RNA–Protein interactions for RNA: ENST00000371717.7

PMPCA-201, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCA, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-201ENST00000371717 SALL1Q9NSC2 1324 aa24.65■■□□□ 1.54
PMPCA-201ENST00000371717 KINO60870 393 aaKnown RBP24.65■■□□□ 1.54
PMPCA-201ENST00000371717 UBE3BQ7Z3V4 1068 aa24.65■■□□□ 1.54
PMPCA-201ENST00000371717 ENGASEQ8NFI3 743 aa24.65■■□□□ 1.54
PMPCA-201ENST00000371717 RAPGEF4Q8WZA2 1011 aa24.65■■□□□ 1.54
PMPCA-201ENST00000371717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.65■■□□□ 1.548e-7■■□□□ 13.3
PMPCA-201ENST00000371717 SOS2Q07890 1332 aaPredicted RBP24.64■■□□□ 1.54
PMPCA-201ENST00000371717 DDX46Q7L014 1031 aaKnown RBP24.64■■□□□ 1.54
PMPCA-201ENST00000371717 ZNF496Q96IT1 587 aaPredicted RBP24.64■■□□□ 1.54
PMPCA-201ENST00000371717 GOLPH3LQ9H4A5 285 aa24.64■■□□□ 1.53
PMPCA-201ENST00000371717 GPR108Q9NPR9 543 aa24.64■■□□□ 1.53
PMPCA-201ENST00000371717 NDUFB9Q9Y6M9 179 aa24.64■■□□□ 1.53
PMPCA-201ENST00000371717 LAMA4Q16363 1823 aa24.63■■□□□ 1.53
PMPCA-201ENST00000371717 BECN2A8MW95 431 aa24.63■■□□□ 1.53
PMPCA-201ENST00000371717 PHKG2P15735 406 aa24.63■■□□□ 1.53
PMPCA-201ENST00000371717 NFATC2IPQ8NCF5 419 aa24.63■■□□□ 1.53
PMPCA-201ENST00000371717 ZNF274Q96GC6 653 aaPredicted RBP24.63■■□□□ 1.53
PMPCA-201ENST00000371717 USP28Q96RU2 1077 aa24.63■■□□□ 1.53
PMPCA-201ENST00000371717 LRRC2Q9BYS8 371 aa24.63■■□□□ 1.53
PMPCA-201ENST00000371717 AFDNP55196 1824 aaKnown RBP24.63■■□□□ 1.53
PMPCA-201ENST00000371717 PLEKHG2Q9H7P9 1386 aa24.63■■□□□ 1.53
PMPCA-201ENST00000371717 CASP7P55210 303 aa24.63■■□□□ 1.53
PMPCA-201ENST00000371717 CEBPZQ03701 1054 aaKnown RBP24.63■■□□□ 1.53
PMPCA-201ENST00000371717 CEP135Q66GS9 1140 aa24.63■■□□□ 1.53
PMPCA-201ENST00000371717 KCND1Q9NSA2 647 aa24.63■■□□□ 1.53
PMPCA-201ENST00000371717 CGNQ9P2M7 1197 aaKnown RBP24.63■■□□□ 1.53
PMPCA-201ENST00000371717 ABCC6O95255 1503 aa24.62■■□□□ 1.53
PMPCA-201ENST00000371717 A0A087WZG4 1122 aa24.61■■□□□ 1.53
PMPCA-201ENST00000371717 CHGBP05060 677 aa24.61■■□□□ 1.53
PMPCA-201ENST00000371717 APOBRQ0VD83 1088 aa24.61■■□□□ 1.53
PMPCA-201ENST00000371717 FBXL16Q8N461 479 aa24.61■■□□□ 1.53
PMPCA-201ENST00000371717 U2AF2P26368 475 aaKnown RBP eCLIP24.61■■□□□ 1.53
PMPCA-201ENST00000371717 ZMYM1Q5SVZ6 1142 aa24.61■■□□□ 1.53
PMPCA-201ENST00000371717 DHX40Q8IX18 779 aaKnown RBP24.61■■□□□ 1.53
PMPCA-201ENST00000371717 CEP57L1Q8IYX8 460 aa24.61■■□□□ 1.53
PMPCA-201ENST00000371717 NAT10Q9H0A0 1025 aaKnown RBP24.61■■□□□ 1.53
PMPCA-201ENST00000371717 PAG1Q9NWQ8 432 aa24.61■■□□□ 1.53
PMPCA-201ENST00000371717 OGFRQ9NZT2 677 aa24.61■■□□□ 1.53
PMPCA-201ENST00000371717 RGPD5Q99666 1765 aa24.61■■□□□ 1.53
PMPCA-201ENST00000371717 TATP17735 454 aaPredicted RBP24.6■■□□□ 1.53
PMPCA-201ENST00000371717 USP16Q9Y5T5 823 aa24.6■■□□□ 1.53
PMPCA-201ENST00000371717 ARFGEF2Q9Y6D5 1785 aa24.6■■□□□ 1.53
PMPCA-201ENST00000371717 NYAP1Q6ZVC0 841 aa24.6■■□□□ 1.53
PMPCA-201ENST00000371717 TTC5Q8N0Z6 440 aa24.6■■□□□ 1.53
PMPCA-201ENST00000371717 IFNL2Q8IZJ0 200 aa24.59■■□□□ 1.53
PMPCA-201ENST00000371717 FSIP1Q8NA03 581 aa24.59■■□□□ 1.53
PMPCA-201ENST00000371717 PLBD2Q8NHP8 589 aa24.59■■□□□ 1.53
PMPCA-201ENST00000371717 FMNL2Q96PY5 1086 aa24.59■■□□□ 1.53
PMPCA-201ENST00000371717 E7EWF7 191 aa24.59■■□□□ 1.53
PMPCA-201ENST00000371717 SKILP12757 684 aa24.59■■□□□ 1.53
PMPCA-201ENST00000371717 GSDMDP57764 484 aa24.59■■□□□ 1.53
PMPCA-201ENST00000371717 FTOQ9C0B1 505 aaKnown RBP eCLIP24.59■■□□□ 1.53
PMPCA-201ENST00000371717 A0A1W2PQ27 194 aa24.58■■□□□ 1.53
PMPCA-201ENST00000371717 A0A1W2PQ64 194 aa24.58■■□□□ 1.53
PMPCA-201ENST00000371717 A0A1W2PQD8 194 aa24.58■■□□□ 1.53
PMPCA-201ENST00000371717 PDIA3P30101 505 aaKnown RBP24.58■■□□□ 1.53
PMPCA-201ENST00000371717 ME1P48163 572 aa24.58■■□□□ 1.53
PMPCA-201ENST00000371717 PRDM11Q9NQV5 511 aa24.58■■□□□ 1.53
PMPCA-201ENST00000371717 RTEL1Q9NZ71 1219 aa24.58■■□□□ 1.53
PMPCA-201ENST00000371717 CTNNA3Q9UI47 895 aa24.58■■□□□ 1.53
PMPCA-201ENST00000371717 SPDYE4A6NLX3 237 aa24.57■■□□□ 1.52
PMPCA-201ENST00000371717 EVCP57679 992 aa24.57■■□□□ 1.52
PMPCA-201ENST00000371717 PTPN14Q15678 1187 aa24.57■■□□□ 1.52
PMPCA-201ENST00000371717 LMBR1LQ6UX01 489 aa24.57■■□□□ 1.52
PMPCA-201ENST00000371717 MRPS27Q92552 414 aaKnown RBP24.57■■□□□ 1.52
PMPCA-201ENST00000371717 GOLIM4O00461 696 aa24.57■■□□□ 1.52
PMPCA-201ENST00000371717 HSPD1P10809 573 aaKnown RBP24.57■■□□□ 1.52
PMPCA-201ENST00000371717 CCZ1BP86790 482 aa24.57■■□□□ 1.52
PMPCA-201ENST00000371717 CCZ1P86791 482 aaPredicted RBP24.57■■□□□ 1.52
PMPCA-201ENST00000371717 ADALQ6DHV7 355 aa24.57■■□□□ 1.52
PMPCA-201ENST00000371717 FMR1NBQ8N0W7 255 aaPredicted RBP24.57■■□□□ 1.52
PMPCA-201ENST00000371717 CARMIL3Q8ND23 1372 aa24.56■■□□□ 1.52
PMPCA-201ENST00000371717 CCDC69A6NI79 296 aa24.56■■□□□ 1.52
PMPCA-201ENST00000371717 KIF20AO95235 890 aa24.56■■□□□ 1.52
PMPCA-201ENST00000371717 CCT2P78371 535 aaKnown RBP24.56■■□□□ 1.52
PMPCA-201ENST00000371717 ATG9AQ7Z3C6 839 aa24.56■■□□□ 1.52
PMPCA-201ENST00000371717 ILDR1Q86SU0 546 aaPredicted RBP24.56■■□□□ 1.52
PMPCA-201ENST00000371717 DCAF5Q96JK2 942 aa24.56■■□□□ 1.52
PMPCA-201ENST00000371717 IMPACTQ9P2X3 320 aa24.56■■□□□ 1.52
PMPCA-201ENST00000371717 H7C1W4 665 aa24.56■■□□□ 1.52
PMPCA-201ENST00000371717 KIF2AO00139 706 aaPredicted RBP24.56■■□□□ 1.52
PMPCA-201ENST00000371717 FOXO4P98177 505 aa24.56■■□□□ 1.52
PMPCA-201ENST00000371717 BPIFA3Q9BQP9 254 aa24.56■■□□□ 1.52
PMPCA-201ENST00000371717 SPEF2Q9C093 1822 aa24.56■■□□□ 1.52
PMPCA-201ENST00000371717 ATP5J2-PTCD1G3V325 749 aa24.55■■□□□ 1.52
PMPCA-201ENST00000371717 PTCD1O75127 700 aaKnown RBP24.55■■□□□ 1.52
PMPCA-201ENST00000371717 IL15P40933 162 aaPredicted RBP24.55■■□□□ 1.52
PMPCA-201ENST00000371717 OSBPL5Q9H0X9 879 aaPredicted RBP24.55■■□□□ 1.52
PMPCA-201ENST00000371717 DHX8Q14562 1220 aaKnown RBP24.54■■□□□ 1.52
PMPCA-201ENST00000371717 ARID5BQ14865 1188 aa24.54■■□□□ 1.52
PMPCA-201ENST00000371717 NCOA5Q9HCD5 579 aaKnown RBP24.54■■□□□ 1.52
PMPCA-201ENST00000371717 PCDHA7Q9UN72 937 aa24.54■■□□□ 1.52
PMPCA-201ENST00000371717 CPDO75976 1380 aa24.54■■□□□ 1.52
PMPCA-201ENST00000371717 RNF113AO15541 343 aaKnown RBP24.54■■□□□ 1.52
PMPCA-201ENST00000371717 FOSBP53539 338 aa24.54■■□□□ 1.52
PMPCA-201ENST00000371717 NEUROD6Q96NK8 337 aa24.54■■□□□ 1.52
PMPCA-201ENST00000371717 AOPEPQ8N6M6 819 aa24.53■■□□□ 1.52
PMPCA-201ENST00000371717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.53■■□□□ 1.52
PMPCA-201ENST00000371717 MAST3O60307 1309 aa24.53■■□□□ 1.52
PMPCA-201ENST00000371717 CCAR2Q8N163 923 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms