RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 CRY2Q49AN0 593 aa24.8■■□□□ 1.56
TRIM4-202ENST00000354241 PI16Q6UXB8 463 aa24.8■■□□□ 1.56
TRIM4-202ENST00000354241 RBM17Q96I25 401 aaKnown RBP24.79■■□□□ 1.56
TRIM4-202ENST00000354241 LSG1Q9H089 658 aaKnown RBP24.79■■□□□ 1.56
TRIM4-202ENST00000354241 EPB41L2O43491 1005 aaKnown RBP24.78■■□□□ 1.56
TRIM4-202ENST00000354241 UBE4AQ14139 1066 aa24.78■■□□□ 1.56
TRIM4-202ENST00000354241 ANKRD2Q9GZV1 360 aa24.78■■□□□ 1.56
TRIM4-202ENST00000354241 CHGBP05060 677 aa24.78■■□□□ 1.56
TRIM4-202ENST00000354241 KCNJ4P48050 445 aa24.77■■□□□ 1.56
TRIM4-202ENST00000354241 MYH7P12883 1935 aa24.77■■□□□ 1.56
TRIM4-202ENST00000354241 BCAMP50895 628 aa24.76■■□□□ 1.55
TRIM4-202ENST00000354241 WTIPA6NIX2 430 aaPredicted RBP24.76■■□□□ 1.55
TRIM4-202ENST00000354241 ILDR1Q86SU0 546 aaPredicted RBP24.76■■□□□ 1.55
TRIM4-202ENST00000354241 MED23Q9ULK4 1368 aa24.76■■□□□ 1.55
TRIM4-202ENST00000354241 BRIP1Q9BX63 1249 aa24.75■■□□□ 1.55
TRIM4-202ENST00000354241 PTH1RQ03431 593 aa24.74■■□□□ 1.55
TRIM4-202ENST00000354241 TICAM2Q86XR7 235 aa24.74■■□□□ 1.55
TRIM4-202ENST00000354241 TBC1D2Q9BYX2 928 aa24.74■■□□□ 1.55
TRIM4-202ENST00000354241 HMG20BQ9P0W2 317 aa24.74■■□□□ 1.55
TRIM4-202ENST00000354241 CCDC171Q6TFL3 1326 aa24.74■■□□□ 1.55
TRIM4-202ENST00000354241 MYO5AQ9Y4I1 1855 aaKnown RBP24.74■■□□□ 1.55
TRIM4-202ENST00000354241 KLRG2A4D1S0 409 aaPredicted RBP24.74■■□□□ 1.55
TRIM4-202ENST00000354241 RNF113AO15541 343 aaKnown RBP24.74■■□□□ 1.55
TRIM4-202ENST00000354241 LRRFIP1Q32MZ4 808 aaKnown RBP24.74■■□□□ 1.55
TRIM4-202ENST00000354241 ZNF589Q86UQ0 364 aaPredicted RBP24.74■■□□□ 1.55
TRIM4-202ENST00000354241 CYP2E1P05181 493 aaPredicted RBP24.73■■□□□ 1.55
TRIM4-202ENST00000354241 GYG1P46976 350 aa24.73■■□□□ 1.55
TRIM4-202ENST00000354241 RASGRF1Q13972 1273 aa24.73■■□□□ 1.55
TRIM4-202ENST00000354241 RABEP1Q15276 862 aa24.73■■□□□ 1.55
TRIM4-202ENST00000354241 TTF1Q15361 905 aaPredicted RBP24.73■■□□□ 1.55
TRIM4-202ENST00000354241 SLFNL1Q499Z3 407 aa24.73■■□□□ 1.55
TRIM4-202ENST00000354241 MCMDC2Q4G0Z9 681 aa24.73■■□□□ 1.55
TRIM4-202ENST00000354241 SPATA5Q8NB90 893 aa24.73■■□□□ 1.55
TRIM4-202ENST00000354241 SEC62Q99442 399 aaKnown RBP24.73■■□□□ 1.55
TRIM4-202ENST00000354241 PALD1Q9ULE6 856 aa24.73■■□□□ 1.55
TRIM4-202ENST00000354241 HSPA4P34932 840 aa24.73■■□□□ 1.55
TRIM4-202ENST00000354241 CAVIN4Q5BKX8 364 aa24.73■■□□□ 1.55
TRIM4-202ENST00000354241 HOXA10P31260 410 aaPredicted RBP24.72■■□□□ 1.55
TRIM4-202ENST00000354241 SLC51AQ86UW1 340 aa24.72■■□□□ 1.55
TRIM4-202ENST00000354241 HELLSQ9NRZ9 838 aa24.72■■□□□ 1.55
TRIM4-202ENST00000354241 ANKIB1Q9P2G1 1089 aa24.72■■□□□ 1.55
TRIM4-202ENST00000354241 ZMYM1Q5SVZ6 1142 aa24.71■■□□□ 1.55
TRIM4-202ENST00000354241 CCDC129Q6ZRS4 1044 aa24.71■■□□□ 1.55
TRIM4-202ENST00000354241 HSCBQ8IWL3 235 aa24.71■■□□□ 1.55
TRIM4-202ENST00000354241 CRAMP1Q96RY5 1269 aa24.71■■□□□ 1.55
TRIM4-202ENST00000354241 PIH1D3Q9NQM4 214 aaKnown RBP24.71■■□□□ 1.55
TRIM4-202ENST00000354241 ZNF804BA4D1E1 1349 aa24.71■■□□□ 1.55
TRIM4-202ENST00000354241 ANAPC15P60006 121 aa24.71■■□□□ 1.55
TRIM4-202ENST00000354241 VPS37DQ86XT2 251 aa24.71■■□□□ 1.55
TRIM4-202ENST00000354241 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.71■■□□□ 1.55
TRIM4-202ENST00000354241 GNL3LQ9NVN8 582 aaKnown RBP24.71■■□□□ 1.55
TRIM4-202ENST00000354241 ZFYP08048 801 aaPredicted RBP24.7■■□□□ 1.54
TRIM4-202ENST00000354241 KLRK1P26718 216 aa24.7■■□□□ 1.54
TRIM4-202ENST00000354241 PDE6BP35913 854 aa24.7■■□□□ 1.54
TRIM4-202ENST00000354241 CCDC125Q86Z20 511 aa24.7■■□□□ 1.54
TRIM4-202ENST00000354241 IQSEC3Q9UPP2 1182 aaPredicted RBP24.7■■□□□ 1.54
TRIM4-202ENST00000354241 COL11A2P13942 1736 aaPredicted RBP24.69■■□□□ 1.54
TRIM4-202ENST00000354241 BBOX1O75936 387 aa24.69■■□□□ 1.54
TRIM4-202ENST00000354241 SNX21Q969T3 373 aa24.69■■□□□ 1.54
TRIM4-202ENST00000354241 DOCK2Q92608 1830 aa24.69■■□□□ 1.54
TRIM4-202ENST00000354241 ERICH6Q7L0X2 663 aa24.69■■□□□ 1.54
TRIM4-202ENST00000354241 FAM84BQ96KN1 310 aaPredicted RBP24.69■■□□□ 1.54
TRIM4-202ENST00000354241 XDHP47989 1333 aa24.68■■□□□ 1.54
TRIM4-202ENST00000354241 MYH13Q9UKX3 1938 aa24.68■■□□□ 1.54
TRIM4-202ENST00000354241 IDH1O75874 414 aaKnown RBP24.68■■□□□ 1.54
TRIM4-202ENST00000354241 WASHC4Q2M389 1173 aa24.68■■□□□ 1.54
TRIM4-202ENST00000354241 ZSCAN25Q6NSZ9 544 aa24.68■■□□□ 1.54
TRIM4-202ENST00000354241 MAP4K1Q92918 833 aa24.68■■□□□ 1.54
TRIM4-202ENST00000354241 RBM8AQ9Y5S9 174 aaKnown RBP24.68■■□□□ 1.54
TRIM4-202ENST00000354241 PDGFDQ9GZP0 370 aaPredicted RBP24.67■■□□□ 1.54
TRIM4-202ENST00000354241 LEMD3Q9Y2U8 911 aa24.67■■□□□ 1.54
TRIM4-202ENST00000354241 SRGNP10124 158 aa24.67■■□□□ 1.54
TRIM4-202ENST00000354241 NPR1P16066 1061 aa24.67■■□□□ 1.54
TRIM4-202ENST00000354241 PRPF40BQ6NWY9 871 aaKnown RBP24.67■■□□□ 1.54
TRIM4-202ENST00000354241 MAST3O60307 1309 aa24.67■■□□□ 1.54
TRIM4-202ENST00000354241 GPSM2P81274 684 aa24.66■■□□□ 1.54
TRIM4-202ENST00000354241 FBXO33Q7Z6M2 555 aa24.66■■□□□ 1.54
TRIM4-202ENST00000354241 SNX14Q9Y5W7 946 aa24.66■■□□□ 1.54
TRIM4-202ENST00000354241 M0R2C6 588 aa24.65■■□□□ 1.54
TRIM4-202ENST00000354241 PPEF1O14829 653 aaPredicted RBP24.65■■□□□ 1.54
TRIM4-202ENST00000354241 CD2BP2O95400 341 aaKnown RBP24.65■■□□□ 1.54
TRIM4-202ENST00000354241 ADD2P35612 726 aa24.65■■□□□ 1.54
TRIM4-202ENST00000354241 SLC9C2Q5TAH2 1124 aa24.65■■□□□ 1.54
TRIM4-202ENST00000354241 APPBP2Q92624 585 aa24.65■■□□□ 1.54
TRIM4-202ENST00000354241 OSBP2Q969R2 916 aa24.65■■□□□ 1.54
TRIM4-202ENST00000354241 NSFL1CQ9UNZ2 370 aaKnown RBP24.65■■□□□ 1.54
TRIM4-202ENST00000354241 HIBADHP31937 336 aaKnown RBP24.65■■□□□ 1.54
TRIM4-202ENST00000354241 CACNA1SQ13698 1873 aa24.65■■□□□ 1.54
TRIM4-202ENST00000354241 LRRC37AA6NMS7 1700 aa24.64■■□□□ 1.54
TRIM4-202ENST00000354241 NECTIN1Q15223 517 aa24.64■■□□□ 1.53
TRIM4-202ENST00000354241 RASEFQ8IZ41 740 aa24.64■■□□□ 1.53
TRIM4-202ENST00000354241 IL17RAQ96F46 866 aa24.64■■□□□ 1.53
TRIM4-202ENST00000354241 ST18O60284 1047 aa24.63■■□□□ 1.53
TRIM4-202ENST00000354241 FRAT2O75474 233 aaPredicted RBP24.63■■□□□ 1.53
TRIM4-202ENST00000354241 TMC4Q7Z404 712 aa24.63■■□□□ 1.53
TRIM4-202ENST00000354241 TXNRD3Q86VQ6 643 aa24.63■■□□□ 1.53
TRIM4-202ENST00000354241 MASTLQ96GX5 879 aa24.63■■□□□ 1.53
TRIM4-202ENST00000354241 WWC3Q9ULE0 1092 aa24.63■■□□□ 1.53
TRIM4-202ENST00000354241 DENND2AQ9ULE3 1009 aa24.63■■□□□ 1.53
TRIM4-202ENST00000354241 COL1A1P02452 1464 aaPredicted RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms