RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CCSER2Q9H7U1 834 aa8.82□□□□□ -1
RNU4-39P-201ENST00000362455 DZANK1Q9NVP4 752 aa8.82□□□□□ -1
RNU4-39P-201ENST00000362455 TMEM238LA0A1B0GVL6 79 aa8.81□□□□□ -1
RNU4-39P-201ENST00000362455 BMP4P12644 408 aa8.81□□□□□ -1
RNU4-39P-201ENST00000362455 PTPN12Q05209 780 aaKnown RBP8.81□□□□□ -1
RNU4-39P-201ENST00000362455 ZNF394Q53GI3 561 aa8.81□□□□□ -1
RNU4-39P-201ENST00000362455 ZNF468Q5VIY5 522 aaPredicted RBP8.81□□□□□ -1
RNU4-39P-201ENST00000362455 CCNJLQ8IV13 435 aa8.81□□□□□ -1
RNU4-39P-201ENST00000362455 SPACA7Q96KW9 195 aa8.81□□□□□ -1
RNU4-39P-201ENST00000362455 GGT7Q9UJ14 662 aa8.81□□□□□ -1
RNU4-39P-201ENST00000362455 TTF2Q9UNY4 1162 aaKnown RBP8.81□□□□□ -1
RNU4-39P-201ENST00000362455 KIF21AQ7Z4S6 1674 aa8.81□□□□□ -1
RNU4-39P-201ENST00000362455 WDR62O43379 1518 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 LOC102724428A0A0B4J2F2 783 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 H3BM21 787 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 J3QW42 95 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 SIK1P57059 783 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 TBC1D8BQ0IIM8 1120 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 DTHD1Q6ZMT9 781 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 HFE2Q6ZVN8 426 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 HHIPQ96QV1 700 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 UBE2OQ9C0C9 1292 aaKnown RBP8.8□□□□□ -1
RNU4-39P-201ENST00000362455 ACBD3Q9H3P7 528 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 DNAJB12Q9NXW2 375 aaKnown RBP8.8□□□□□ -1
RNU4-39P-201ENST00000362455 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.8□□□□□ -1
RNU4-39P-201ENST00000362455 PCDHGB7Q9Y5F8 929 aa8.8□□□□□ -1
RNU4-39P-201ENST00000362455 NFKBIEO00221 500 aa8.79□□□□□ -1
RNU4-39P-201ENST00000362455 TERTO14746 1132 aaKnown RBP8.79□□□□□ -1
RNU4-39P-201ENST00000362455 XRCC5P13010 732 aaKnown RBP8.79□□□□□ -1
RNU4-39P-201ENST00000362455 PCBP4P57723 403 aaKnown RBP8.79□□□□□ -1
RNU4-39P-201ENST00000362455 USP48Q86UV5 1035 aa8.79□□□□□ -1
RNU4-39P-201ENST00000362455 DDX41Q9UJV9 622 aaKnown RBP8.79□□□□□ -1
RNU4-39P-201ENST00000362455 AKAP2Q9Y2D5 859 aa8.79□□□□□ -1
RNU4-39P-201ENST00000362455 SIN3BO75182 1162 aa8.78□□□□□ -1
RNU4-39P-201ENST00000362455 GRIA4P48058 902 aa8.78□□□□□ -1
RNU4-39P-201ENST00000362455 ATP11AP98196 1134 aa8.78□□□□□ -1
RNU4-39P-201ENST00000362455 TMEM102Q8N9M5 508 aaPredicted RBP8.78□□□□□ -1
RNU4-39P-201ENST00000362455 SREK1Q8WXA9 508 aaKnown RBP8.78□□□□□ -1
RNU4-39P-201ENST00000362455 BHLHE41Q9C0J9 482 aaPredicted RBP8.78□□□□□ -1
RNU4-39P-201ENST00000362455 RASSF4Q9H2L5 321 aa8.78□□□□□ -1
RNU4-39P-201ENST00000362455 PPM1HQ9ULR3 514 aa8.78□□□□□ -1
RNU4-39P-201ENST00000362455 METTL12A8MUP2 240 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 GHRHP01286 108 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 MX2P20592 715 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 RACK1P63244 317 aaKnown RBP8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 GAS6Q14393 721 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 PCSK7Q16549 785 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 SPRED3Q2MJR0 410 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 ERMP1Q7Z2K6 904 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 ZNF654Q8IZM8 581 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 NXPE3Q969Y0 559 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 TINF2Q9BSI4 451 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 NOC4LQ9BVI4 516 aaKnown RBP8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 PBX4Q9BYU1 374 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 SRA1Q9HD15 236 aaKnown RBP8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 AVENQ9NQS1 362 aaPredicted RBP8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1.01
RNU4-39P-201ENST00000362455 PDE2AO00408 941 aaPredicted RBP8.76□□□□□ -1.01
RNU4-39P-201ENST00000362455 FBXO24O75426 580 aa8.76□□□□□ -1.01
RNU4-39P-201ENST00000362455 EIF2AK2P19525 551 aaKnown RBP8.76□□□□□ -1.01
RNU4-39P-201ENST00000362455 TNNI2P48788 182 aa8.76□□□□□ -1.01
RNU4-39P-201ENST00000362455 CCDC85BQ15834 202 aaPredicted RBP8.76□□□□□ -1.01
RNU4-39P-201ENST00000362455 CAPN10Q9HC96 672 aa8.76□□□□□ -1.01
RNU4-39P-201ENST00000362455 COPRSQ9NQ92 184 aa8.76□□□□□ -1.01
RNU4-39P-201ENST00000362455 KLF15Q9UIH9 416 aa8.76□□□□□ -1.01
RNU4-39P-201ENST00000362455 CFTRP13569 1480 aa8.76□□□□□ -1.01
RNU4-39P-201ENST00000362455 ITPKAP23677 461 aa8.75□□□□□ -1.01
RNU4-39P-201ENST00000362455 MAP3K10Q02779 954 aa8.75□□□□□ -1.01
RNU4-39P-201ENST00000362455 FAM35AQ86V20 835 aa8.75□□□□□ -1.01
RNU4-39P-201ENST00000362455 ASAP3Q8TDY4 903 aa8.75□□□□□ -1.01
RNU4-39P-201ENST00000362455 ANKRD24Q8TF21 1146 aa8.75□□□□□ -1.01
RNU4-39P-201ENST00000362455 TNFRSF25Q93038 417 aa8.75□□□□□ -1.01
RNU4-39P-201ENST00000362455 DRC1Q96MC2 740 aa8.75□□□□□ -1.01
RNU4-39P-201ENST00000362455 RBSNQ9H1K0 784 aa8.75□□□□□ -1.01
RNU4-39P-201ENST00000362455 SLC6A14Q9UN76 642 aa8.75□□□□□ -1.01
RNU4-39P-201ENST00000362455 A0A096LPE4 126 aa8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 A0A1W2PPZ6 126 aa8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 VSIG8P0DPA2 414 aa8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 ARAFP10398 606 aa8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 CPB1P15086 417 aa8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 TPTE2Q6XPS3 522 aa8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 GPR161Q8N6U8 529 aaKnown RBP8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 IRF7Q92985 503 aa8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 POP1Q99575 1024 aaKnown RBP8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 TRIM56Q9BRZ2 755 aaKnown RBP8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 KBTBD4Q9NVX7 518 aa8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 NAGPAQ9UK23 515 aa8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 CEP164Q9UPV0 1460 aa8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 WIZO95785 1651 aa8.74□□□□□ -1.01
RNU4-39P-201ENST00000362455 ADH6P28332 368 aa8.73□□□□□ -1.01
RNU4-39P-201ENST00000362455 ADH7P40394 386 aa8.73□□□□□ -1.01
RNU4-39P-201ENST00000362455 SF3A1Q15459 793 aaKnown RBP8.73□□□□□ -1.01
RNU4-39P-201ENST00000362455 CEP135Q66GS9 1140 aa8.73□□□□□ -1.01
RNU4-39P-201ENST00000362455 ZFYVE1Q9HBF4 777 aa8.73□□□□□ -1.01
RNU4-39P-201ENST00000362455 INPP5FQ9Y2H2 1132 aa8.73□□□□□ -1.01
RNU4-39P-201ENST00000362455 URB2Q14146 1524 aaKnown RBP8.73□□□□□ -1.01
RNU4-39P-201ENST00000362455 RSF1Q96T23 1441 aaPredicted RBP8.72□□□□□ -1.01
RNU4-39P-201ENST00000362455 SMNDC1O75940 238 aaKnown RBP eCLIP8.72□□□□□ -1.01
RNU4-39P-201ENST00000362455 NFX1Q12986 1120 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms