RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 DNAAF4Q8WXU2 420 aa20.49■□□□□ 0.87
CKS1B-202ENST00000368436 ABHD8Q96I13 439 aa20.49■□□□□ 0.87
CKS1B-202ENST00000368436 TSKSQ9UJT2 592 aa20.49■□□□□ 0.87
CKS1B-202ENST00000368436 FAM155AB1AL88 458 aaPredicted RBP20.48■□□□□ 0.87
CKS1B-202ENST00000368436 FKBP5Q13451 457 aaPredicted RBP20.48■□□□□ 0.87
CKS1B-202ENST00000368436 LINS1Q8NG48 757 aa20.48■□□□□ 0.87
CKS1B-202ENST00000368436 ZIC5Q96T25 663 aa20.48■□□□□ 0.87
CKS1B-202ENST00000368436 MYOZ2Q9NPC6 264 aa20.48■□□□□ 0.87
CKS1B-202ENST00000368436 LEMD3Q9Y2U8 911 aa20.48■□□□□ 0.87
CKS1B-202ENST00000368436 ANP32CO43423 234 aa20.47■□□□□ 0.87
CKS1B-202ENST00000368436 ZEB1P37275 1124 aaPredicted RBP20.47■□□□□ 0.87
CKS1B-202ENST00000368436 IGHMBP2P38935 993 aaKnown RBP20.47■□□□□ 0.87
CKS1B-202ENST00000368436 CDCA5Q96FF9 252 aa20.47■□□□□ 0.87
CKS1B-202ENST00000368436 MYH16Q9H6N6 1097 aa20.47■□□□□ 0.87
CKS1B-202ENST00000368436 CASP8AP2Q9UKL3 1982 aa20.46■□□□□ 0.87
CKS1B-202ENST00000368436 ITGA6P23229 1130 aa20.46■□□□□ 0.87
CKS1B-202ENST00000368436 DACT2Q5SW24 774 aa20.46■□□□□ 0.87
CKS1B-202ENST00000368436 ANGEL2Q5VTE6 544 aaKnown RBP20.46■□□□□ 0.87
CKS1B-202ENST00000368436 CCDC102AQ96A19 550 aa20.46■□□□□ 0.87
CKS1B-202ENST00000368436 COA1Q9GZY4 146 aa20.46■□□□□ 0.87
CKS1B-202ENST00000368436 PITPNM2Q9BZ72 1349 aa20.46■□□□□ 0.87
CKS1B-202ENST00000368436 EXOSC9Q06265 439 aaKnown RBP20.45■□□□□ 0.86
CKS1B-202ENST00000368436 FAM161AQ3B820 660 aa20.45■□□□□ 0.86
CKS1B-202ENST00000368436 TXNRD3Q86VQ6 643 aa20.45■□□□□ 0.86
CKS1B-202ENST00000368436 ANKRD2Q9GZV1 360 aa20.45■□□□□ 0.86
CKS1B-202ENST00000368436 SALL2Q9Y467 1007 aaPredicted RBP20.45■□□□□ 0.86
CKS1B-202ENST00000368436 ZNF316A6NFI3 1004 aaPredicted RBP20.44■□□□□ 0.86
CKS1B-202ENST00000368436 STRIP1Q5VSL9 837 aa20.44■□□□□ 0.86
CKS1B-202ENST00000368436 ZNF804BA4D1E1 1349 aa20.44■□□□□ 0.86
CKS1B-202ENST00000368436 AKAP11Q9UKA4 1901 aa20.43■□□□□ 0.86
CKS1B-202ENST00000368436 ZNF157P51786 506 aaPredicted RBP20.43■□□□□ 0.86
CKS1B-202ENST00000368436 MPHOSPH8Q99549 860 aa20.43■□□□□ 0.86
CKS1B-202ENST00000368436 MXD3Q9BW11 206 aa20.43■□□□□ 0.86
CKS1B-202ENST00000368436 SPINK5Q9NQ38 1064 aaPredicted RBP20.43■□□□□ 0.86
CKS1B-202ENST00000368436 MYO3BQ8WXR4 1341 aa20.43■□□□□ 0.86
CKS1B-202ENST00000368436 A0A1B0GUL6 1792 aa20.43■□□□□ 0.86
CKS1B-202ENST00000368436 PAPPA2Q9BXP8 1791 aa20.42■□□□□ 0.86
CKS1B-202ENST00000368436 SLC10A3P09131 477 aa20.42■□□□□ 0.86
CKS1B-202ENST00000368436 KIF23Q02241 960 aaPredicted RBP20.42■□□□□ 0.86
CKS1B-202ENST00000368436 MMP14P50281 582 aa20.41■□□□□ 0.86
CKS1B-202ENST00000368436 FKBP1BP68106 108 aa20.41■□□□□ 0.86
CKS1B-202ENST00000368436 FOXO4P98177 505 aa20.41■□□□□ 0.86
CKS1B-202ENST00000368436 NBPF9Q3BBW0 867 aa20.41■□□□□ 0.86
CKS1B-202ENST00000368436 BEND3Q5T5X7 828 aa20.41■□□□□ 0.86
CKS1B-202ENST00000368436 ANKRD18BA2A2Z9 1011 aa20.4■□□□□ 0.86
CKS1B-202ENST00000368436 KLRK1P26718 216 aa20.4■□□□□ 0.86
CKS1B-202ENST00000368436 OGFOD1Q8N543 542 aa20.4■□□□□ 0.86
CKS1B-202ENST00000368436 SAGE1Q9NXZ1 904 aa20.4■□□□□ 0.86
CKS1B-202ENST00000368436 IRS2Q9Y4H2 1338 aa20.39■□□□□ 0.85
CKS1B-202ENST00000368436 F6X3S4 739 aa20.39■□□□□ 0.85
CKS1B-202ENST00000368436 CHRNDQ07001 517 aa20.39■□□□□ 0.85
CKS1B-202ENST00000368436 TTLL5Q6EMB2 1281 aa20.39■□□□□ 0.85
CKS1B-202ENST00000368436 WNT10BO00744 389 aa20.38■□□□□ 0.85
CKS1B-202ENST00000368436 FBXW7Q969H0 707 aa20.38■□□□□ 0.85
CKS1B-202ENST00000368436 IFIT5Q13325 482 aaKnown RBP20.37■□□□□ 0.85
CKS1B-202ENST00000368436 C15orf52Q6ZUT6 534 aaKnown RBP20.37■□□□□ 0.85
CKS1B-202ENST00000368436 RASAL3Q86YV0 1011 aa20.37■□□□□ 0.85
CKS1B-202ENST00000368436 CSRNP1Q96S65 589 aa20.37■□□□□ 0.85
CKS1B-202ENST00000368436 MCOLN1Q9GZU1 580 aa20.37■□□□□ 0.85
CKS1B-202ENST00000368436 CD209Q9NNX6 404 aa20.37■□□□□ 0.85
CKS1B-202ENST00000368436 SCAF8Q9UPN6 1271 aaKnown RBP20.37■□□□□ 0.85
CKS1B-202ENST00000368436 KCNJ4P48050 445 aa20.36■□□□□ 0.85
CKS1B-202ENST00000368436 GTF2IP78347 998 aa20.36■□□□□ 0.85
CKS1B-202ENST00000368436 REM2Q8IYK8 340 aaPredicted RBP20.36■□□□□ 0.85
CKS1B-202ENST00000368436 RNF186Q9NXI6 227 aa20.36■□□□□ 0.85
CKS1B-202ENST00000368436 CCDC85CA6NKD9 419 aa20.35■□□□□ 0.85
CKS1B-202ENST00000368436 EPHA10Q5JZY3 1008 aa20.35■□□□□ 0.85
CKS1B-202ENST00000368436 MOB2Q70IA6 237 aa20.35■□□□□ 0.85
CKS1B-202ENST00000368436 ZBED3Q96IU2 234 aaPredicted RBP20.35■□□□□ 0.85
CKS1B-202ENST00000368436 SNAP23O00161 211 aa20.34■□□□□ 0.85
CKS1B-202ENST00000368436 GRM8O00222 908 aa20.34■□□□□ 0.85
CKS1B-202ENST00000368436 TAF5LO75529 589 aa20.34■□□□□ 0.85
CKS1B-202ENST00000368436 TRPA1O75762 1119 aa20.34■□□□□ 0.85
CKS1B-202ENST00000368436 SASH1O94885 1247 aa20.34■□□□□ 0.85
CKS1B-202ENST00000368436 PRAMEF18Q5VWM3 479 aa20.34■□□□□ 0.85
CKS1B-202ENST00000368436 LMBR1LQ6UX01 489 aa20.34■□□□□ 0.85
CKS1B-202ENST00000368436 KIAA0825Q8IV33 1275 aa20.34■□□□□ 0.85
CKS1B-202ENST00000368436 FAM9BQ8IZU0 186 aa20.34■□□□□ 0.85
CKS1B-202ENST00000368436 HELBQ8NG08 1087 aaPredicted RBP20.34■□□□□ 0.85
CKS1B-202ENST00000368436 HDAC9Q9UKV0 1011 aa20.34■□□□□ 0.85
CKS1B-202ENST00000368436 ECM29Q5VYK3 1845 aa20.34■□□□□ 0.85
CKS1B-202ENST00000368436 UBE2Q2LH0YL09 131 aa20.33■□□□□ 0.85
CKS1B-202ENST00000368436 RGS19P49795 217 aa20.33■□□□□ 0.85
CKS1B-202ENST00000368436 DGKZQ13574 1117 aa20.33■□□□□ 0.85
CKS1B-202ENST00000368436 CHMP3Q9Y3E7 222 aa20.33■□□□□ 0.85
CKS1B-202ENST00000368436 ALDH1L1O75891 902 aa20.32■□□□□ 0.84
CKS1B-202ENST00000368436 IL1R1P14778 569 aa20.32■□□□□ 0.84
CKS1B-202ENST00000368436 ZNF521Q96K83 1311 aa20.31■□□□□ 0.84
CKS1B-202ENST00000368436 CCDC57Q2TAC2 916 aa20.31■□□□□ 0.84
CKS1B-202ENST00000368436 APOBEC3FQ8IUX4 373 aaKnown RBP20.31■□□□□ 0.84
CKS1B-202ENST00000368436 CERS5Q8N5B7 392 aa20.31■□□□□ 0.84
CKS1B-202ENST00000368436 MTMR14Q8NCE2 650 aa20.31■□□□□ 0.84
CKS1B-202ENST00000368436 ZNF594Q96JF6 807 aaPredicted RBP20.31■□□□□ 0.84
CKS1B-202ENST00000368436 NF2P35240 595 aa20.3■□□□□ 0.84
CKS1B-202ENST00000368436 FKBP1AP62942 108 aaKnown RBP20.3■□□□□ 0.84
CKS1B-202ENST00000368436 LDHAL6AQ6ZMR3 332 aa20.3■□□□□ 0.84
CKS1B-202ENST00000368436 SRCIN1Q9C0H9 1055 aa20.3■□□□□ 0.84
CKS1B-202ENST00000368436 C9orf78Q9NZ63 289 aaPredicted RBP20.3■□□□□ 0.84
CKS1B-202ENST00000368436 ZNF804AQ7Z570 1209 aa20.29■□□□□ 0.84
CKS1B-202ENST00000368436 COL1A1P02452 1464 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms