RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 ZNF804AQ7Z570 1209 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 CEP112Q8N8E3 955 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 TRIM47Q96LD4 638 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 SWAP70Q9UH65 585 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 NSFL1CQ9UNZ2 370 aaKnown RBP6.57□□□□□ -1.36
BRCA1-203ENST00000357654 BIVM-ERCC5R4GMW8 1640 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 CCDC196A0A1B0GTZ2 297 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 FOXO3O43524 673 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 NAPAP54920 295 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 PDE3AQ14432 1141 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 CCDC125Q86Z20 511 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 CEP120Q8N960 986 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 TRIM7Q9C029 511 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 KCNK9Q9NPC2 374 aa6.57□□□□□ -1.36
BRCA1-203ENST00000357654 SYNJ2BP-COX16A0A087WUM0 186 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 PSMD2Q13200 908 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 CASC4Q6P4E1 433 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 PRPF38AQ8NAV1 312 aaKnown RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 YIPF2Q9BWQ6 316 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 NUCKS1Q9H1E3 243 aaKnown RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 TRMT1Q9NXH9 659 aaKnown RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 COX16Q9P0S2 106 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 U3KPZ7 1027 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 PALM3A6NDB9 673 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 UBA7P41226 1012 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 IRX3P78415 501 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 FAM160A1Q05DH4 1040 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 TBCCQ15814 346 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 FNBP1Q96RU3 617 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 MTRQ99707 1265 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 PHAXQ9H814 394 aaKnown RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 RFC1P35251 1148 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 CCT4P50991 539 aaKnown RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 PPP2R5AQ15172 486 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 DCAF17Q5H9S7 520 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 APOL6Q9BWW8 343 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 NCAPD3P42695 1498 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 SMARCA5O60264 1052 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 CYP7A1P22680 504 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 PTGS1P23219 599 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 AAMPQ13685 434 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 TTC22Q5TAA0 569 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 MFSD6Q6ZSS7 791 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 ALKBH8Q96BT7 664 aaKnown RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 SEC62Q99442 399 aaKnown RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 RNF41Q9H4P4 317 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 SPECC1L-ADORA2AF8WAN1 911 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 GOLIM4O00461 696 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 ATICP31939 592 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 DPY19L2Q6NUT2 758 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 LDHAL6AQ6ZMR3 332 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 SPAG5Q96R06 1193 aa6.56□□□□□ -1.36
BRCA1-203ENST00000357654 NAA15Q9BXJ9 866 aaKnown RBP6.56□□□□□ -1.36
BRCA1-203ENST00000357654 GNAT3A8MTJ3 354 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 PPP1R7Q15435 360 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 MICALCLQ6ZW33 695 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 FCHSD1Q86WN1 690 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 SBNO2Q9Y2G9 1366 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 CCER2I3L3R5 266 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 MARCKSP29966 332 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-203ENST00000357654 IFIT1BQ5T764 474 aaKnown RBP6.55□□□□□ -1.36
BRCA1-203ENST00000357654 ABI1Q8IZP0 508 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 OCM2P0CE71 109 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 OCMP0CE72 109 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-203ENST00000357654 INPP1P49441 399 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 MAP9Q49MG5 647 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 CPXCR1Q8N123 301 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 LARGE2Q8N3Y3 721 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 HNRNPCL2B2RXH8 293 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 HNRNPCL1O60812 293 aaKnown RBP6.55□□□□□ -1.36
BRCA1-203ENST00000357654 STAT6P42226 847 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 IGBP1P78318 339 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 CKAP4Q07065 602 aaKnown RBP6.55□□□□□ -1.36
BRCA1-203ENST00000357654 LRRC23Q53EV4 343 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-203ENST00000357654 AFAP1Q8N556 730 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 SLITRK6Q9H5Y7 841 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 NFKBIL1Q9UBC1 381 aaPredicted RBP6.55□□□□□ -1.36
BRCA1-203ENST00000357654 NIP7Q9Y221 180 aaKnown RBP eCLIP6.55□□□□□ -1.36
BRCA1-203ENST00000357654 ATP6V0A2Q9Y487 856 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 MCM7P33993 719 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 CCDC152Q4G0S7 254 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 HYPKQ9NX55 129 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 SLC4A4Q9Y6R1 1079 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 NOP14P78316 857 aaKnown RBP6.55□□□□□ -1.36
BRCA1-203ENST00000357654 UBXN4Q92575 508 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 FTOQ9C0B1 505 aaKnown RBP eCLIP6.55□□□□□ -1.36
BRCA1-203ENST00000357654 UBN1Q9NPG3 1134 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 USTQ9Y2C2 406 aa6.55□□□□□ -1.36
BRCA1-203ENST00000357654 ITIH3Q06033 890 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 STRN3Q13033 797 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 SH2D4BQ5SQS7 431 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 IFT74Q96LB3 600 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 GPCPD1Q9NPB8 672 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 RASAL2Q9UJF2 1139 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 DMRT2Q9Y5R5 561 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 SOGA1O94964 1423 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 ZBBXA8MT70 800 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 HGSO14964 777 aaPredicted RBP6.54□□□□□ -1.36
BRCA1-203ENST00000357654 ATP2A1O14983 1001 aa6.54□□□□□ -1.36
BRCA1-203ENST00000357654 STX10O60499 249 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms