RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 ALX1Q15699 326 aa12.84□□□□□ -0.35
EPB41-203ENST00000349460 NIP7Q9Y221 180 aaKnown RBP eCLIP12.84□□□□□ -0.35
EPB41-203ENST00000349460 ZNF804BA4D1E1 1349 aa12.84□□□□□ -0.35
EPB41-203ENST00000349460 DEKP35659 375 aaKnown RBP12.84□□□□□ -0.35
EPB41-203ENST00000349460 EVCP57679 992 aa12.84□□□□□ -0.35
EPB41-203ENST00000349460 BLOC1S2Q6QNY1 142 aa12.84□□□□□ -0.35
EPB41-203ENST00000349460 TMEM87AQ8NBN3 555 aa12.84□□□□□ -0.35
EPB41-203ENST00000349460 JAKMIP1Q96N16 626 aaKnown RBP12.84□□□□□ -0.35
EPB41-203ENST00000349460 AFF2P51816 1311 aa12.84□□□□□ -0.35
EPB41-203ENST00000349460 GOLIM4O00461 696 aa12.83□□□□□ -0.35
EPB41-203ENST00000349460 SEMA3EO15041 775 aa12.83□□□□□ -0.35
EPB41-203ENST00000349460 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.35
EPB41-203ENST00000349460 BSDC1Q9NW68 430 aaPredicted RBP12.83□□□□□ -0.35
EPB41-203ENST00000349460 UBE4AQ14139 1066 aa12.83□□□□□ -0.36
EPB41-203ENST00000349460 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
EPB41-203ENST00000349460 LLPHQ9BRT6 129 aaKnown RBP12.83□□□□□ -0.36
EPB41-203ENST00000349460 ZDHHC9Q9Y397 364 aa12.83□□□□□ -0.36
EPB41-203ENST00000349460 MAST3O60307 1309 aa12.83□□□□□ -0.36
EPB41-203ENST00000349460 TRAK2O60296 914 aa12.83□□□□□ -0.36
EPB41-203ENST00000349460 NT5C2P49902 561 aa12.83□□□□□ -0.36
EPB41-203ENST00000349460 KLHL40Q2TBA0 621 aa12.83□□□□□ -0.36
EPB41-203ENST00000349460 GORABQ5T7V8 394 aa12.83□□□□□ -0.36
EPB41-203ENST00000349460 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
EPB41-203ENST00000349460 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
EPB41-203ENST00000349460 SOCS7O14512 581 aa12.82□□□□□ -0.36
EPB41-203ENST00000349460 ADD2P35612 726 aa12.82□□□□□ -0.36
EPB41-203ENST00000349460 MTA3Q9BTC8 594 aa12.82□□□□□ -0.36
EPB41-203ENST00000349460 BRWD3Q6RI45 1802 aa12.82□□□□□ -0.36
EPB41-203ENST00000349460 NRXN2Q9P2S2 1712 aa12.82□□□□□ -0.36
EPB41-203ENST00000349460 KCNJ4P48050 445 aa12.82□□□□□ -0.36
EPB41-203ENST00000349460 DDX46Q7L014 1031 aaKnown RBP12.82□□□□□ -0.36
EPB41-203ENST00000349460 NEK1Q96PY6 1258 aa12.82□□□□□ -0.36
EPB41-203ENST00000349460 ATP6V1DQ9Y5K8 247 aa12.82□□□□□ -0.36
EPB41-203ENST00000349460 LRRC37AA6NMS7 1700 aa12.81□□□□□ -0.36
EPB41-203ENST00000349460 HSPD1P10809 573 aaKnown RBP12.81□□□□□ -0.36
EPB41-203ENST00000349460 PDCP20941 246 aa12.81□□□□□ -0.36
EPB41-203ENST00000349460 ADORA1P30542 326 aa12.81□□□□□ -0.36
EPB41-203ENST00000349460 EXOSC10Q01780 885 aaKnown RBP12.81□□□□□ -0.36
EPB41-203ENST00000349460 ADCK5Q3MIX3 580 aa12.81□□□□□ -0.36
EPB41-203ENST00000349460 ZGPATQ8N5A5 531 aaKnown RBP12.81□□□□□ -0.36
EPB41-203ENST00000349460 UPF3BQ9BZI7 483 aaKnown RBP12.81□□□□□ -0.36
EPB41-203ENST00000349460 RTCBQ9Y3I0 505 aaKnown RBP12.81□□□□□ -0.36
EPB41-203ENST00000349460 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 MCAMP43121 646 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 CCDC102BQ68D86 513 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 FAM196AQ6ZSG2 479 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 SPRYD3Q8NCJ5 442 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 MPHOSPH8Q99549 860 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 BCL11AQ9H165 835 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 QSER1Q2KHR3 1735 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 HSPA1LP34931 641 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 L1TD1Q5T7N2 865 aaKnown RBP12.8□□□□□ -0.36
EPB41-203ENST00000349460 SYNE4Q8N205 404 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 CCNL1Q9UK58 526 aaPredicted RBP12.8□□□□□ -0.36
EPB41-203ENST00000349460 PNPLA7Q6ZV29 1317 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 TCRBV5S4A2TA0A5A2 114 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 CYP21A2P08686 494 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 C15orf52Q6ZUT6 534 aaKnown RBP12.8□□□□□ -0.36
EPB41-203ENST00000349460 DHX32Q7L7V1 743 aaKnown RBP12.8□□□□□ -0.36
EPB41-203ENST00000349460 EDC3Q96F86 508 aaKnown RBP12.8□□□□□ -0.36
EPB41-203ENST00000349460 ANKRD2Q9GZV1 360 aa12.8□□□□□ -0.36
EPB41-203ENST00000349460 GNAT2P19087 354 aa12.79□□□□□ -0.36
EPB41-203ENST00000349460 MEX3CQ5U5Q3 659 aaKnown RBP12.79□□□□□ -0.36
EPB41-203ENST00000349460 MBD3O95983 291 aa12.79□□□□□ -0.36
EPB41-203ENST00000349460 TOB2Q14106 344 aaPredicted RBP12.79□□□□□ -0.36
EPB41-203ENST00000349460 ZAP70P43403 619 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 SEPT12Q8IYM1 358 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 OSBP2Q969R2 916 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 ZNF274Q96GC6 653 aaPredicted RBP12.78□□□□□ -0.36
EPB41-203ENST00000349460 LMBRD1Q9NUN5 540 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 MYH13Q9UKX3 1938 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 ZPR1O75312 459 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 TPTE2Q6XPS3 522 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 ANKRD18AQ8IVF6 992 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 SETDB2Q96T68 719 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 CHD4Q14839 1912 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 TNRC6CQ9HCJ0 1690 aaKnown RBP12.78□□□□□ -0.36
EPB41-203ENST00000349460 SPATA5Q8NB90 893 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 GNL3LQ9NVN8 582 aaKnown RBP12.78□□□□□ -0.36
EPB41-203ENST00000349460 SMC3Q9UQE7 1217 aa12.78□□□□□ -0.36
EPB41-203ENST00000349460 NID2Q14112 1375 aa12.77□□□□□ -0.36
EPB41-203ENST00000349460 M0R2C6 588 aa12.77□□□□□ -0.36
EPB41-203ENST00000349460 PFKFB2O60825 505 aa12.77□□□□□ -0.36
EPB41-203ENST00000349460 ZSCAN22P10073 491 aaPredicted RBP12.77□□□□□ -0.36
EPB41-203ENST00000349460 CSPP1Q1MSJ5 1256 aa12.77□□□□□ -0.36
EPB41-203ENST00000349460 MYO5AQ9Y4I1 1855 aaKnown RBP12.77□□□□□ -0.37
EPB41-203ENST00000349460 HCLS1P14317 486 aaPredicted RBP12.77□□□□□ -0.37
EPB41-203ENST00000349460 SCARF1Q14162 830 aa12.77□□□□□ -0.37
EPB41-203ENST00000349460 ME3Q16798 604 aa12.77□□□□□ -0.37
EPB41-203ENST00000349460 IMMTQ16891 758 aaKnown RBP12.77□□□□□ -0.37
EPB41-203ENST00000349460 GTF3C6Q969F1 213 aa12.77□□□□□ -0.37
EPB41-203ENST00000349460 TPCN1Q9ULQ1 816 aa12.77□□□□□ -0.37
EPB41-203ENST00000349460 CACNA1SQ13698 1873 aa12.76□□□□□ -0.37
EPB41-203ENST00000349460 FOXP2O15409 715 aa12.76□□□□□ -0.37
EPB41-203ENST00000349460 CHRNDQ07001 517 aa12.76□□□□□ -0.37
EPB41-203ENST00000349460 MAP3K12Q12852 859 aa12.76□□□□□ -0.37
EPB41-203ENST00000349460 ERFEQ4G0M1 354 aa12.76□□□□□ -0.37
EPB41-203ENST00000349460 TBC1D9BQ66K14 1250 aa12.76□□□□□ -0.37
EPB41-203ENST00000349460 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
EPB41-203ENST00000349460 ARXQ96QS3 562 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms