RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ANKRD18BA2A2Z9 1011 aa21.63■■□□□ 1.05
BRCC3-202ENST00000340647 TAF5LO75529 589 aa21.63■■□□□ 1.05
BRCC3-202ENST00000340647 CTCFP49711 727 aaPredicted RBP21.62■■□□□ 1.05
BRCC3-202ENST00000340647 DEFB115Q30KQ5 88 aa21.62■■□□□ 1.05
BRCC3-202ENST00000340647 DACT2Q5SW24 774 aa21.62■■□□□ 1.05
BRCC3-202ENST00000340647 RBM26Q5T8P6 1007 aaKnown RBP21.62■■□□□ 1.05
BRCC3-202ENST00000340647 HELBQ8NG08 1087 aaPredicted RBP21.62■■□□□ 1.05
BRCC3-202ENST00000340647 MPHOSPH8Q99549 860 aa21.62■■□□□ 1.05
BRCC3-202ENST00000340647 PTPRCP08575 1304 aa21.61■■□□□ 1.05
BRCC3-202ENST00000340647 USP17L3A6NCW0 530 aa21.61■■□□□ 1.05
BRCC3-202ENST00000340647 USP17L4A6NCW7 530 aa21.61■■□□□ 1.05
BRCC3-202ENST00000340647 IFIT5Q13325 482 aaKnown RBP21.61■■□□□ 1.05
BRCC3-202ENST00000340647 USP17L1Q7RTZ2 530 aa21.61■■□□□ 1.05
BRCC3-202ENST00000340647 USP48Q86UV5 1035 aa21.61■■□□□ 1.05
BRCC3-202ENST00000340647 AGBL3Q8NEM8 1001 aa21.61■■□□□ 1.05
BRCC3-202ENST00000340647 ANKRD2Q9GZV1 360 aa21.61■■□□□ 1.05
BRCC3-202ENST00000340647 C9orf78Q9NZ63 289 aaPredicted RBP21.61■■□□□ 1.05
BRCC3-202ENST00000340647 TLL2Q9Y6L7 1015 aa21.61■■□□□ 1.05
BRCC3-202ENST00000340647 KIF4BQ2VIQ3 1234 aa21.6■■□□□ 1.05
BRCC3-202ENST00000340647 CDC37L1Q7L3B6 337 aa21.6■■□□□ 1.05
BRCC3-202ENST00000340647 ANKRD44Q8N8A2 993 aa21.6■■□□□ 1.05
BRCC3-202ENST00000340647 G3V3G9 751 aa21.59■■□□□ 1.05
BRCC3-202ENST00000340647 CELF2O95319 508 aaKnown RBP21.59■■□□□ 1.05
BRCC3-202ENST00000340647 LBX1P52954 281 aa21.59■■□□□ 1.05
BRCC3-202ENST00000340647 ALDH1L2Q3SY69 923 aa21.59■■□□□ 1.05
BRCC3-202ENST00000340647 RABL6Q3YEC7 729 aaPredicted RBP21.59■■□□□ 1.05
BRCC3-202ENST00000340647 DCAF8Q5TAQ9 597 aa21.59■■□□□ 1.05
BRCC3-202ENST00000340647 SAPCD2Q86UD0 394 aa21.59■■□□□ 1.05
BRCC3-202ENST00000340647 AIDAQ96BJ3 306 aa21.59■■□□□ 1.05
BRCC3-202ENST00000340647 PUS3Q9BZE2 481 aaKnown RBP21.59■■□□□ 1.05
BRCC3-202ENST00000340647 COA1Q9GZY4 146 aa21.59■■□□□ 1.05
BRCC3-202ENST00000340647 USP44Q9H0E7 712 aa21.59■■□□□ 1.05
BRCC3-202ENST00000340647 ABT1Q9ULW3 272 aaKnown RBP21.59■■□□□ 1.05
BRCC3-202ENST00000340647 WDR33Q9C0J8 1336 aaKnown RBP21.58■■□□□ 1.05
BRCC3-202ENST00000340647 ADM5C9JUS6 153 aa21.58■■□□□ 1.05
BRCC3-202ENST00000340647 C15orf52Q6ZUT6 534 aaKnown RBP21.58■■□□□ 1.05
BRCC3-202ENST00000340647 MIER1Q8N108 512 aa21.58■■□□□ 1.05
BRCC3-202ENST00000340647 BICC1Q9H694 974 aaKnown RBP21.58■■□□□ 1.05
BRCC3-202ENST00000340647 CHMP3Q9Y3E7 222 aa21.58■■□□□ 1.05
BRCC3-202ENST00000340647 CYP4F22Q6NT55 531 aa21.57■■□□□ 1.04
BRCC3-202ENST00000340647 CD209Q9NNX6 404 aa21.57■■□□□ 1.04
BRCC3-202ENST00000340647 USP17L8P0C7I0 530 aa21.56■■□□□ 1.04
BRCC3-202ENST00000340647 HSPA8P11142 646 aaKnown RBP21.56■■□□□ 1.04
BRCC3-202ENST00000340647 STRIP1Q5VSL9 837 aa21.56■■□□□ 1.04
BRCC3-202ENST00000340647 BRPF1P55201 1214 aaPredicted RBP21.55■■□□□ 1.04
BRCC3-202ENST00000340647 SCARF1Q14162 830 aa21.55■■□□□ 1.04
BRCC3-202ENST00000340647 CCDC57Q2TAC2 916 aa21.55■■□□□ 1.04
BRCC3-202ENST00000340647 LDHAL6AQ6ZMR3 332 aa21.55■■□□□ 1.04
BRCC3-202ENST00000340647 KRT26Q7Z3Y9 468 aa21.55■■□□□ 1.04
BRCC3-202ENST00000340647 CAPNS2Q96L46 248 aa21.55■■□□□ 1.04
BRCC3-202ENST00000340647 MYOZ2Q9NPC6 264 aa21.55■■□□□ 1.04
BRCC3-202ENST00000340647 GGA3Q9NZ52 723 aa21.55■■□□□ 1.04
BRCC3-202ENST00000340647 RIPOR2Q9Y4F9 1068 aa21.55■■□□□ 1.04
BRCC3-202ENST00000340647 CERS5Q8N5B7 392 aa21.54■■□□□ 1.04
BRCC3-202ENST00000340647 SCAF8Q9UPN6 1271 aaKnown RBP21.54■■□□□ 1.04
BRCC3-202ENST00000340647 NBPF9Q3BBW0 867 aa21.53■■□□□ 1.04
BRCC3-202ENST00000340647 TTLL5Q6EMB2 1281 aa21.53■■□□□ 1.04
BRCC3-202ENST00000340647 ZNF408Q9H9D4 720 aa21.53■■□□□ 1.04
BRCC3-202ENST00000340647 SMC4Q9NTJ3 1288 aa21.53■■□□□ 1.04
BRCC3-202ENST00000340647 ECM29Q5VYK3 1845 aa21.52■■□□□ 1.04
BRCC3-202ENST00000340647 CT47B1P0C2W7 299 aaPredicted RBP21.52■■□□□ 1.04
BRCC3-202ENST00000340647 IL1R1P14778 569 aa21.52■■□□□ 1.04
BRCC3-202ENST00000340647 RARSP54136 660 aaKnown RBP21.52■■□□□ 1.04
BRCC3-202ENST00000340647 GTF2IP78347 998 aa21.52■■□□□ 1.04
BRCC3-202ENST00000340647 LRRC24Q50LG9 513 aa21.52■■□□□ 1.04
BRCC3-202ENST00000340647 ANGEL2Q5VTE6 544 aaKnown RBP21.52■■□□□ 1.04
BRCC3-202ENST00000340647 ZBED3Q96IU2 234 aaPredicted RBP21.52■■□□□ 1.04
BRCC3-202ENST00000340647 NOB1Q9ULX3 412 aaKnown RBP21.52■■□□□ 1.04
BRCC3-202ENST00000340647 AOC2O75106 756 aa21.51■■□□□ 1.03
BRCC3-202ENST00000340647 RFX5P48382 616 aaPredicted RBP21.51■■□□□ 1.03
BRCC3-202ENST00000340647 KLHDC4Q8TBB5 520 aa21.51■■□□□ 1.03
BRCC3-202ENST00000340647 DCPSQ96C86 337 aaKnown RBP21.51■■□□□ 1.03
BRCC3-202ENST00000340647 HHIPL1Q96JK4 782 aa21.51■■□□□ 1.03
BRCC3-202ENST00000340647 ZIC5Q96T25 663 aa21.51■■□□□ 1.03
BRCC3-202ENST00000340647 CNNM1Q9NRU3 951 aa21.51■■□□□ 1.03
BRCC3-202ENST00000340647 WNT10BO00744 389 aa21.5■■□□□ 1.03
BRCC3-202ENST00000340647 PLIN1O60240 522 aa21.5■■□□□ 1.03
BRCC3-202ENST00000340647 KCNJ4P48050 445 aa21.5■■□□□ 1.03
BRCC3-202ENST00000340647 MAP2K1Q02750 393 aaPredicted RBP21.5■■□□□ 1.03
BRCC3-202ENST00000340647 VGLL2Q8N8G2 317 aa21.5■■□□□ 1.03
BRCC3-202ENST00000340647 KIAA0825Q8IV33 1275 aa21.49■■□□□ 1.03
BRCC3-202ENST00000340647 FBXW7Q969H0 707 aa21.49■■□□□ 1.03
BRCC3-202ENST00000340647 PCDHAC2Q9Y5I4 1007 aa21.49■■□□□ 1.03
BRCC3-202ENST00000340647 MYO3BQ8WXR4 1341 aa21.49■■□□□ 1.03
BRCC3-202ENST00000340647 ARAP2Q8WZ64 1704 aa21.49■■□□□ 1.03
BRCC3-202ENST00000340647 TAF7LQ5H9L4 462 aa21.48■■□□□ 1.03
BRCC3-202ENST00000340647 DIEXFQ68CQ4 756 aaKnown RBP21.48■■□□□ 1.03
BRCC3-202ENST00000340647 CDCA5Q96FF9 252 aa21.48■■□□□ 1.03
BRCC3-202ENST00000340647 ABHD8Q96I13 439 aa21.48■■□□□ 1.03
BRCC3-202ENST00000340647 FAM84BQ96KN1 310 aaPredicted RBP21.48■■□□□ 1.03
BRCC3-202ENST00000340647 AOX1Q06278 1338 aa21.48■■□□□ 1.03
BRCC3-202ENST00000340647 PITPNM2Q9BZ72 1349 aa21.48■■□□□ 1.03
BRCC3-202ENST00000340647 FAM155AB1AL88 458 aaPredicted RBP21.47■■□□□ 1.03
BRCC3-202ENST00000340647 UBE4AQ14139 1066 aa21.47■■□□□ 1.03
BRCC3-202ENST00000340647 GBA2Q9HCG7 927 aaPredicted RBP21.47■■□□□ 1.03
BRCC3-202ENST00000340647 TNNQ9UQP3 1299 aa21.47■■□□□ 1.03
BRCC3-202ENST00000340647 JAG2Q9Y219 1238 aa21.47■■□□□ 1.03
BRCC3-202ENST00000340647 SASH1O94885 1247 aa21.46■■□□□ 1.03
BRCC3-202ENST00000340647 ECE1P42892 770 aa21.46■■□□□ 1.03
BRCC3-202ENST00000340647 GYG1P46976 350 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms