RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 ARFGAP2Q8N6H7 521 aa15.65■□□□□ 0.1
PDE4D-203ENST00000340635 C16orf71Q8IYS4 520 aaPredicted RBP15.64■□□□□ 0.09
PDE4D-203ENST00000340635 DNAI1Q9UI46 699 aa15.64■□□□□ 0.09
PDE4D-203ENST00000340635 CFAP65Q6ZU64 1925 aaKnown RBP15.64■□□□□ 0.09
PDE4D-203ENST00000340635 VAV2P52735 878 aa15.64■□□□□ 0.09
PDE4D-203ENST00000340635 GSTO1P78417 241 aa15.64■□□□□ 0.09
PDE4D-203ENST00000340635 ZNF131P52739 623 aa15.64■□□□□ 0.09
PDE4D-203ENST00000340635 TSNAXIP1Q2TAA8 658 aa15.64■□□□□ 0.09
PDE4D-203ENST00000340635 MCUR1Q96AQ8 359 aa15.64■□□□□ 0.09
PDE4D-203ENST00000340635 TSGA10Q9BZW7 698 aa15.64■□□□□ 0.09
PDE4D-203ENST00000340635 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.64■□□□□ 0.09
PDE4D-203ENST00000340635 NEK11Q8NG66 645 aa15.64■□□□□ 0.09
PDE4D-203ENST00000340635 TFIP11Q9UBB9 837 aaKnown RBP15.64■□□□□ 0.09
PDE4D-203ENST00000340635 FAM76AQ8TAV0 307 aa15.64■□□□□ 0.09
PDE4D-203ENST00000340635 JPH4Q96JJ6 628 aa15.64■□□□□ 0.09
PDE4D-203ENST00000340635 DAPK3O43293 454 aa15.63■□□□□ 0.09
PDE4D-203ENST00000340635 FAM69CQ0P6D2 419 aa15.63■□□□□ 0.09
PDE4D-203ENST00000340635 CDK19Q9BWU1 502 aa15.63■□□□□ 0.09
PDE4D-203ENST00000340635 ANKRD30BQ9BXX2 1392 aa15.63■□□□□ 0.09
PDE4D-203ENST00000340635 STX8Q9UNK0 236 aa15.63■□□□□ 0.09
PDE4D-203ENST00000340635 HEATR3Q7Z4Q2 680 aa15.63■□□□□ 0.09
PDE4D-203ENST00000340635 ASIC1P78348 528 aa15.63■□□□□ 0.09
PDE4D-203ENST00000340635 VCX3AQ9NNX9 186 aa15.63■□□□□ 0.09
PDE4D-203ENST00000340635 PDCD7Q8N8D1 485 aaKnown RBP15.63■□□□□ 0.09
PDE4D-203ENST00000340635 TXNDC9O14530 226 aa15.63■□□□□ 0.09
PDE4D-203ENST00000340635 RASSF4Q9H2L5 321 aa15.63■□□□□ 0.09
PDE4D-203ENST00000340635 SMARCA5O60264 1052 aaPredicted RBP15.62■□□□□ 0.09
PDE4D-203ENST00000340635 BMP15O95972 392 aa15.62■□□□□ 0.09
PDE4D-203ENST00000340635 HSP90AA4PQ58FG1 418 aa15.62■□□□□ 0.09
PDE4D-203ENST00000340635 CRNKL1Q9BZJ0 848 aaKnown RBP15.62■□□□□ 0.09
PDE4D-203ENST00000340635 NAA16Q6N069 864 aaPredicted RBP15.62■□□□□ 0.09
PDE4D-203ENST00000340635 SMIM24O75264 130 aa15.62■□□□□ 0.09
PDE4D-203ENST00000340635 RILPL1Q5EBL4 403 aa15.62■□□□□ 0.09
PDE4D-203ENST00000340635 UBE2HP62256 183 aa15.62■□□□□ 0.09
PDE4D-203ENST00000340635 TNNC1P63316 161 aa15.62■□□□□ 0.09
PDE4D-203ENST00000340635 RNF168Q8IYW5 571 aaPredicted RBP15.62■□□□□ 0.09
PDE4D-203ENST00000340635 SMARCC2Q8TAQ2 1214 aa15.62■□□□□ 0.09
PDE4D-203ENST00000340635 SPAG1Q07617 926 aa15.62■□□□□ 0.09
PDE4D-203ENST00000340635 IFIT1BQ5T764 474 aaKnown RBP15.62■□□□□ 0.09
PDE4D-203ENST00000340635 NCOA7Q8NI08 942 aa15.62■□□□□ 0.09
PDE4D-203ENST00000340635 RAPGEF2Q9Y4G8 1499 aa15.62■□□□□ 0.09
PDE4D-203ENST00000340635 KRT5P13647 590 aa15.62■□□□□ 0.09
PDE4D-203ENST00000340635 CCDC42Q96M95 316 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 ORC3Q9UBD5 711 aaPredicted RBP15.61■□□□□ 0.09
PDE4D-203ENST00000340635 AKNAQ7Z591 1439 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 MCM7P33993 719 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 CCDC8Q9H0W5 538 aaPredicted RBP15.61■□□□□ 0.09
PDE4D-203ENST00000340635 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 ARHGAP24Q8N264 748 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 CCDC26Q8TAB7 109 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 ZBTB24O43167 697 aaPredicted RBP15.61■□□□□ 0.09
PDE4D-203ENST00000340635 B4GALNT4Q76KP1 1039 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 CDC5LQ99459 802 aaKnown RBP15.61■□□□□ 0.09
PDE4D-203ENST00000340635 SPDYE3A6NKU9 549 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 ZNF622Q969S3 477 aaKnown RBP eCLIP15.61■□□□□ 0.09
PDE4D-203ENST00000340635 TUBBP07437 444 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 PPP2R5DQ14738 602 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 C10orf67Q8IYJ2 551 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 KIFAP3Q92845 792 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 NACA2Q9H009 215 aa15.61■□□□□ 0.09
PDE4D-203ENST00000340635 ZSCAN16Q9H4T2 348 aaPredicted RBP15.61■□□□□ 0.09
PDE4D-203ENST00000340635 A0A1B0GUL7 405 aa15.6■□□□□ 0.09
PDE4D-203ENST00000340635 LRRC43Q8N309 656 aa15.6■□□□□ 0.09
PDE4D-203ENST00000340635 HAUS8Q9BT25 410 aa15.6■□□□□ 0.09
PDE4D-203ENST00000340635 STX10O60499 249 aa15.6■□□□□ 0.09
PDE4D-203ENST00000340635 CLSTN2Q9H4D0 955 aa15.6■□□□□ 0.09
PDE4D-203ENST00000340635 UBXN1Q04323 297 aa15.6■□□□□ 0.09
PDE4D-203ENST00000340635 EVI5LQ96CN4 794 aa15.6■□□□□ 0.09
PDE4D-203ENST00000340635 LARP6Q9BRS8 491 aaKnown RBP15.6■□□□□ 0.09
PDE4D-203ENST00000340635 I3L4J1 428 aa15.6■□□□□ 0.09
PDE4D-203ENST00000340635 CCT6AP40227 531 aaKnown RBP15.6■□□□□ 0.09
PDE4D-203ENST00000340635 WTAPQ15007 396 aa15.6■□□□□ 0.09
PDE4D-203ENST00000340635 BANK1Q8NDB2 785 aa15.6■□□□□ 0.09
PDE4D-203ENST00000340635 LEO1Q8WVC0 666 aaPredicted RBP15.6■□□□□ 0.09
PDE4D-203ENST00000340635 MRRFQ96E11 262 aaKnown RBP15.59■□□□□ 0.09
PDE4D-203ENST00000340635 SKILP12757 684 aa15.59■□□□□ 0.09
PDE4D-203ENST00000340635 CLNS1AP54105 237 aaKnown RBP15.59■□□□□ 0.09
PDE4D-203ENST00000340635 ST5P78524 1137 aa15.59■□□□□ 0.09
PDE4D-203ENST00000340635 HS2ST1Q7LGA3 356 aa15.59■□□□□ 0.09
PDE4D-203ENST00000340635 GDPD2Q9HCC8 539 aa15.59■□□□□ 0.09
PDE4D-203ENST00000340635 GUCA1BQ9UMX6 200 aa15.59■□□□□ 0.09
PDE4D-203ENST00000340635 TRIM6Q9C030 488 aaPredicted RBP15.59■□□□□ 0.09
PDE4D-203ENST00000340635 SYT1P21579 422 aa15.59■□□□□ 0.09
PDE4D-203ENST00000340635 TAOK1Q7L7X3 1001 aa15.59■□□□□ 0.09
PDE4D-203ENST00000340635 BIN2Q9UBW5 565 aaPredicted RBP15.59■□□□□ 0.09
PDE4D-203ENST00000340635 KRT9P35527 623 aa15.59■□□□□ 0.09
PDE4D-203ENST00000340635 CCDC125Q86Z20 511 aa15.59■□□□□ 0.09
PDE4D-203ENST00000340635 HPDP32754 393 aaPredicted RBP15.59■□□□□ 0.09
PDE4D-203ENST00000340635 CDR2Q01850 454 aa15.59■□□□□ 0.09
PDE4D-203ENST00000340635 RUFY3Q7L099 469 aa15.59■□□□□ 0.09
PDE4D-203ENST00000340635 MPRIPQ6WCQ1 1025 aa15.58■□□□□ 0.09
PDE4D-203ENST00000340635 MIER3Q7Z3K6 550 aa15.58■□□□□ 0.09
PDE4D-203ENST00000340635 NSMCE1Q8WV22 266 aa15.58■□□□□ 0.09
PDE4D-203ENST00000340635 FRMD4BQ9Y2L6 1034 aa15.58■□□□□ 0.09
PDE4D-203ENST00000340635 HAND2P61296 217 aa15.58■□□□□ 0.08
PDE4D-203ENST00000340635 RRS1Q15050 365 aaKnown RBP15.58■□□□□ 0.08
PDE4D-203ENST00000340635 WDR44Q5JSH3 913 aa15.58■□□□□ 0.08
PDE4D-203ENST00000340635 TNPO1Q92973 898 aaKnown RBP15.58■□□□□ 0.08
PDE4D-203ENST00000340635 XAB2Q9HCS7 855 aaKnown RBP15.58■□□□□ 0.08
PDE4D-203ENST00000340635 CXorf38Q8TB03 319 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms