RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 REC8O95072 547 aa11.31□□□□□ -0.6
CNIH4-202ENST00000366857 PKP1Q13835 747 aa11.31□□□□□ -0.6
CNIH4-202ENST00000366857 UTP14AQ9BVJ6 771 aaKnown RBP11.31□□□□□ -0.6
CNIH4-202ENST00000366857 WDR19Q8NEZ3 1342 aa11.31□□□□□ -0.6
CNIH4-202ENST00000366857 MAP4K4O95819 1239 aaPredicted RBP11.31□□□□□ -0.6
CNIH4-202ENST00000366857 SEC62Q99442 399 aaKnown RBP11.31□□□□□ -0.6
CNIH4-202ENST00000366857 PIH1D3Q9NQM4 214 aaKnown RBP11.31□□□□□ -0.6
CNIH4-202ENST00000366857 VPS53Q5VIR6 699 aa11.31□□□□□ -0.6
CNIH4-202ENST00000366857 ADGRA1Q86SQ6 560 aa11.31□□□□□ -0.6
CNIH4-202ENST00000366857 EIF5BO60841 1220 aaKnown RBP11.3□□□□□ -0.6
CNIH4-202ENST00000366857 CYP21A2P08686 494 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 ADD2P35612 726 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 NFKBIBQ15653 356 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 CAMKK2Q96RR4 588 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 SIL1Q9H173 461 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 QTRT2Q9H974 415 aaKnown RBP11.3□□□□□ -0.6
CNIH4-202ENST00000366857 PAG1Q9NWQ8 432 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 SRP68Q9UHB9 627 aaKnown RBP11.3□□□□□ -0.6
CNIH4-202ENST00000366857 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 ROBO3Q96MS0 1386 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 G3BP1Q13283 466 aaKnown RBP eCLIP11.3□□□□□ -0.6
CNIH4-202ENST00000366857 FAM182BQ5T319 152 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 ZBTB47Q9UFB7 747 aaPredicted RBP11.3□□□□□ -0.6
CNIH4-202ENST00000366857 MYH4Q9Y623 1939 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 ALX1Q15699 326 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 CREB3L3Q68CJ9 461 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 RLFQ13129 1914 aa11.3□□□□□ -0.6
CNIH4-202ENST00000366857 MINPP1Q9UNW1 487 aa11.29□□□□□ -0.6
CNIH4-202ENST00000366857 BRD1O95696 1058 aa11.29□□□□□ -0.6
CNIH4-202ENST00000366857 NOVP48745 357 aa11.29□□□□□ -0.6
CNIH4-202ENST00000366857 HMG20BQ9P0W2 317 aa11.29□□□□□ -0.6
CNIH4-202ENST00000366857 IGSF3O75054 1194 aa11.29□□□□□ -0.6
CNIH4-202ENST00000366857 CCDC102BQ68D86 513 aa11.28□□□□□ -0.6
CNIH4-202ENST00000366857 FAM196AQ6ZSG2 479 aa11.28□□□□□ -0.6
CNIH4-202ENST00000366857 LPIN2Q92539 896 aa11.28□□□□□ -0.6
CNIH4-202ENST00000366857 PUS7LQ9H0K6 701 aaKnown RBP11.28□□□□□ -0.6
CNIH4-202ENST00000366857 HSPD1P10809 573 aaKnown RBP11.28□□□□□ -0.6
CNIH4-202ENST00000366857 NFIXQ14938 502 aa11.28□□□□□ -0.6
CNIH4-202ENST00000366857 PI16Q6UXB8 463 aa11.28□□□□□ -0.6
CNIH4-202ENST00000366857 TMEM87AQ8NBN3 555 aa11.28□□□□□ -0.6
CNIH4-202ENST00000366857 TMX3Q96JJ7 454 aa11.28□□□□□ -0.6
CNIH4-202ENST00000366857 RIOK1Q9BRS2 568 aaKnown RBP11.28□□□□□ -0.6
CNIH4-202ENST00000366857 CTDNEP1O95476 244 aa11.28□□□□□ -0.6
CNIH4-202ENST00000366857 PUM3Q15397 648 aaKnown RBP11.28□□□□□ -0.6
CNIH4-202ENST00000366857 ZGPATQ8N5A5 531 aaKnown RBP11.28□□□□□ -0.6
CNIH4-202ENST00000366857 CELF1Q92879 486 aaKnown RBP11.28□□□□□ -0.6
CNIH4-202ENST00000366857 FSD2A1L4K1 749 aa11.27□□□□□ -0.6
CNIH4-202ENST00000366857 HIP1O00291 1037 aa11.27□□□□□ -0.6
CNIH4-202ENST00000366857 ANTXR2P58335 489 aa11.27□□□□□ -0.6
CNIH4-202ENST00000366857 RBM6P78332 1123 aaKnown RBP11.27□□□□□ -0.6
CNIH4-202ENST00000366857 RASGRF1Q13972 1273 aa11.27□□□□□ -0.6
CNIH4-202ENST00000366857 UBE3CQ15386 1083 aa11.27□□□□□ -0.6
CNIH4-202ENST00000366857 SMARCC2Q8TAQ2 1214 aa11.27□□□□□ -0.6
CNIH4-202ENST00000366857 BOLA2Q9H3K6 86 aa11.27□□□□□ -0.6
CNIH4-202ENST00000366857 KLRK1P26718 216 aa11.27□□□□□ -0.61
CNIH4-202ENST00000366857 MCMDC2Q4G0Z9 681 aa11.27□□□□□ -0.61
CNIH4-202ENST00000366857 C7orf43Q8WVR3 580 aa11.27□□□□□ -0.61
CNIH4-202ENST00000366857 EPB41L4AQ9HCS5 686 aaPredicted RBP11.27□□□□□ -0.61
CNIH4-202ENST00000366857 APBB1O00213 710 aa11.27□□□□□ -0.61
CNIH4-202ENST00000366857 PHKA1P46020 1223 aa11.27□□□□□ -0.61
CNIH4-202ENST00000366857 PRR5LQ6MZQ0 368 aa11.27□□□□□ -0.61
CNIH4-202ENST00000366857 POTEAQ6S8J7 498 aa11.27□□□□□ -0.61
CNIH4-202ENST00000366857 KRT27Q7Z3Y8 459 aa11.27□□□□□ -0.61
CNIH4-202ENST00000366857 RBM8AQ9Y5S9 174 aaKnown RBP11.27□□□□□ -0.61
CNIH4-202ENST00000366857 GPTP24298 496 aa11.26□□□□□ -0.61
CNIH4-202ENST00000366857 CHRNDQ07001 517 aa11.26□□□□□ -0.61
CNIH4-202ENST00000366857 MB21D2Q8IYB1 491 aaPredicted RBP11.26□□□□□ -0.61
CNIH4-202ENST00000366857 ANAPC4Q9UJX5 808 aa11.26□□□□□ -0.61
CNIH4-202ENST00000366857 TPCN1Q9ULQ1 816 aa11.26□□□□□ -0.61
CNIH4-202ENST00000366857 RNF113AO15541 343 aaKnown RBP11.26□□□□□ -0.61
CNIH4-202ENST00000366857 HCLS1P14317 486 aaPredicted RBP11.26□□□□□ -0.61
CNIH4-202ENST00000366857 ZAP70P43403 619 aa11.26□□□□□ -0.61
CNIH4-202ENST00000366857 IFIT5Q13325 482 aaKnown RBP11.26□□□□□ -0.61
CNIH4-202ENST00000366857 CWC27Q6UX04 472 aaKnown RBP11.26□□□□□ -0.61
CNIH4-202ENST00000366857 FAM84BQ96KN1 310 aaPredicted RBP11.26□□□□□ -0.61
CNIH4-202ENST00000366857 IFIT2P09913 472 aaKnown RBP11.26□□□□□ -0.61
CNIH4-202ENST00000366857 AK2P54819 239 aa11.26□□□□□ -0.61
CNIH4-202ENST00000366857 CCNL1Q9UK58 526 aaPredicted RBP11.26□□□□□ -0.61
CNIH4-202ENST00000366857 ANKRD18BA2A2Z9 1011 aa11.26□□□□□ -0.61
CNIH4-202ENST00000366857 TRMT112Q9UI30 125 aaKnown RBP11.26□□□□□ -0.61
CNIH4-202ENST00000366857 HPS5Q9UPZ3 1129 aa11.26□□□□□ -0.61
CNIH4-202ENST00000366857 AKAP2Q9Y2D5 859 aa11.26□□□□□ -0.61
CNIH4-202ENST00000366857 RPS6KB1P23443 525 aa11.25□□□□□ -0.61
CNIH4-202ENST00000366857 TNPO1Q92973 898 aaKnown RBP11.25□□□□□ -0.61
CNIH4-202ENST00000366857 RTL5Q5HYW3 569 aaPredicted RBP11.25□□□□□ -0.61
CNIH4-202ENST00000366857 IL1R1P14778 569 aa11.25□□□□□ -0.61
CNIH4-202ENST00000366857 TMED8Q6PL24 325 aaPredicted RBP11.25□□□□□ -0.61
CNIH4-202ENST00000366857 CCDC129Q6ZRS4 1044 aa11.25□□□□□ -0.61
CNIH4-202ENST00000366857 NIP7Q9Y221 180 aaKnown RBP eCLIP11.25□□□□□ -0.61
CNIH4-202ENST00000366857 SNAP23O00161 211 aa11.24□□□□□ -0.61
CNIH4-202ENST00000366857 FRAT2O75474 233 aaPredicted RBP11.24□□□□□ -0.61
CNIH4-202ENST00000366857 ADD1P35611 737 aaKnown RBP11.24□□□□□ -0.61
CNIH4-202ENST00000366857 ME3Q16798 604 aa11.24□□□□□ -0.61
CNIH4-202ENST00000366857 STRBPQ96SI9 672 aaKnown RBP11.24□□□□□ -0.61
CNIH4-202ENST00000366857 A0A0G2JMZ2 1700 aa11.24□□□□□ -0.61
CNIH4-202ENST00000366857 COL2A1P02458 1487 aaPredicted RBP11.24□□□□□ -0.61
CNIH4-202ENST00000366857 UBE4AQ14139 1066 aa11.24□□□□□ -0.61
CNIH4-202ENST00000366857 TXNRD3Q86VQ6 643 aa11.24□□□□□ -0.61
CNIH4-202ENST00000366857 MCM2P49736 904 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms