RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 FERMT3Q86UX7 667 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 LPIN2Q92539 896 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 HELLSQ9NRZ9 838 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 SBNO2Q9Y2G9 1366 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 CCDC40Q4G0X9 1142 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 ARHGAP29Q52LW3 1261 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 LRRC45Q96CN5 670 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 PABPC4Q13310 644 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCAF11-202ENST00000369367 DCAF15Q66K64 600 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 KIF24Q5T7B8 1368 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 KIF2AO00139 706 aaPredicted RBP11.29□□□□□ -0.6
SCAF11-202ENST00000369367 DLGAP5Q15398 846 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 CCDC102BQ68D86 513 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 DNAJC10Q8IXB1 793 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 INSRP06213 1382 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 ERLIN1O75477 346 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 FAM89AQ96GI7 184 aa11.29□□□□□ -0.6
SCAF11-202ENST00000369367 GBP2P32456 591 aaPredicted RBP11.28□□□□□ -0.6
SCAF11-202ENST00000369367 KRT27Q7Z3Y8 459 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 IMPG2Q9BZV3 1241 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 EZRP15311 586 aaKnown RBP11.28□□□□□ -0.6
SCAF11-202ENST00000369367 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
SCAF11-202ENST00000369367 PPIP5K2O43314 1243 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 MAGI3Q5TCQ9 1506 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 USO1O60763 962 aaKnown RBP11.28□□□□□ -0.6
SCAF11-202ENST00000369367 CCDC183Q5T5S1 534 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 CARD14Q9BXL6 1004 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 AS3MTQ9HBK9 375 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 GPHNQ9NQX3 736 aaPredicted RBP11.28□□□□□ -0.6
SCAF11-202ENST00000369367 KRT13P13646 458 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 LIG1P18858 919 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 ATP2B4P23634 1241 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 EXOC1Q9NV70 894 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 KCNG4Q8TDN1 519 aa11.28□□□□□ -0.6
SCAF11-202ENST00000369367 PARP1P09874 1014 aaKnown RBP11.27□□□□□ -0.6
SCAF11-202ENST00000369367 MTIF2P46199 727 aaKnown RBP11.27□□□□□ -0.6
SCAF11-202ENST00000369367 TBC1D9Q6ZT07 1266 aa11.27□□□□□ -0.6
SCAF11-202ENST00000369367 CSADQ9Y600 493 aa11.27□□□□□ -0.6
SCAF11-202ENST00000369367 KIF22Q14807 665 aa11.27□□□□□ -0.6
SCAF11-202ENST00000369367 HELBQ8NG08 1087 aaPredicted RBP11.27□□□□□ -0.6
SCAF11-202ENST00000369367 ALG1Q9BT22 464 aa11.27□□□□□ -0.6
SCAF11-202ENST00000369367 RPS8P62241 208 aaKnown RBP11.27□□□□□ -0.61
SCAF11-202ENST00000369367 BICC1Q9H694 974 aaKnown RBP11.27□□□□□ -0.61
SCAF11-202ENST00000369367 RBM8AQ9Y5S9 174 aaKnown RBP11.27□□□□□ -0.61
SCAF11-202ENST00000369367 CHL1O00533 1208 aa11.27□□□□□ -0.61
SCAF11-202ENST00000369367 TFCP2Q12800 502 aa11.27□□□□□ -0.61
SCAF11-202ENST00000369367 OTUD7BQ6GQQ9 843 aa11.27□□□□□ -0.61
SCAF11-202ENST00000369367 BRF1Q92994 677 aa11.27□□□□□ -0.61
SCAF11-202ENST00000369367 ZSCAN12O43309 604 aa11.27□□□□□ -0.61
SCAF11-202ENST00000369367 PPP2R5BQ15173 497 aa11.27□□□□□ -0.61
SCAF11-202ENST00000369367 TCERG1LQ5VWI1 586 aa11.27□□□□□ -0.61
SCAF11-202ENST00000369367 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
SCAF11-202ENST00000369367 PHACTR3Q96KR7 559 aa11.27□□□□□ -0.61
SCAF11-202ENST00000369367 BCS1LQ9Y276 419 aa11.27□□□□□ -0.61
SCAF11-202ENST00000369367 ZCCHC11Q5TAX3 1644 aaKnown RBP11.26□□□□□ -0.61
SCAF11-202ENST00000369367 YEATS4O95619 227 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 HCLS1P14317 486 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-202ENST00000369367 KRT79Q5XKE5 535 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 KLHL10Q6JEL2 608 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 FSIP1Q8NA03 581 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 NOD1Q9Y239 953 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 GUCY1B3Q02153 619 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 CC2D2BQ6DHV5 1058 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 DCTPP1Q9H773 170 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 SAMD9LQ8IVG5 1584 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 PRC1O43663 620 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 PHKG2P15735 406 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 CCDC144CPQ8IYA2 1237 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 ANKARQ7Z5J8 1434 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 FMNL3Q8IVF7 1028 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 CCDC171Q6TFL3 1326 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 ZBED4O75132 1171 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 LZTS2Q9BRK4 669 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 SPC25Q9HBM1 224 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 SFPQP23246 707 aaKnown RBP eCLIP11.26□□□□□ -0.61
SCAF11-202ENST00000369367 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
SCAF11-202ENST00000369367 GJB2P29033 226 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 SPAG1Q07617 926 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 MTERF4Q7Z6M4 381 aaKnown RBP11.25□□□□□ -0.61
SCAF11-202ENST00000369367 SLC4A8Q2Y0W8 1093 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 C2CD5Q86YS7 1000 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 ESYT1Q9BSJ8 1104 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 PLVAPQ9BX97 442 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 ZNF408Q9H9D4 720 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 FAM135BQ49AJ0 1406 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 UNC5CLQ8IV45 518 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 A0A1B0GUL7 405 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 TRIM75PA6NK02 468 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 TCHPQ9BT92 498 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 GOPCQ9HD26 462 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 KCNG1Q9UIX4 513 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 ERVK-7P63135 1459 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 KIAA0232Q92628 1395 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 PHACTR2O75167 634 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 TMEM87BQ96K49 555 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 A1BGP04217 495 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 SDSP20132 328 aa11.25□□□□□ -0.61
SCAF11-202ENST00000369367 STAT6P42226 847 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms