RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 POTEJP0CG39 1038 aa13.58□□□□□ -0.23
DEPDC1-201ENST00000370966 APOBRQ0VD83 1088 aa13.58□□□□□ -0.23
DEPDC1-201ENST00000370966 TDRD12Q587J7 1177 aaKnown RBP13.58□□□□□ -0.23
DEPDC1-201ENST00000370966 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.24
DEPDC1-201ENST00000370966 ABCA8O94911 1581 aa13.58□□□□□ -0.24
DEPDC1-201ENST00000370966 CALML3P27482 149 aa13.58□□□□□ -0.24
DEPDC1-201ENST00000370966 CENPHQ9H3R5 247 aa13.58□□□□□ -0.24
DEPDC1-201ENST00000370966 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
DEPDC1-201ENST00000370966 PNMA6EA0A0J9YXQ4 647 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 TNNI3KQ59H18 835 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 FPGT-TNNI3KV9GXZ4 949 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 RTL1A6NKG5 1358 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 RPS6KB1P23443 525 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 GNG11P61952 73 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 TRAF1Q13077 416 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 LLPHQ9BRT6 129 aaKnown RBP13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 FAM193AP78312 1265 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 EHBP1Q8NDI1 1231 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 VAT1LQ9HCJ6 419 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.57□□□□□ -0.242e-8■■□□□ 13.3
DEPDC1-201ENST00000370966 MARCKSP29966 332 aaPredicted RBP13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 CETN1Q12798 172 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 NYXQ9GZU5 481 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 UBA5Q9GZZ9 404 aa13.57□□□□□ -0.24
DEPDC1-201ENST00000370966 RTL9Q8NET4 1388 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 TSPY3P0CV98 308 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 TSPY8P0CW00 308 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 NEFHP12036 1026 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 CCDC40Q4G0X9 1142 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 AOPEPQ8N6M6 819 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 LGR6Q9HBX8 967 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 SNX14Q9Y5W7 946 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 TRIM47Q96LD4 638 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 ALS2CR12Q96Q35 445 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 CABP5Q9NP86 173 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 IQSEC3Q9UPP2 1182 aaPredicted RBP13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 KDM5CP41229 1560 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 ZNF521Q96K83 1311 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 MAGEB6P1A0A0J9YX57 407 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 A0A1B0GUL7 405 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 EIF4A1P60842 406 aaKnown RBP13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 STXBP4Q6ZWJ1 553 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 CNKSR2Q8WXI2 1034 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 TPTE2Q6XPS3 522 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 TM6SF1Q9BZW5 370 aa13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 TTC12Q9H892 705 aaPredicted RBP13.56□□□□□ -0.24
DEPDC1-201ENST00000370966 SLC27A2O14975 620 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 ST5P78524 1137 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 LUZP1Q86V48 1076 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 TIMM10P62072 90 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 DBNDD2Q9BQY9 259 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 GTPBP4Q9BZE4 634 aaKnown RBP13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 SLC52A2Q9HAB3 445 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 KDM5DQ9BY66 1539 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 MYOM2P54296 1465 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 GOLGA6L7A0A1B0GV03 622 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 PSMA7O14818 248 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 DESP17661 470 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 SEPT7Q16181 437 aaKnown RBP13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 RRAGBQ5VZM2 374 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 KBTBD3Q8NAB2 608 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 SSH3Q8TE77 659 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 ZNF830Q96NB3 372 aaPredicted RBP13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 NAA15Q9BXJ9 866 aaKnown RBP13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 EXOC1Q9NV70 894 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 AATKQ6ZMQ8 1374 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 ERVK-7P63135 1459 aa13.55□□□□□ -0.24
DEPDC1-201ENST00000370966 HSPA4P34932 840 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 STAT6P42226 847 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 GCKRQ14397 625 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 BMS1Q14692 1282 aaKnown RBP13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 CHST3Q7LGC8 479 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 MYO5CQ9NQX4 1742 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 AFMP43652 599 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 CBX1P83916 185 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 CPA1P15085 419 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 ZNF445P59923 1031 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 TAF3Q5VWG9 929 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 APPBP2Q92624 585 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 TMEM87BQ96K49 555 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 PLCG2P16885 1265 aa13.54□□□□□ -0.24
DEPDC1-201ENST00000370966 TRIM21P19474 475 aaKnown RBP13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 LMOD1P29536 600 aaPredicted RBP13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 FAM160A1Q05DH4 1040 aa13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 MAGEB6Q8N7X4 407 aa13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 PLEKHF1Q96S99 279 aa13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 ORAI2Q96SN7 254 aa13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 HELBQ8NG08 1087 aaPredicted RBP13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 ERMNQ8TAM6 284 aa13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 SRRTQ9BXP5 876 aaKnown RBP13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 USP44Q9H0E7 712 aa13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 AKR1B10O60218 316 aa13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 CYLC1P35663 651 aaPredicted RBP13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 SUCLG2Q96I99 432 aa13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 SH3TC1Q8TE82 1336 aa13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 SYNMO15061 1565 aa13.53□□□□□ -0.24
DEPDC1-201ENST00000370966 SSH2Q76I76 1423 aa13.52□□□□□ -0.24
DEPDC1-201ENST00000370966 ACSBG1Q96GR2 724 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms