ENST00000371937 U3KPZ7 1027 aaPredicted RBP31.53■■■□□ 2.64
ATPAF1-202ENST00000371937 MASTLQ96GX5 879 aa31.52■■■□□ 2.64
ATPAF1-202ENST00000371937 DSCC1Q9BVC3 393 aa31.52■■■□□ 2.64
ATPAF1-202ENST00000371937 ATP2B4P23634 1241 aa31.52■■■□□ 2.64
ATPAF1-202ENST00000371937 KLRK1P26718 216 aa31.52■■■□□ 2.64
ATPAF1-202ENST00000371937 NEK4P51957 841 aa31.52■■■□□ 2.64
ATPAF1-202ENST00000371937 CREB3L3Q68CJ9 461 aa31.52■■■□□ 2.64
ATPAF1-202ENST00000371937 RASEFQ8IZ41 740 aa31.52■■■□□ 2.64
ATPAF1-202ENST00000371937 SLC16A10Q8TF71 515 aa31.52■■■□□ 2.64
ATPAF1-202ENST00000371937 NSFL1CQ9UNZ2 370 aaKnown RBP31.52■■■□□ 2.64
ATPAF1-202ENST00000371937 PDS5AQ29RF7 1337 aaKnown RBP31.51■■■□□ 2.63
ATPAF1-202ENST00000371937 K7ELQ4 463 aaPredicted RBP31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms