RNA–Protein interactions for RNA: ENST00000370137.5

LRRC39-202, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC39, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-202ENST00000370137 GTF3C2Q8WUA4 911 aaPredicted RBP7.98□□□□□ -1.13
LRRC39-202ENST00000370137 NLRP3Q96P20 1036 aa7.98□□□□□ -1.13
LRRC39-202ENST00000370137 DOLKQ9UPQ8 538 aa7.98□□□□□ -1.13
LRRC39-202ENST00000370137 TSPAN6O43657 245 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 RHOQP17081 205 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 CDC27P30260 824 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 TRAPPC10P48553 1259 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 DPYDQ12882 1025 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 NBPF6Q5VWK0 638 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 CC2D1AQ6P1N0 951 aaPredicted RBP7.97□□□□□ -1.13
LRRC39-202ENST00000370137 CHPFQ8IZ52 775 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 PGBD3Q8N328 593 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 ATL2Q8NHH9 583 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 NBPF4Q96M43 638 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 IFT122Q9HBG6 1241 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 AS3MTQ9HBK9 375 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 DNMT3AQ9Y6K1 912 aaPredicted RBP7.97□□□□□ -1.13
LRRC39-202ENST00000370137 DYTNA2CJ06 578 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 IL2RAP01589 272 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 HCLS1P14317 486 aaPredicted RBP7.97□□□□□ -1.13
LRRC39-202ENST00000370137 SCP2P22307 547 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 KRT76Q01546 638 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 EXOSC10Q01780 885 aaKnown RBP7.97□□□□□ -1.13
LRRC39-202ENST00000370137 FKBP4Q02790 459 aaKnown RBP eCLIP7.97□□□□□ -1.13
LRRC39-202ENST00000370137 USP4Q13107 963 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 VWA5B2Q8N398 1253 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 MSL3Q8N5Y2 521 aaKnown RBP7.97□□□□□ -1.13
LRRC39-202ENST00000370137 PPCSQ9HAB8 311 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 RAB6BQ9NRW1 208 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 CXXC1Q9P0U4 656 aaPredicted RBP7.97□□□□□ -1.13
LRRC39-202ENST00000370137 PUF60Q9UHX1 559 aaKnown RBP7.97□□□□□ -1.13
LRRC39-202ENST00000370137 SH3BP1Q9Y3L3 701 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 HRH3Q9Y5N1 445 aa7.97□□□□□ -1.13
LRRC39-202ENST00000370137 BICDL2A1A5D9 508 aa7.96□□□□□ -1.14
LRRC39-202ENST00000370137 SPATA31C2B4DYI2 1134 aa7.96□□□□□ -1.14
LRRC39-202ENST00000370137 TREHO43280 583 aa7.96□□□□□ -1.14
LRRC39-202ENST00000370137 MAPK8P45983 427 aa7.96□□□□□ -1.14
LRRC39-202ENST00000370137 POU4F2Q12837 409 aa7.96□□□□□ -1.14
LRRC39-202ENST00000370137 SETDB1Q15047 1291 aa7.96□□□□□ -1.14
LRRC39-202ENST00000370137 BRDTQ58F21 947 aaPredicted RBP7.96□□□□□ -1.14
LRRC39-202ENST00000370137 ARSHQ5FYA8 562 aa7.96□□□□□ -1.14
LRRC39-202ENST00000370137 SLC27A3Q5K4L6 730 aa7.96□□□□□ -1.14
LRRC39-202ENST00000370137 DDX46Q7L014 1031 aaKnown RBP7.96□□□□□ -1.14
LRRC39-202ENST00000370137 XAGE2Q96GT9 111 aa7.96□□□□□ -1.14
LRRC39-202ENST00000370137 PRIMPOLQ96LW4 560 aa7.96□□□□□ -1.14
LRRC39-202ENST00000370137 ESYT1Q9BSJ8 1104 aa7.96□□□□□ -1.14
LRRC39-202ENST00000370137 NOL7Q9UMY1 257 aaKnown RBP7.96□□□□□ -1.14
LRRC39-202ENST00000370137 CCDC163A0A0D9SF12 145 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 ATF4P18848 351 aaPredicted RBP7.95□□□□□ -1.14
LRRC39-202ENST00000370137 MASP1P48740 699 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 CENPCQ03188 943 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 NFE2Q16621 373 aaPredicted RBP7.95□□□□□ -1.14
LRRC39-202ENST00000370137 TMEM95Q3KNT9 176 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 INO80DQ53TQ3 878 aaPredicted RBP7.95□□□□□ -1.14
LRRC39-202ENST00000370137 SV2AQ7L0J3 742 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 CCDC89Q8N998 374 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 TEX19Q8NA77 164 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 NGDNQ8NEJ9 315 aaKnown RBP7.95□□□□□ -1.14
LRRC39-202ENST00000370137 CNKSR1Q969H4 720 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 YTHDC1Q96MU7 727 aaKnown RBP7.95□□□□□ -1.14
LRRC39-202ENST00000370137 RBCK1Q9BYM8 510 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 LRRC27Q9C0I9 530 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 MUC3BQ9H195 1237 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 KANSL2Q9H9L4 492 aa7.95□□□□□ -1.14
LRRC39-202ENST00000370137 HIP1RO75146 1068 aa7.94□□□□□ -1.14
LRRC39-202ENST00000370137 CDKN1CP49918 316 aaPredicted RBP7.94□□□□□ -1.14
LRRC39-202ENST00000370137 SF3B2Q13435 895 aaKnown RBP7.94□□□□□ -1.14
LRRC39-202ENST00000370137 MAP7D1Q3KQU3 841 aa7.94□□□□□ -1.14
LRRC39-202ENST00000370137 OXLD1Q5BKU9 147 aa7.94□□□□□ -1.14
LRRC39-202ENST00000370137 WDR44Q5JSH3 913 aa7.94□□□□□ -1.14
LRRC39-202ENST00000370137 NBPF10Q6P3W6 841 aaKnown RBP7.94□□□□□ -1.14
LRRC39-202ENST00000370137 NBPF15Q8N660 670 aa7.94□□□□□ -1.14
LRRC39-202ENST00000370137 PLPP7Q8NBV4 271 aa7.94□□□□□ -1.14
LRRC39-202ENST00000370137 MYRIPQ8NFW9 859 aa7.94□□□□□ -1.14
LRRC39-202ENST00000370137 SH3TC2Q8TF17 1288 aa7.94□□□□□ -1.14
LRRC39-202ENST00000370137 APPBP2Q92624 585 aa7.94□□□□□ -1.14
LRRC39-202ENST00000370137 COL25A1Q9BXS0 654 aaPredicted RBP7.94□□□□□ -1.14
LRRC39-202ENST00000370137 ENAMQ9NRM1 1142 aa7.94□□□□□ -1.14
LRRC39-202ENST00000370137 SEPT3Q9UH03 358 aa7.94□□□□□ -1.14
LRRC39-202ENST00000370137 FEZ2Q9UHY8 353 aaPredicted RBP7.94□□□□□ -1.14
LRRC39-202ENST00000370137 MRPS23Q9Y3D9 190 aaKnown RBP7.94□□□□□ -1.14
LRRC39-202ENST00000370137 BICRAQ9NZM4 1560 aa7.93□□□□□ -1.14
LRRC39-202ENST00000370137 CDC14CA4D256 554 aa7.93□□□□□ -1.14
LRRC39-202ENST00000370137 ATF3P18847 181 aa7.93□□□□□ -1.14
LRRC39-202ENST00000370137 SIM2Q14190 667 aaPredicted RBP7.93□□□□□ -1.14
LRRC39-202ENST00000370137 LRRC41Q15345 812 aa7.93□□□□□ -1.14
LRRC39-202ENST00000370137 OCLNQ16625 522 aa7.93□□□□□ -1.14
LRRC39-202ENST00000370137 GRAMD1BQ3KR37 738 aa7.93□□□□□ -1.14
LRRC39-202ENST00000370137 CNTNAP3BQ96NU0 1288 aa7.93□□□□□ -1.14
LRRC39-202ENST00000370137 CNTNAP3Q9BZ76 1288 aa7.93□□□□□ -1.14
LRRC39-202ENST00000370137 FHDC1Q9C0D6 1143 aaPredicted RBP7.93□□□□□ -1.14
LRRC39-202ENST00000370137 SNTG2Q9NY99 539 aa7.93□□□□□ -1.14
LRRC39-202ENST00000370137 SIRPGQ9P1W8 387 aa7.93□□□□□ -1.14
LRRC39-202ENST00000370137 DYRK1BQ9Y463 629 aa7.93□□□□□ -1.14
LRRC39-202ENST00000370137 STAU1O95793 577 aaKnown RBP7.92□□□□□ -1.14
LRRC39-202ENST00000370137 NCOA4Q13772 614 aa7.92□□□□□ -1.14
LRRC39-202ENST00000370137 ESCO1Q5FWF5 840 aa7.92□□□□□ -1.14
LRRC39-202ENST00000370137 RNFT1Q5M7Z0 435 aa7.92□□□□□ -1.14
LRRC39-202ENST00000370137 AXDND1Q5T1B0 1012 aaPredicted RBP7.92□□□□□ -1.14
LRRC39-202ENST00000370137 KSR2Q6VAB6 950 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms