RNA–Protein interactions for RNA: ENST00000371317.9

MCTS1-202, Transcript of MCTS1, re-initiation and release factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCTS1, Length 1,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCTS1-202ENST00000371317 TRIM6-TRIM34B2RNG4 842 aa8.67□□□□□ -1.02
MCTS1-202ENST00000371317 H7C1W4 665 aa8.67□□□□□ -1.02
MCTS1-202ENST00000371317 FAM161AQ3B820 660 aa8.67□□□□□ -1.02
MCTS1-202ENST00000371317 UBE3BQ7Z3V4 1068 aa8.67□□□□□ -1.02
MCTS1-202ENST00000371317 PACS2Q86VP3 889 aa8.67□□□□□ -1.02
MCTS1-202ENST00000371317 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.67□□□□□ -1.02
MCTS1-202ENST00000371317 RPGRQ92834 1020 aaKnown RBP8.67□□□□□ -1.02
MCTS1-202ENST00000371317 ABCC12Q96J65 1359 aa8.67□□□□□ -1.02
MCTS1-202ENST00000371317 KIF13BQ9NQT8 1826 aa8.67□□□□□ -1.02
MCTS1-202ENST00000371317 PIM2Q9P1W9 311 aa8.67□□□□□ -1.02
MCTS1-202ENST00000371317 TSKSQ9UJT2 592 aa8.67□□□□□ -1.02
MCTS1-202ENST00000371317 WWC3Q9ULE0 1092 aa8.67□□□□□ -1.02
MCTS1-202ENST00000371317 TNNQ9UQP3 1299 aa8.67□□□□□ -1.02
MCTS1-202ENST00000371317 ANKRD31Q8N7Z5 1873 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 N4BP2Q86UW6 1770 aaPredicted RBP8.66□□□□□ -1.02
MCTS1-202ENST00000371317 KLRG2A4D1S0 409 aaPredicted RBP8.66□□□□□ -1.02
MCTS1-202ENST00000371317 GRM8O00222 908 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 PLIN1O60240 522 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 PDE8AO60658 829 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 SRGNP10124 158 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 MS4A1P11836 297 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 NPR1P16066 1061 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 KCNA3P22001 575 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 MMRN1Q13201 1228 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 GPR162Q16538 588 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 DALRD3Q5D0E6 543 aaKnown RBP8.66□□□□□ -1.02
MCTS1-202ENST00000371317 INTS3Q68E01 1043 aaKnown RBP8.66□□□□□ -1.02
MCTS1-202ENST00000371317 DZIP1LQ8IYY4 767 aaKnown RBP8.66□□□□□ -1.02
MCTS1-202ENST00000371317 TTC13Q8NBP0 860 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 MASTLQ96GX5 879 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 RBM17Q96I25 401 aaKnown RBP8.66□□□□□ -1.02
MCTS1-202ENST00000371317 KIAA1468Q9P260 1216 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 RBM27Q9P2N5 1060 aaKnown RBP8.66□□□□□ -1.02
MCTS1-202ENST00000371317 FAM198AQ9UFP1 575 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 CHD4Q14839 1912 aa8.66□□□□□ -1.02
MCTS1-202ENST00000371317 PXDNLA1KZ92 1463 aa8.65□□□□□ -1.02
MCTS1-202ENST00000371317 ABCC4O15439 1325 aa8.65□□□□□ -1.02
MCTS1-202ENST00000371317 CDHR2Q9BYE9 1310 aa8.65□□□□□ -1.02
MCTS1-202ENST00000371317 CRY2Q49AN0 593 aa8.65□□□□□ -1.02
MCTS1-202ENST00000371317 STYK1Q6J9G0 422 aa8.65□□□□□ -1.02
MCTS1-202ENST00000371317 DDX46Q7L014 1031 aaKnown RBP8.65□□□□□ -1.02
MCTS1-202ENST00000371317 TTLL6Q8N841 843 aa8.65□□□□□ -1.02
MCTS1-202ENST00000371317 CNKSR1Q969H4 720 aa8.65□□□□□ -1.02
MCTS1-202ENST00000371317 USP44Q9H0E7 712 aa8.65□□□□□ -1.02
MCTS1-202ENST00000371317 BCS1LQ9Y276 419 aa8.65□□□□□ -1.02
MCTS1-202ENST00000371317 OATP04181 439 aa8.64□□□□□ -1.03
MCTS1-202ENST00000371317 NBPF7P0C2Y1 421 aaPredicted RBP8.64□□□□□ -1.03
MCTS1-202ENST00000371317 ALDH1B1P30837 517 aa8.64□□□□□ -1.03
MCTS1-202ENST00000371317 CASP7P55210 303 aa8.64□□□□□ -1.03
MCTS1-202ENST00000371317 CTSWP56202 376 aa8.64□□□□□ -1.03
MCTS1-202ENST00000371317 LSM11P83369 360 aaKnown RBP eCLIP8.64□□□□□ -1.03
MCTS1-202ENST00000371317 SF3B3Q15393 1217 aaKnown RBP8.64□□□□□ -1.03
MCTS1-202ENST00000371317 CCDC152Q4G0S7 254 aa8.64□□□□□ -1.03
MCTS1-202ENST00000371317 ITPRIPQ8IWB1 547 aa8.64□□□□□ -1.03
MCTS1-202ENST00000371317 TMEM57Q8N5G2 664 aa8.64□□□□□ -1.03
MCTS1-202ENST00000371317 PANK1Q8TE04 598 aa8.64□□□□□ -1.03
MCTS1-202ENST00000371317 CCDC102AQ96A19 550 aa8.64□□□□□ -1.03
MCTS1-202ENST00000371317 CCDC85AQ96PX6 553 aaPredicted RBP8.64□□□□□ -1.03
MCTS1-202ENST00000371317 SLC4A5Q9BY07 1137 aa8.64□□□□□ -1.03
MCTS1-202ENST00000371317 VPS9D1Q9Y2B5 631 aa8.64□□□□□ -1.03
MCTS1-202ENST00000371317 RIC1Q4ADV7 1423 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 UTYO14607 1347 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 UBTFL1P0CB47 393 aaPredicted RBP8.63□□□□□ -1.03
MCTS1-202ENST00000371317 RLBP1P12271 317 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 HOXA10P31260 410 aaPredicted RBP8.63□□□□□ -1.03
MCTS1-202ENST00000371317 PRPF40BQ6NWY9 871 aaKnown RBP8.63□□□□□ -1.03
MCTS1-202ENST00000371317 NUDT18Q6ZVK8 323 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 TTLL11Q8NHH1 800 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 TATDN2Q93075 761 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 SUCLG2Q96I99 432 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 CRAMP1Q96RY5 1269 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 PLA2G12BQ9BX93 195 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 PNMA3Q9UL41 463 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 HDAC5Q9UQL6 1122 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 CHMP3Q9Y3E7 222 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 ADGRG1Q9Y653 693 aa8.63□□□□□ -1.03
MCTS1-202ENST00000371317 DDX60Q8IY21 1712 aaKnown RBP8.63□□□□□ -1.03
MCTS1-202ENST00000371317 MYH3P11055 1940 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 CEP350Q5VT06 3117 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 TRIM66O15016 1216 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 BBOX1O75936 387 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 GNAI3P08754 354 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 YBX3P16989 372 aaKnown RBP eCLIP8.62□□□□□ -1.032e-6■□□□□ 8.5
MCTS1-202ENST00000371317 FOXO4P98177 505 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 PDE3AQ14432 1141 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 EPHA10Q5JZY3 1008 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 LMBR1LQ6UX01 489 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 MEIS3Q99687 375 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 TMX4Q9H1E5 349 aaPredicted RBP8.62□□□□□ -1.03
MCTS1-202ENST00000371317 GREM2Q9H772 168 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 SEC31BQ9NQW1 1179 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 RABGEF1Q9UJ41 708 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 KIAA1551Q9HCM1 1747 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 TNRC6CQ9HCJ0 1690 aaKnown RBP8.62□□□□□ -1.03
MCTS1-202ENST00000371317 TAF1P21675 1872 aa8.62□□□□□ -1.03
MCTS1-202ENST00000371317 SLX4Q8IY92 1834 aa8.61□□□□□ -1.03
MCTS1-202ENST00000371317 LAMB2P55268 1798 aa8.61□□□□□ -1.03
MCTS1-202ENST00000371317 COL11A2P13942 1736 aaPredicted RBP8.61□□□□□ -1.03
MCTS1-202ENST00000371317 TK2O00142 265 aa8.61□□□□□ -1.03
MCTS1-202ENST00000371317 SMAPO00193 183 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms