RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 TNNQ9UQP3 1299 aa19.39■□□□□ 0.69
VAPA-201ENST00000340541 CHMP3Q9Y3E7 222 aa19.39■□□□□ 0.69
VAPA-201ENST00000340541 SCN9AQ15858 1988 aa19.39■□□□□ 0.69
VAPA-201ENST00000340541 CELF2O95319 508 aaKnown RBP19.38■□□□□ 0.69
VAPA-201ENST00000340541 HSPA8P11142 646 aaKnown RBP19.38■□□□□ 0.69
VAPA-201ENST00000340541 TRIM27P14373 513 aa19.38■□□□□ 0.69
VAPA-201ENST00000340541 ATP2B4P23634 1241 aa19.38■□□□□ 0.69
VAPA-201ENST00000340541 ZNF594Q96JF6 807 aaPredicted RBP19.38■□□□□ 0.69
VAPA-201ENST00000340541 DBNDD1Q9H9R9 158 aa19.38■□□□□ 0.69
VAPA-201ENST00000340541 PSMD14O00487 310 aa19.37■□□□□ 0.69
VAPA-201ENST00000340541 CCDC57Q2TAC2 916 aa19.37■□□□□ 0.69
VAPA-201ENST00000340541 INTS3Q68E01 1043 aaKnown RBP19.37■□□□□ 0.69
VAPA-201ENST00000340541 CYP4F22Q6NT55 531 aa19.37■□□□□ 0.69
VAPA-201ENST00000340541 PAXIP1Q6ZW49 1069 aaPredicted RBP19.37■□□□□ 0.69
VAPA-201ENST00000340541 MICALL2Q8IY33 904 aa19.37■□□□□ 0.69
VAPA-201ENST00000340541 MPHOSPH8Q99549 860 aa19.37■□□□□ 0.69
VAPA-201ENST00000340541 GLIS2Q9BZE0 524 aaPredicted RBP19.37■□□□□ 0.69
VAPA-201ENST00000340541 ZC3H12CQ9C0D7 883 aaKnown RBP19.37■□□□□ 0.69
VAPA-201ENST00000340541 THSD7BQ9C0I4 1608 aa19.36■□□□□ 0.69
VAPA-201ENST00000340541 IPO8O15397 1037 aaKnown RBP19.36■□□□□ 0.69
VAPA-201ENST00000340541 CHRNDQ07001 517 aa19.36■□□□□ 0.69
VAPA-201ENST00000340541 DOK7Q18PE1 504 aa19.36■□□□□ 0.69
VAPA-201ENST00000340541 ATF7IPQ6VMQ6 1270 aa19.36■□□□□ 0.69
VAPA-201ENST00000340541 TRPM4Q8TD43 1214 aa19.36■□□□□ 0.69
VAPA-201ENST00000340541 MED23Q9ULK4 1368 aa19.35■□□□□ 0.69
VAPA-201ENST00000340541 CA12O43570 354 aa19.35■□□□□ 0.69
VAPA-201ENST00000340541 ECE2O60344 883 aa19.35■□□□□ 0.69
VAPA-201ENST00000340541 VIL1P09327 827 aaKnown RBP19.35■□□□□ 0.69
VAPA-201ENST00000340541 FRAT1Q92837 279 aaPredicted RBP19.35■□□□□ 0.69
VAPA-201ENST00000340541 ANKRD2Q9GZV1 360 aa19.35■□□□□ 0.69
VAPA-201ENST00000340541 KCNQ5Q9NR82 932 aa19.35■□□□□ 0.69
VAPA-201ENST00000340541 ZBTB12Q9Y330 459 aaPredicted RBP19.35■□□□□ 0.69
VAPA-201ENST00000340541 LEMD3Q9Y2U8 911 aa19.34■□□□□ 0.69
VAPA-201ENST00000340541 PSME4Q14997 1843 aa19.34■□□□□ 0.69
VAPA-201ENST00000340541 ZNF804BA4D1E1 1349 aa19.33■□□□□ 0.69
VAPA-201ENST00000340541 IRS2Q9Y4H2 1338 aa19.33■□□□□ 0.69
VAPA-201ENST00000340541 KLRK1P26718 216 aa19.33■□□□□ 0.68
VAPA-201ENST00000340541 ZKSCAN2Q63HK3 967 aa19.33■□□□□ 0.68
VAPA-201ENST00000340541 LDHAL6AQ6ZMR3 332 aa19.33■□□□□ 0.68
VAPA-201ENST00000340541 TXNRD3Q86VQ6 643 aa19.33■□□□□ 0.68
VAPA-201ENST00000340541 MEIS3Q99687 375 aa19.33■□□□□ 0.68
VAPA-201ENST00000340541 G3V3G9 751 aa19.32■□□□□ 0.68
VAPA-201ENST00000340541 SNAP23O00161 211 aa19.32■□□□□ 0.68
VAPA-201ENST00000340541 TAF5LO75529 589 aa19.32■□□□□ 0.68
VAPA-201ENST00000340541 UBTFL1P0CB47 393 aaPredicted RBP19.32■□□□□ 0.68
VAPA-201ENST00000340541 DCAF8Q5TAQ9 597 aa19.32■□□□□ 0.68
VAPA-201ENST00000340541 SAMD7Q7Z3H4 446 aa19.32■□□□□ 0.68
VAPA-201ENST00000340541 USP48Q86UV5 1035 aa19.32■□□□□ 0.68
VAPA-201ENST00000340541 HELBQ8NG08 1087 aaPredicted RBP19.32■□□□□ 0.68
VAPA-201ENST00000340541 CLUAP1Q96AJ1 413 aa19.32■□□□□ 0.68
VAPA-201ENST00000340541 PUS3Q9BZE2 481 aaKnown RBP19.32■□□□□ 0.68
VAPA-201ENST00000340541 ZNF646O15015 1829 aaPredicted RBP19.32■□□□□ 0.68
VAPA-201ENST00000340541 SHTN1A0MZ66 631 aa19.31■□□□□ 0.68
VAPA-201ENST00000340541 RFX5P48382 616 aaPredicted RBP19.31■□□□□ 0.68
VAPA-201ENST00000340541 GRM1Q13255 1194 aa19.31■□□□□ 0.68
VAPA-201ENST00000340541 TAF7LQ5H9L4 462 aa19.31■□□□□ 0.68
VAPA-201ENST00000340541 DCPSQ96C86 337 aaKnown RBP19.31■□□□□ 0.68
VAPA-201ENST00000340541 NOGQ13253 232 aa19.3■□□□□ 0.68
VAPA-201ENST00000340541 TBC1D10BQ4KMP7 808 aaPredicted RBP19.3■□□□□ 0.68
VAPA-201ENST00000340541 KRT26Q7Z3Y9 468 aa19.3■□□□□ 0.68
VAPA-201ENST00000340541 AGBL3Q8NEM8 1001 aa19.3■□□□□ 0.68
VAPA-201ENST00000340541 ZNF408Q9H9D4 720 aa19.3■□□□□ 0.68
VAPA-201ENST00000340541 CNNM1Q9NRU3 951 aa19.3■□□□□ 0.68
VAPA-201ENST00000340541 RIPOR2Q9Y4F9 1068 aa19.3■□□□□ 0.68
VAPA-201ENST00000340541 LRRFIP2Q9Y608 721 aaKnown RBP19.3■□□□□ 0.68
VAPA-201ENST00000340541 ZNF609O15014 1411 aa19.3■□□□□ 0.68
VAPA-201ENST00000340541 AOC2O75106 756 aa19.29■□□□□ 0.68
VAPA-201ENST00000340541 C15orf52Q6ZUT6 534 aaKnown RBP19.29■□□□□ 0.68
VAPA-201ENST00000340541 PODNQ7Z5L7 613 aa19.29■□□□□ 0.68
VAPA-201ENST00000340541 TMEM57Q8N5G2 664 aa19.29■□□□□ 0.68
VAPA-201ENST00000340541 KLHDC4Q8TBB5 520 aa19.29■□□□□ 0.68
VAPA-201ENST00000340541 LRRC24Q50LG9 513 aa19.28■□□□□ 0.68
VAPA-201ENST00000340541 C2orf69Q8N8R5 385 aa19.28■□□□□ 0.68
VAPA-201ENST00000340541 RLBP1P12271 317 aa19.27■□□□□ 0.68
VAPA-201ENST00000340541 KCNJ4P48050 445 aa19.27■□□□□ 0.68
VAPA-201ENST00000340541 HUNKP57058 714 aa19.27■□□□□ 0.68
VAPA-201ENST00000340541 ZNF280AP59817 542 aaPredicted RBP19.27■□□□□ 0.68
VAPA-201ENST00000340541 KIF4BQ2VIQ3 1234 aa19.27■□□□□ 0.68
VAPA-201ENST00000340541 RSBN1LQ6PCB5 846 aaPredicted RBP19.27■□□□□ 0.68
VAPA-201ENST00000340541 ABHD8Q96I13 439 aa19.27■□□□□ 0.68
VAPA-201ENST00000340541 COA1Q9GZY4 146 aa19.27■□□□□ 0.68
VAPA-201ENST00000340541 EGFRP00533 1210 aa19.26■□□□□ 0.67
VAPA-201ENST00000340541 GNAI3P08754 354 aa19.26■□□□□ 0.67
VAPA-201ENST00000340541 PTPN12Q05209 780 aaKnown RBP19.26■□□□□ 0.67
VAPA-201ENST00000340541 RBM26Q5T8P6 1007 aaKnown RBP19.26■□□□□ 0.67
VAPA-201ENST00000340541 VGLL2Q8N8G2 317 aa19.26■□□□□ 0.67
VAPA-201ENST00000340541 CCDC102AQ96A19 550 aa19.26■□□□□ 0.67
VAPA-201ENST00000340541 GBA2Q9HCG7 927 aaPredicted RBP19.26■□□□□ 0.67
VAPA-201ENST00000340541 POLR2AP24928 1970 aaKnown RBP19.26■□□□□ 0.67
VAPA-201ENST00000340541 MROH5Q6ZUA9 1318 aa19.25■□□□□ 0.67
VAPA-201ENST00000340541 PLIN1O60240 522 aa19.25■□□□□ 0.67
VAPA-201ENST00000340541 MMP14P50281 582 aa19.25■□□□□ 0.67
VAPA-201ENST00000340541 RGMBQ6NW40 437 aa19.25■□□□□ 0.67
VAPA-201ENST00000340541 SULF1Q8IWU6 871 aa19.25■□□□□ 0.67
VAPA-201ENST00000340541 GMLQ99445 158 aa19.25■□□□□ 0.67
VAPA-201ENST00000340541 HDAC5Q9UQL6 1122 aa19.25■□□□□ 0.67
VAPA-201ENST00000340541 USP17L3A6NCW0 530 aa19.24■□□□□ 0.67
VAPA-201ENST00000340541 USP17L4A6NCW7 530 aa19.24■□□□□ 0.67
VAPA-201ENST00000340541 USP17L1Q7RTZ2 530 aa19.24■□□□□ 0.67
VAPA-201ENST00000340541 DZIP1LQ8IYY4 767 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms