RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SELENOOQ9BVL4 669 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 CDC42BPBQ9Y5S2 1711 aa13.72□□□□□ -0.21
CDC42BPA-203ENST00000366766 RNF113AO15541 343 aaKnown RBP13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 GNA11P29992 359 aa13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 TRIM14Q14142 442 aa13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 CCDC85AQ96PX6 553 aaPredicted RBP13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 TFIP11Q9UBB9 837 aaKnown RBP13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 LMBR1Q8WVP7 490 aa13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 NAP1L4Q99733 375 aaKnown RBP13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 ELP1O95163 1332 aa13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 TBCAO75347 108 aaKnown RBP13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 MAP2K1Q02750 393 aaPredicted RBP13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 CREB3L3Q68CJ9 461 aa13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 Q6ZUG5 572 aa13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 MPNDQ8N594 471 aa13.71□□□□□ -0.21
CDC42BPA-203ENST00000366766 RASAL2Q9UJF2 1139 aa13.71□□□□□ -0.22
CDC42BPA-203ENST00000366766 NUTM2AQ8IVF1 878 aaPredicted RBP13.71□□□□□ -0.22
CDC42BPA-203ENST00000366766 FAM160A1Q05DH4 1040 aa13.71□□□□□ -0.22
CDC42BPA-203ENST00000366766 IQCDQ96DY2 449 aa13.71□□□□□ -0.22
CDC42BPA-203ENST00000366766 SLU7O95391 586 aaKnown RBP13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 HECW2Q9P2P5 1572 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 MATR3P43243 847 aaKnown RBP eCLIP13.7□□□□□ -0.225e-7■■■□□ 18.6
CDC42BPA-203ENST00000366766 IP6K1Q92551 441 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 WDHD1O75717 1129 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 ZBTB3Q9H5J0 574 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 DACT1Q9NYF0 836 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 GSTTP1A0A1W2PQM5 241 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 AKR1B10O60218 316 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 CARD14Q9BXL6 1004 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 ZNF445P59923 1031 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 GIMAP6Q6P9H5 292 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 DDX21Q9NR30 783 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 ANKRD62A6NC57 917 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 RILPL1Q5EBL4 403 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 STK11IPQ8N1F8 1099 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 JADE2Q9NQC1 790 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 CTAGE15A4D2H0 777 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 ZBTB7BO15156 539 aaPredicted RBP13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 CTAGE8P0CG41 777 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 CTAGE6Q86UF2 777 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 CTAGE4Q8IX94 777 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 GDPD2Q9HCC8 539 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 STK24Q9Y6E0 443 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 CHD1O14646 1710 aa13.7□□□□□ -0.22
CDC42BPA-203ENST00000366766 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 SYT1P21579 422 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 ST5P78524 1137 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 GOLGA1Q92805 767 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 OPA1O60313 960 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 COPS6Q7L5N1 327 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.69□□□□□ -0.221e-35■■■■□ 20
CDC42BPA-203ENST00000366766 SIRT1Q96EB6 747 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 CHL1O00533 1208 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 RLBP1P12271 317 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 C19orf44Q9H6X5 657 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 IMPACTQ9P2X3 320 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 TACC1O75410 805 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 TM6SF1Q9BZW5 370 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 GUCY1B3Q02153 619 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 IQUBQ8NA54 791 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 TMEM87BQ96K49 555 aa13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 CDCA7Q9BWT1 371 aaPredicted RBP13.69□□□□□ -0.22
CDC42BPA-203ENST00000366766 CABP5Q9NP86 173 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 ZNF804AQ7Z570 1209 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 SAMD9LQ8IVG5 1584 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 AK2P54819 239 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 DNM1Q05193 864 aaKnown RBP13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 ANKRD2Q9GZV1 360 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 KRI1Q8N9T8 703 aaKnown RBP13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 ZFYVE16Q7Z3T8 1539 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 LAMC1P11047 1609 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 BIN1O00499 593 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 PAF1Q8N7H5 531 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 NMIQ13287 307 aaPredicted RBP13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 SPECC1Q5M775 1068 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 PRC1O43663 620 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 HSF2BPO75031 334 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 TSPY3P0CV98 308 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 TSPY8P0CW00 308 aa13.68□□□□□ -0.22
CDC42BPA-203ENST00000366766 HLTFQ14527 1009 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■□□□ 13.6
CDC42BPA-203ENST00000366766 TRMT1Q9NXH9 659 aaKnown RBP13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 ARAP3Q8WWN8 1544 aa13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 NBPF6Q5VWK0 638 aa13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 NBPF5PQ86XG9 351 aaPredicted RBP13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 NBPF4Q96M43 638 aa13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 BICDL1Q6ZP65 573 aa13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 NSRP1Q9H0G5 558 aaKnown RBP13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 TRPM1Q7Z4N2 1603 aa13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 KIF5AQ12840 1032 aa13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 CEP128Q6ZU80 1094 aa13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 IL2RBP14784 551 aa13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 KRT2P35908 639 aa13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 SLC9C2Q5TAH2 1124 aa13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 IBTKQ9P2D0 1353 aaPredicted RBP13.67□□□□□ -0.22
CDC42BPA-203ENST00000366766 FSD2A1L4K1 749 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms