RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RSRP1Q9BUV0 290 aa5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 OXCT2Q9BYC2 517 aaPredicted RBP5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 TTF2Q9UNY4 1162 aaKnown RBP5.91□□□□□ -1.46
RNU6-28P-201ENST00000362378 FAM181BA6NEQ2 426 aa5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 C11orf95C9JLR9 678 aaPredicted RBP5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 C2CD2LO14523 706 aa5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 SIN3BO75182 1162 aa5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 ZNF468Q5VIY5 522 aaPredicted RBP5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 NXPE3Q969Y0 559 aa5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 SPACA7Q96KW9 195 aa5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 GMLQ99445 158 aa5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 CAPN10Q9HC96 672 aa5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 AVENQ9NQS1 362 aaPredicted RBP5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 PRR12Q9ULL5 1215 aa5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 PCDHGB7Q9Y5F8 929 aa5.9□□□□□ -1.46
RNU6-28P-201ENST00000362378 CDC14CA4D256 554 aa5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 GPR25O00155 361 aa5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 GRIA4P48058 902 aa5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 TNNI2P48788 182 aa5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 GNL2Q13823 731 aaKnown RBP5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 DTHD1Q6ZMT9 781 aa5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 SV2BQ7L1I2 683 aa5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 SYT9Q86SS6 491 aa5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 TNFRSF25Q93038 417 aa5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 PBX4Q9BYU1 374 aa5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 COPRSQ9NQ92 184 aa5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 DNAJB12Q9NXW2 375 aaKnown RBP5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 AKAP2Q9Y2D5 859 aa5.89□□□□□ -1.47
RNU6-28P-201ENST00000362378 A0A096LPE4 126 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 A0A1W2PPZ6 126 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 J3QW42 95 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 PDE2AO00408 941 aaPredicted RBP5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 TRPA1O75762 1119 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 RLBP1P12271 317 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 PWP1Q13610 501 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 CCDC85BQ15834 202 aaPredicted RBP5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 RPS26P11Q5JNZ5 115 aaPredicted RBP5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 UBXN4Q92575 508 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 HHIPQ96QV1 700 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 MDFIQ99750 246 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 RASSF4Q9H2L5 321 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 KBTBD4Q9NVX7 518 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 INPP5FQ9Y2H2 1132 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 SHROOM4Q9ULL8 1493 aa5.88□□□□□ -1.47
RNU6-28P-201ENST00000362378 BMP4P12644 408 aa5.87□□□□□ -1.47
RNU6-28P-201ENST00000362378 GJA8P48165 433 aa5.87□□□□□ -1.47
RNU6-28P-201ENST00000362378 MLLT1Q03111 559 aaPredicted RBP5.87□□□□□ -1.47
RNU6-28P-201ENST00000362378 SPRED3Q2MJR0 410 aa5.87□□□□□ -1.47
RNU6-28P-201ENST00000362378 RELL1Q8IUW5 271 aa5.87□□□□□ -1.47
RNU6-28P-201ENST00000362378 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
RNU6-28P-201ENST00000362378 UBE2OQ9C0C9 1292 aaKnown RBP5.87□□□□□ -1.47
RNU6-28P-201ENST00000362378 CEP44Q9C0F1 390 aa5.87□□□□□ -1.47
RNU6-28P-201ENST00000362378 RBSNQ9H1K0 784 aa5.87□□□□□ -1.47
RNU6-28P-201ENST00000362378 ADARB2-AS1A8MUL3 147 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 METTL12A8MUP2 240 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 GHRHP01286 108 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 ARAFP10398 606 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 ATP11AP98196 1134 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 GAS6Q14393 721 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 HFE2Q6ZVN8 426 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 ARMC5Q96C12 935 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 TMEM74Q96NL1 305 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 POP1Q99575 1024 aaKnown RBP5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 TANGO6Q9C0B7 1094 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 ZNF576Q9H609 170 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 KCNQ5Q9NR82 932 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 PRKAG2Q9UGJ0 569 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 KLF15Q9UIH9 416 aa5.86□□□□□ -1.47
RNU6-28P-201ENST00000362378 SMNDC1O75940 238 aaKnown RBP eCLIP5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 MX2P20592 715 aa5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 PCBP4P57723 403 aaKnown RBP5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 ARID5AQ03989 594 aa5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 PAK2Q13177 524 aa5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 TPTE2Q6XPS3 522 aa5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 NPAS3Q8IXF0 933 aa5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 RASGRP4Q8TDF6 673 aa5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 NECAB3Q96P71 396 aaPredicted RBP5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 TRIM56Q9BRZ2 755 aaKnown RBP5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 IGFLR1Q9H665 355 aa5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 SEC31BQ9NQW1 1179 aa5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 ADAMTS1Q9UHI8 967 aa5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 SLC6A14Q9UN76 642 aa5.85□□□□□ -1.47
RNU6-28P-201ENST00000362378 ENC1O14682 589 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 FBXO24O75426 580 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 CELA3AP09093 270 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 EIF2AK2P19525 551 aaKnown RBP5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 ADH6P28332 368 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 MAP2K3P46734 347 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 FAAP100Q0VG06 881 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 PERM1Q5SV97 790 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 FAM35AQ86V20 835 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 VPS37DQ86XT2 251 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 PHC3Q8NDX5 983 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 ASAP3Q8TDY4 903 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 BSNDQ8WZ55 320 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 TTC9Q92623 222 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 PLD4Q96BZ4 506 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 GPRASP2Q96D09 838 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 RHOVQ96L33 236 aa5.84□□□□□ -1.47
RNU6-28P-201ENST00000362378 SPON2Q9BUD6 331 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms