RNA–Protein interactions for RNA: ENST00000370503.2

SPANXN3-201, Transcript of SPANX family member N3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPANXN3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPANXN3-201ENST00000370503 CACTIN-AS1Q8N1I8 211 aa9.47□□□□□ -0.89
SPANXN3-201ENST00000370503 TRIM11Q96F44 468 aa9.47□□□□□ -0.89
SPANXN3-201ENST00000370503 POP1Q99575 1024 aaKnown RBP9.47□□□□□ -0.89
SPANXN3-201ENST00000370503 ZKSCAN3Q9BRR0 538 aa9.47□□□□□ -0.89
SPANXN3-201ENST00000370503 NPHS2Q9NP85 383 aa9.47□□□□□ -0.89
SPANXN3-201ENST00000370503 NFKBIEO00221 500 aa9.46□□□□□ -0.9
SPANXN3-201ENST00000370503 ERCC3P19447 782 aa9.46□□□□□ -0.9
SPANXN3-201ENST00000370503 IL22RA1Q8N6P7 574 aa9.46□□□□□ -0.9
SPANXN3-201ENST00000370503 TMEM102Q8N9M5 508 aaPredicted RBP9.46□□□□□ -0.9
SPANXN3-201ENST00000370503 LACRTQ9GZZ8 138 aa9.46□□□□□ -0.9
SPANXN3-201ENST00000370503 A0A1W2PP55 124 aa9.45□□□□□ -0.9
SPANXN3-201ENST00000370503 FAM177BA6PVY3 158 aa9.45□□□□□ -0.9
SPANXN3-201ENST00000370503 P4HBP07237 508 aaKnown RBP9.45□□□□□ -0.9
SPANXN3-201ENST00000370503 PTPRAP18433 802 aa9.45□□□□□ -0.9
SPANXN3-201ENST00000370503 IRS1P35568 1242 aa9.45□□□□□ -0.9
SPANXN3-201ENST00000370503 ATP2B2Q01814 1243 aa9.45□□□□□ -0.9
SPANXN3-201ENST00000370503 COL19A1Q14993 1142 aa9.45□□□□□ -0.9
SPANXN3-201ENST00000370503 SUV39H2Q9H5I1 410 aa9.45□□□□□ -0.9
SPANXN3-201ENST00000370503 NLRP2Q9NX02 1062 aa9.45□□□□□ -0.9
SPANXN3-201ENST00000370503 GADD45BO75293 160 aaPredicted RBP9.44□□□□□ -0.9
SPANXN3-201ENST00000370503 KIAA0319Q5VV43 1072 aa9.44□□□□□ -0.9
SPANXN3-201ENST00000370503 DMRTC2Q8IXT2 367 aaPredicted RBP9.44□□□□□ -0.9
SPANXN3-201ENST00000370503 NXPE3Q969Y0 559 aa9.44□□□□□ -0.9
SPANXN3-201ENST00000370503 HHIPQ96QV1 700 aa9.44□□□□□ -0.9
SPANXN3-201ENST00000370503 EHD4Q9H223 541 aa9.44□□□□□ -0.9
SPANXN3-201ENST00000370503 CDC27P30260 824 aa9.43□□□□□ -0.9
SPANXN3-201ENST00000370503 MFAP1P55081 439 aaKnown RBP9.43□□□□□ -0.9
SPANXN3-201ENST00000370503 EAPPQ56P03 285 aaPredicted RBP9.43□□□□□ -0.9
SPANXN3-201ENST00000370503 ALG1LQ6GMV1 187 aa9.43□□□□□ -0.9
SPANXN3-201ENST00000370503 EPS8L3Q8TE67 593 aaKnown RBP9.43□□□□□ -0.9
SPANXN3-201ENST00000370503 MUC3BQ9H195 1237 aa9.43□□□□□ -0.9
SPANXN3-201ENST00000370503 LIN7BQ9HAP6 207 aa9.43□□□□□ -0.9
SPANXN3-201ENST00000370503 LDHBP07195 334 aaKnown RBP9.42□□□□□ -0.9
SPANXN3-201ENST00000370503 BAG6P46379 1132 aa9.42□□□□□ -0.9
SPANXN3-201ENST00000370503 TRIM28Q13263 835 aaKnown RBP9.42□□□□□ -0.9
SPANXN3-201ENST00000370503 PRRT3Q5FWE3 981 aa9.42□□□□□ -0.9
SPANXN3-201ENST00000370503 NPAS4Q8IUM7 802 aa9.42□□□□□ -0.9
SPANXN3-201ENST00000370503 ASAP3Q8TDY4 903 aa9.42□□□□□ -0.9
SPANXN3-201ENST00000370503 FBF1Q8TES7 1133 aa9.42□□□□□ -0.9
SPANXN3-201ENST00000370503 ADAM19Q9H013 955 aa9.42□□□□□ -0.9
SPANXN3-201ENST00000370503 PPME1Q9Y570 386 aa9.42□□□□□ -0.9
SPANXN3-201ENST00000370503 RAC1P63000 192 aa9.41□□□□□ -0.9
SPANXN3-201ENST00000370503 BHLHE41Q9C0J9 482 aaPredicted RBP9.41□□□□□ -0.9
SPANXN3-201ENST00000370503 WWC3Q9ULE0 1092 aa9.41□□□□□ -0.9
SPANXN3-201ENST00000370503 CABP4P57796 275 aa9.4□□□□□ -0.9
SPANXN3-201ENST00000370503 FGD1P98174 961 aa9.4□□□□□ -0.9
SPANXN3-201ENST00000370503 KCNMA1Q12791 1236 aa9.4□□□□□ -0.9
SPANXN3-201ENST00000370503 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.4□□□□□ -0.9
SPANXN3-201ENST00000370503 ADAMTSL4Q6UY14 1074 aa9.4□□□□□ -0.9
SPANXN3-201ENST00000370503 ILDR2Q71H61 639 aa9.4□□□□□ -0.9
SPANXN3-201ENST00000370503 CCNJLQ8IV13 435 aa9.4□□□□□ -0.9
SPANXN3-201ENST00000370503 BSNDQ8WZ55 320 aa9.4□□□□□ -0.9
SPANXN3-201ENST00000370503 SETDB2Q96T68 719 aa9.4□□□□□ -0.9
SPANXN3-201ENST00000370503 SH2B1Q9NRF2 756 aaPredicted RBP9.4□□□□□ -0.9
SPANXN3-201ENST00000370503 PPP4R2Q9NY27 417 aa9.4□□□□□ -0.9
SPANXN3-201ENST00000370503 A0A0A0MRY4 1105 aa9.39□□□□□ -0.91
SPANXN3-201ENST00000370503 COL8A1P27658 744 aa9.39□□□□□ -0.91
SPANXN3-201ENST00000370503 CDC25BP30305 580 aa9.39□□□□□ -0.91
SPANXN3-201ENST00000370503 PI16Q6UXB8 463 aa9.39□□□□□ -0.91
SPANXN3-201ENST00000370503 ALYREFQ86V81 257 aaKnown RBP9.39□□□□□ -0.91
SPANXN3-201ENST00000370503 DTWD1Q8N5C7 304 aa9.39□□□□□ -0.91
SPANXN3-201ENST00000370503 TCF12Q99081 682 aa9.39□□□□□ -0.91
SPANXN3-201ENST00000370503 TRAK1Q9UPV9 953 aa9.39□□□□□ -0.91
SPANXN3-201ENST00000370503 FAM229AH3BQW9 127 aa9.38□□□□□ -0.91
SPANXN3-201ENST00000370503 LINC01387J3KSC0 135 aa9.38□□□□□ -0.91
SPANXN3-201ENST00000370503 SPATA31C1P0DKV0 1188 aa9.38□□□□□ -0.91
SPANXN3-201ENST00000370503 RASSF7Q02833 373 aa9.38□□□□□ -0.91
SPANXN3-201ENST00000370503 FAM117BQ6P1L5 589 aa9.38□□□□□ -0.91
SPANXN3-201ENST00000370503 A0A096LPE4 126 aa9.37□□□□□ -0.91
SPANXN3-201ENST00000370503 A0A1W2PPZ6 126 aa9.37□□□□□ -0.91
SPANXN3-201ENST00000370503 METTL12A8MUP2 240 aa9.37□□□□□ -0.91
SPANXN3-201ENST00000370503 PRPF40AO75400 957 aaKnown RBP9.37□□□□□ -0.91
SPANXN3-201ENST00000370503 EPHA1P21709 976 aa9.37□□□□□ -0.91
SPANXN3-201ENST00000370503 GRM2Q14416 872 aa9.37□□□□□ -0.91
SPANXN3-201ENST00000370503 FMR1NBQ8N0W7 255 aaPredicted RBP9.37□□□□□ -0.91
SPANXN3-201ENST00000370503 SOX13Q9UN79 622 aa9.37□□□□□ -0.91
SPANXN3-201ENST00000370503 H3BRJ5 948 aa9.36□□□□□ -0.91
SPANXN3-201ENST00000370503 GRIA4P48058 902 aa9.36□□□□□ -0.91
SPANXN3-201ENST00000370503 TXNDC11Q6PKC3 985 aa9.36□□□□□ -0.91
SPANXN3-201ENST00000370503 MAP4K3Q8IVH8 894 aa9.36□□□□□ -0.91
SPANXN3-201ENST00000370503 BCO2Q9BYV7 579 aa9.36□□□□□ -0.91
SPANXN3-201ENST00000370503 SRA1Q9HD15 236 aaKnown RBP9.36□□□□□ -0.91
SPANXN3-201ENST00000370503 SPG7Q9UQ90 795 aa9.36□□□□□ -0.91
SPANXN3-201ENST00000370503 ELNP15502 786 aa9.35□□□□□ -0.91
SPANXN3-201ENST00000370503 SPRED3Q2MJR0 410 aa9.35□□□□□ -0.91
SPANXN3-201ENST00000370503 PRPF40BQ6NWY9 871 aaKnown RBP9.35□□□□□ -0.91
SPANXN3-201ENST00000370503 FBXO11Q86XK2 927 aa9.35□□□□□ -0.91
SPANXN3-201ENST00000370503 TMEM238LA0A1B0GVL6 79 aa9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 GIPC1O14908 333 aa9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 DEAF1O75398 565 aaPredicted RBP9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 GDF11O95390 407 aa9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 SETDB1Q15047 1291 aa9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 NXPE4Q6UWF7 544 aa9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 VN1R5Q7Z5H4 357 aa9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 FBXO33Q7Z6M2 555 aa9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 GLIS3Q8NEA6 775 aa9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 DCAF11Q8TEB1 546 aa9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 DCAF5Q96JK2 942 aa9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 FRMD6Q96NE9 622 aa9.34□□□□□ -0.91
SPANXN3-201ENST00000370503 ABCB6Q9NP58 842 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms