RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ARNTLO00327 626 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 HRGP04196 525 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 MCM4P33991 863 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 SCTRP47872 440 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 LONRF3Q496Y0 759 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 TTC9Q92623 222 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 KRTAP3-3Q9BYR6 98 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 KRTAP3-2Q9BYR7 98 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 PRDM15P57071 1507 aaPredicted RBP2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 RPGRIP1LQ68CZ1 1315 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 PTCD1O75127 700 aaKnown RBP2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 AP1G2O75843 785 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 ACRP10323 421 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 RALBP1Q15311 655 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 LONRF2Q1L5Z9 754 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 FBXL19Q6PCT2 694 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 NUDT18Q6ZVK8 323 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 STRA8Q7Z7C7 330 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 ENOX1Q8TC92 643 aaKnown RBP2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 INO80BQ9C086 356 aaPredicted RBP2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 ZNF646O15015 1829 aaPredicted RBP2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 NRKQ7Z2Y5 1582 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 UGGT1Q9NYU2 1555 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 CLTCQ00610 1675 aaKnown RBP2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 ABCC1P33527 1531 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 LMTK2Q8IWU2 1503 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 TRIM27P14373 513 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 NCLP19338 710 aaKnown RBP2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 PKDCCQ504Y2 493 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 FMNL3Q8IVF7 1028 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 FAM200AQ8TCP9 573 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 BORCS6Q96GS4 357 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 STRBPQ96SI9 672 aaKnown RBP2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 NOC4LQ9BVI4 516 aaKnown RBP2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 SLC13A1Q9BZW2 595 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 SLC12A5Q9H2X9 1139 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 LEMD3Q9Y2U8 911 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 DIP2CQ9Y2E4 1556 aa2.69□□□□□ -1.98
SMARCAD1-202ENST00000359052 CASZ1Q86V15 1759 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 IQGAP1P46940 1657 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 ESYT3A0FGR9 886 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 PRSS47A8MTI9 375 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 SLC6A19Q695T7 634 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 KLHL6Q8WZ60 621 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 UBR1Q8IWV7 1749 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 XRN1Q8IZH2 1706 aaKnown RBP2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 AGLP35573 1532 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 TCOF1Q13428 1488 aaKnown RBP2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 SFI1A8K8P3 1242 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 H3BRB1 525 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 RFX1P22670 979 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 B4GALNT3Q6L9W6 998 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 RNF19BQ6ZMZ0 732 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 ZDHHC16Q969W1 377 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 CEP63Q96MT8 703 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 TUT1Q9H6E5 874 aaKnown RBP2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 PPLO60437 1756 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 KIF1AQ12756 1690 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 PIP5K1CO60331 668 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 RING1Q06587 406 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 DHX8Q14562 1220 aaKnown RBP2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 TRIP4Q15650 581 aaPredicted RBP2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 C1orf159Q96HA4 380 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 ZFYVE28Q9HCC9 887 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 SHANK3Q9BYB0 1731 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 KIAA1210Q9ULL0 1709 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 SIAH2O43255 324 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 GRM5P41594 1212 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 CNTNAP3BQ96NU0 1288 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 CNTNAP3Q9BZ76 1288 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 DNAJC25Q9H1X3 360 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 PTPRHQ9HD43 1115 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 MAP10Q9P2G4 905 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 GPR52Q9Y2T5 361 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 ARHGAP31Q2M1Z3 1444 aa2.68□□□□□ -1.98
SMARCAD1-202ENST00000359052 MECP2P51608 486 aaKnown RBP2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 USP14P54578 494 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 MAP3K9P80192 1104 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 HLTFQ14527 1009 aaKnown RBP eCLIP2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 IFNL3Q8IZI9 196 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 ADAMTS18Q8TE60 1221 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 XAGE2Q96GT9 111 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 CLIC5Q9NZA1 410 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 SALL4Q9UJQ4 1053 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 TET3O43151 1660 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 ACTN4O43707 911 aaKnown RBP2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 NR1I2O75469 434 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 ZNF654Q8IZM8 581 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 RNF34Q969K3 372 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 TRIM39Q9HCM9 518 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 MAP4K5Q9Y4K4 846 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 LMTK3Q96Q04 1460 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 CFAP65Q6ZU64 1925 aaKnown RBP2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 GABRDO14764 452 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 PDGFAP04085 211 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 BCAMP50895 628 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 FUT2Q10981 343 aa2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 EAPPQ56P03 285 aaPredicted RBP2.67□□□□□ -1.98
SMARCAD1-202ENST00000359052 FOXB2Q5VYV0 432 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms