RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 KRI1Q8N9T8 703 aaKnown RBP14.4□□□□□ -0.11
SYNCRIP-201ENST00000355238 FERMT1Q9BQL6 677 aa14.4□□□□□ -0.11
SYNCRIP-201ENST00000355238 TOP2BQ02880 1626 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 MEIS3Q99687 375 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 ATP8B2P98198 1209 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 PPP4R3AQ6IN85 833 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 CLSTN2Q9H4D0 955 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 MMRN2Q9H8L6 949 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 DISP3Q9P2K9 1392 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 KIF3CO14782 793 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 MCMDC2Q4G0Z9 681 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 MRPL50Q8N5N7 158 aaKnown RBP14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 CUL5Q93034 780 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 KRT23Q9C075 422 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 SERPINA10Q9UK55 444 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 TTC41PQ6P2S7 1318 aa14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 MPHOSPH10O00566 681 aaKnown RBP14.39□□□□□ -0.11
SYNCRIP-201ENST00000355238 TSNAXIP1Q2TAA8 658 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 RUFY3Q7L099 469 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 ELP1O95163 1332 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 ANKRD36BQ8N2N9 1353 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 STARD3NLO95772 234 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 PPFIA1Q13136 1202 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 EHMT1Q9H9B1 1298 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 PPFIA3O75145 1194 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 WTAPQ15007 396 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 PLEKHM2Q8IWE5 1019 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 CCDC26Q8TAB7 109 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 TCEANC2Q96MN5 208 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 CCDC110Q8TBZ0 833 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 MIPOL1Q8TD10 442 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 DHX58Q96C10 678 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 CNNM2Q9H8M5 875 aa14.38□□□□□ -0.11
SYNCRIP-201ENST00000355238 ASXL1Q8IXJ9 1541 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 TLDC2A0PJX2 215 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 ATP6V1AP38606 617 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 ZSCAN29Q8IWY8 852 aaPredicted RBP14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 KCNH5Q8NCM2 988 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 UBLCP1Q8WVY7 318 aaPredicted RBP14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 SEC62Q99442 399 aaKnown RBP14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 ZBTB40Q9NUA8 1239 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 MAP3K2Q9Y2U5 619 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 TRIM75PA6NK02 468 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 GRIN2BQ13224 1484 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 CROCCP2Q86T23 111 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 GPR161Q8N6U8 529 aaKnown RBP14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 NEK11Q8NG66 645 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 FERMT2Q96AC1 680 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 CBX8Q9HC52 389 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 LMBRD1Q9NUN5 540 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 ANAPC4Q9UJX5 808 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 TTC21BQ7Z4L5 1316 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 KDM2BQ8NHM5 1336 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 GOLGA6BA6NDN3 693 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 ARHGAP6O43182 974 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 RAB11FIP4Q86YS3 637 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 VCXQ9H320 206 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 NKIRAS1Q9NYS0 192 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 BRD3Q15059 726 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 C17orf53Q8N3J3 647 aaPredicted RBP14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 VIMP08670 466 aaKnown RBP14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 RTN1Q16799 776 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 RUFY4Q6ZNE9 571 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 JAKMIP2Q96AA8 810 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 KCNK9Q9NPC2 374 aa14.37□□□□□ -0.11
SYNCRIP-201ENST00000355238 RAD50Q92878 1312 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 LRRC2Q9BYS8 371 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 EMILIN1Q9Y6C2 1016 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 CIB2O75838 187 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 KAT14Q9H8E8 782 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 TBCAO75347 108 aaKnown RBP14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 C8orf74Q6P047 294 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 C16orf71Q8IYS4 520 aaPredicted RBP14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 SYCP3Q8IZU3 236 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 CYP26C1Q6V0L0 522 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 IFT20Q8IY31 132 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 CREB3L3Q68CJ9 461 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 TOM1L2Q6ZVM7 507 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 SPATS2Q86XZ4 545 aaKnown RBP14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 CABS1Q96KC9 395 aa14.36□□□□□ -0.11
SYNCRIP-201ENST00000355238 ASIC1P78348 528 aa14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 PDE4BQ07343 736 aa14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 PCF11O94913 1555 aaKnown RBP14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 PTPDC1A2A3K4 754 aa14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 CHMLP26374 656 aa14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 HPDP32754 393 aaPredicted RBP14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 DZIP1Q86YF9 867 aaKnown RBP14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 LRRC45Q96CN5 670 aa14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 ABCC5O15440 1437 aa14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 EPRSP07814 1512 aaKnown RBP14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 CALCOCO2Q13137 446 aa14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 SMIM23A6NLE4 172 aa14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 RBM5P52756 815 aaKnown RBP eCLIP14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 IGSF22Q8N9C0 903 aa14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 KIAA1524Q8TCG1 905 aa14.35□□□□□ -0.11
SYNCRIP-201ENST00000355238 FANCCQ00597 558 aa14.34□□□□□ -0.11
SYNCRIP-201ENST00000355238 SF3B2Q13435 895 aaKnown RBP14.34□□□□□ -0.11
SYNCRIP-201ENST00000355238 PI4KAP2A4QPH2 592 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms