RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 FAM83GA6ND36 823 aa15.16■□□□□ 0.02
NCSTN-202ENST00000368063 CCAR1Q8IX12 1150 aaKnown RBP15.16■□□□□ 0.02
NCSTN-202ENST00000368063 JMYQ8N9B5 988 aa15.16■□□□□ 0.02
NCSTN-202ENST00000368063 ENGASEQ8NFI3 743 aa15.16■□□□□ 0.02
NCSTN-202ENST00000368063 MIEF2Q96C03 454 aa15.16■□□□□ 0.02
NCSTN-202ENST00000368063 BPIFA3Q9BQP9 254 aa15.16■□□□□ 0.02
NCSTN-202ENST00000368063 UTP14AQ9BVJ6 771 aaKnown RBP15.16■□□□□ 0.02
NCSTN-202ENST00000368063 PPP2R2CQ9Y2T4 447 aa15.16■□□□□ 0.02
NCSTN-202ENST00000368063 KIF3CO14782 793 aa15.15■□□□□ 0.02
NCSTN-202ENST00000368063 GNG11P61952 73 aa15.15■□□□□ 0.02
NCSTN-202ENST00000368063 FAM177A1Q8N128 213 aaPredicted RBP15.15■□□□□ 0.02
NCSTN-202ENST00000368063 CNKSR2Q8WXI2 1034 aa15.15■□□□□ 0.02
NCSTN-202ENST00000368063 ABCB6Q9NP58 842 aa15.15■□□□□ 0.02
NCSTN-202ENST00000368063 NEXMIFQ5QGS0 1516 aa15.15■□□□□ 0.02
NCSTN-202ENST00000368063 MYH15Q9Y2K3 1946 aa15.15■□□□□ 0.02
NCSTN-202ENST00000368063 KIF20BQ96Q89 1820 aa15.15■□□□□ 0.02
NCSTN-202ENST00000368063 GPTP24298 496 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 PTH1RQ03431 593 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 WWC2Q6AWC2 1192 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 PRPF40BQ6NWY9 871 aaKnown RBP15.14■□□□□ 0.01
NCSTN-202ENST00000368063 TMEM139Q8IV31 216 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 PHACTR2O75167 634 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 CASP8Q14790 479 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 GBP6Q6ZN66 633 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 POTEB2H3BUK9 544 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 HSP90B1P14625 803 aaKnown RBP15.14■□□□□ 0.01
NCSTN-202ENST00000368063 CHMP4BP1P59074 171 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 HSP90B2PQ58FF3 399 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 ISM2Q6H9L7 571 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 PRPF38AQ8NAV1 312 aaKnown RBP15.14■□□□□ 0.01
NCSTN-202ENST00000368063 ERCC4Q92889 916 aaPredicted RBP15.14■□□□□ 0.01
NCSTN-202ENST00000368063 CCDC102AQ96A19 550 aa15.14■□□□□ 0.01
NCSTN-202ENST00000368063 RBM28Q9NW13 759 aaKnown RBP15.14■□□□□ 0.01
NCSTN-202ENST00000368063 ERLIN1O75477 346 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 HAP1P54257 671 aaPredicted RBP15.13■□□□□ 0.01
NCSTN-202ENST00000368063 ATP8B2P98198 1209 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 SRGAP1Q7Z6B7 1085 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 DDX54Q8TDD1 881 aaKnown RBP15.13■□□□□ 0.01
NCSTN-202ENST00000368063 FBXW7Q969H0 707 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 MCM8Q9UJA3 840 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 FAM169AQ9Y6X4 670 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 KINO60870 393 aaKnown RBP15.13■□□□□ 0.01
NCSTN-202ENST00000368063 ELF1P32519 619 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 CCT4P50991 539 aaKnown RBP15.13■□□□□ 0.01
NCSTN-202ENST00000368063 SCRN1Q12765 414 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 COL9A3Q14050 684 aaPredicted RBP15.13■□□□□ 0.01
NCSTN-202ENST00000368063 DCTN1Q14203 1278 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 NCAPHQ15003 741 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 DPCR1Q3MIW9 517 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
NCSTN-202ENST00000368063 JPH2Q9BR39 696 aaPredicted RBP15.13■□□□□ 0.01
NCSTN-202ENST00000368063 CUTAO60888 179 aa15.12■□□□□ 0.01
NCSTN-202ENST00000368063 FAM160A1Q05DH4 1040 aa15.12■□□□□ 0.01
NCSTN-202ENST00000368063 DDR1Q08345 913 aa15.12■□□□□ 0.01
NCSTN-202ENST00000368063 FAM69CQ0P6D2 419 aa15.12■□□□□ 0.01
NCSTN-202ENST00000368063 GIMAP7Q8NHV1 300 aa15.12■□□□□ 0.01
NCSTN-202ENST00000368063 CFAP45Q9UL16 551 aa15.12■□□□□ 0.01
NCSTN-202ENST00000368063 GOLGA6L9A6NEM1 432 aa15.12■□□□□ 0.01
NCSTN-202ENST00000368063 SHOX2O60902 331 aaPredicted RBP15.12■□□□□ 0.01
NCSTN-202ENST00000368063 PRPF6O94906 941 aaKnown RBP15.12■□□□□ 0.01
NCSTN-202ENST00000368063 CHGAP10645 457 aaKnown RBP15.12■□□□□ 0.01
NCSTN-202ENST00000368063 ADD1P35611 737 aaKnown RBP15.12■□□□□ 0.01
NCSTN-202ENST00000368063 CCDC73Q6ZRK6 1079 aa15.12■□□□□ 0.01
NCSTN-202ENST00000368063 AFAP1L1Q8TED9 768 aa15.12■□□□□ 0.01
NCSTN-202ENST00000368063 IL1RAPL2Q9NP60 686 aa15.12■□□□□ 0.01
NCSTN-202ENST00000368063 ARHGAP6O43182 974 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 RNF40O75150 1001 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 INHBEP58166 350 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 RCOR1Q9UKL0 485 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 F6X3S4 739 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 RAB11FIP3O75154 756 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 NEDD9Q14511 834 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 POTEDQ86YR6 584 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 CNTROBQ8N137 903 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 ZSWIM4Q9H7M6 989 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 LRRIQ3A6PVS8 624 aaPredicted RBP15.11■□□□□ 0.01
NCSTN-202ENST00000368063 FANCCQ00597 558 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 NECTIN1Q15223 517 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 SLC4A10Q6U841 1118 aa15.11■□□□□ 0.01
NCSTN-202ENST00000368063 GOLGA8FQ08AF8 430 aa15.1■□□□□ 0.01
NCSTN-202ENST00000368063 GOLGA8DPQ0D2H9 430 aa15.1■□□□□ 0.01
NCSTN-202ENST00000368063 BIRC2Q13490 618 aa15.1■□□□□ 0.01
NCSTN-202ENST00000368063 TMEM131LA2VDJ0 1609 aa15.1■□□□□ 0.01
NCSTN-202ENST00000368063 CALRP27797 417 aaKnown RBP15.1■□□□□ 0.01
NCSTN-202ENST00000368063 AARSP49588 968 aaKnown RBP eCLIP15.1■□□□□ 0.01
NCSTN-202ENST00000368063 VSNL1P62760 191 aa15.1■□□□□ 0.01
NCSTN-202ENST00000368063 KLHL33A6NCF5 533 aa15.09■□□□□ 0.01
NCSTN-202ENST00000368063 SYF2O95926 243 aaKnown RBP15.09■□□□□ 0.01
NCSTN-202ENST00000368063 CCT5P48643 541 aa15.09■□□□□ 0.01
NCSTN-202ENST00000368063 XAGE2Q96GT9 111 aa15.09■□□□□ 0.01
NCSTN-202ENST00000368063 HSD3B7Q9H2F3 369 aa15.09■□□□□ 0.01
NCSTN-202ENST00000368063 ABCC6O95255 1503 aa15.09■□□□□ 0.01
NCSTN-202ENST00000368063 WDHD1O75717 1129 aaPredicted RBP15.09■□□□□ 0.01
NCSTN-202ENST00000368063 SLC4A2P04920 1241 aa15.09■□□□□ 0.01
NCSTN-202ENST00000368063 CEBPZQ03701 1054 aaKnown RBP15.09■□□□□ 0.01
NCSTN-202ENST00000368063 BRF1Q92994 677 aa15.09■□□□□ 0.01
NCSTN-202ENST00000368063 CABS1Q96KC9 395 aa15.09■□□□□ 0.01
NCSTN-202ENST00000368063 FTOQ9C0B1 505 aaKnown RBP eCLIP15.09■□□□□ 0.01
NCSTN-202ENST00000368063 NEDD4P46934 1319 aa15.09■□□□□ 0.01
NCSTN-202ENST00000368063 FAM43BQ6ZT52 329 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms