RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 NECTIN1Q15223 517 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 PPP1R42Q7Z4L9 355 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 AOPEPQ8N6M6 819 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 KIFC2Q96AC6 838 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 XPO4Q9C0E2 1151 aaKnown RBP10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 TNNT3P45378 269 aaPredicted RBP10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 C1orf141Q5JVX7 400 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 PNKPQ96T60 521 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 SDF4Q9BRK5 362 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 PDRG1Q9NUG6 133 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 CHGBP05060 677 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 FLIIQ13045 1269 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 HOMER1Q86YM7 354 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 LRRC59Q96AG4 307 aaKnown RBP10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 MYCBPQ99417 103 aaPredicted RBP10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 PSD3Q9NYI0 1048 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 COL15A1P39059 1388 aa10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 SOS1Q07889 1333 aaPredicted RBP10.17□□□□□ -0.78
SMARCA1-203ENST00000371123 EVCP57679 992 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 TMCO3Q6UWJ1 677 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 SPATA32Q96LK8 384 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 PUS7Q96PZ0 661 aaKnown RBP10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 ANKZF1Q9H8Y5 726 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 CCDC61Q9Y6R9 512 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 TECPR2O15040 1411 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 MAGEA9P43362 315 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 CWF19L2Q2TBE0 894 aaKnown RBP10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 ZNF530Q6P9A1 599 aaPredicted RBP10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 IRX2Q9BZI1 471 aaPredicted RBP10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 ADGRL3Q9HAR2 1447 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 ATP1A3P13637 1013 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 HAND2P61296 217 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 ETF1P62495 437 aaKnown RBP10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 KRT85P78386 507 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 DPCR1Q3MIW9 517 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 VPS53Q5VIR6 699 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 PDE11AQ9HCR9 933 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 TMEM2Q9UHN6 1383 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 LAMA4Q16363 1823 aa10.16□□□□□ -0.78
SMARCA1-203ENST00000371123 CORO7P57737 925 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 ATP8B2P98198 1209 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 EXOC4Q96A65 974 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 SRRTQ9BXP5 876 aaKnown RBP10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 INTS13Q9NVM9 706 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 RPGRIP1LQ68CZ1 1315 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 FKBP4Q02790 459 aaKnown RBP eCLIP10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 CARD10Q9BWT7 1032 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 PLEKHG1Q9ULL1 1385 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 NPHP3Q7Z494 1330 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 ALKQ9UM73 1620 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 PEAK1Q9H792 1746 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 INHBEP58166 350 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 EIF4A2Q14240 407 aaKnown RBP10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 MTHFSDQ2M296 383 aaKnown RBP10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 SLC4A8Q2Y0W8 1093 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 CCDC158Q5M9N0 1113 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 DDX19AQ9NUU7 478 aaKnown RBP10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 EID1Q9Y6B2 187 aa10.15□□□□□ -0.78
SMARCA1-203ENST00000371123 TMEM232C9JQI7 657 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 RPS6KA5O75582 802 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 MAP3K9P80192 1104 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 CCDC30Q5VVM6 783 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 ADAMTS13Q76LX8 1427 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 PSDA5PKW4 1024 aaPredicted RBP10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 LONRF2Q1L5Z9 754 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 RRP12Q5JTH9 1297 aaKnown RBP10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 BEND6Q5SZJ8 279 aaPredicted RBP10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 PDILTQ8N807 584 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 CXorf56Q9H5V9 222 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 FAN1Q9Y2M0 1017 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 ABL1P00519 1130 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 GPATCH3Q96I76 525 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 SEC62Q99442 399 aaKnown RBP10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 USP44Q9H0E7 712 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 IFNKQ9P0W0 207 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 PHLPP2Q6ZVD8 1323 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 ZC3H4Q9UPT8 1303 aaKnown RBP10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 RGPD1P0DJD0 1748 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 RAB11FIP3O75154 756 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 SMC2O95347 1197 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 CPP00450 1065 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 TMC6Q7Z403 805 aa10.14□□□□□ -0.79
SMARCA1-203ENST00000371123 EFCAB8A8MWE9 144 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 PPARDQ03181 441 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 TTC31Q49AM3 519 aaPredicted RBP10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 CNTROBQ8N137 903 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 FAM227BQ96M60 508 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 EHD4Q9H223 541 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 BRMS1Q9HCU9 246 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 MRFAP1Q9Y605 127 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 A0A1B0GUL7 405 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 KCNQ3O43525 872 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 ME1P48163 572 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 TPM4P67936 248 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 UBXN4Q92575 508 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 STRN4Q9NRL3 753 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 VPS18Q9P253 973 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 NEMFO60524 1076 aa10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 URI1O94763 535 aaPredicted RBP10.13□□□□□ -0.79
SMARCA1-203ENST00000371123 RNF20Q5VTR2 975 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms