RNA–Protein interactions for RNA: ENST00000340001.8

ABCA9-201, Transcript of ATP binding cassette subfamily A member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA9, Length 6,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-201ENST00000340001 CCDC65Q8IXS2 484 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 MRPL50Q8N5N7 158 aaKnown RBP8.3□□□□□ -1.08
ABCA9-201ENST00000340001 WASF1Q92558 559 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 ECHDC1Q9NTX5 307 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 ODF2LQ9ULJ1 636 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 PPME1Q9Y570 386 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 PLEKHH1Q9ULM0 1364 aa8.3□□□□□ -1.08
ABCA9-201ENST00000340001 CCDC66A2RUB6 948 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 METAP2P50579 478 aaKnown RBP eCLIP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 SPA17Q15506 151 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 GEN1Q17RS7 908 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 GADL1Q6ZQY3 521 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 ABCF3Q9NUQ8 709 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 CWC25Q9NXE8 425 aaPredicted RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 TMOD4Q9NZQ9 345 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 COPS6Q7L5N1 327 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 RHPN1Q8TCX5 695 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 MICAL1Q8TDZ2 1067 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 PHACTR3Q96KR7 559 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 NLRP3Q96P20 1036 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 SUDS3Q9H7L9 328 aaPredicted RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 NDUFB9Q9Y6M9 179 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 HLTFQ14527 1009 aaKnown RBP eCLIP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 MTHFSDQ2M296 383 aaKnown RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 MTERF4Q7Z6M4 381 aaKnown RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 GOLGA6CA6NDK9 693 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 GOLGA6BA6NDN3 693 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 GOLGA6DP0CG33 693 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 KIF22Q14807 665 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 FKBP15Q5T1M5 1219 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 ZKSCAN3Q9BRR0 538 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 PHAXQ9H814 394 aaKnown RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 GOLGA6AQ9NYA3 693 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 ORC3Q9UBD5 711 aaPredicted RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 NOP56O00567 594 aaKnown RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 RIOK3O14730 519 aaKnown RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 TBCAO75347 108 aaKnown RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 PLCB3Q01970 1234 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 NMIQ13287 307 aaPredicted RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 EIF4A2Q14240 407 aaKnown RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 OTUD7AQ8TE49 926 aaPredicted RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 KLF18A0A0U1RQI7 1052 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 SESTD1Q86VW0 696 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 CCDC50Q8IVM0 306 aa8.29□□□□□ -1.08
ABCA9-201ENST00000340001 C14orf93Q9H972 538 aaKnown RBP8.29□□□□□ -1.08
ABCA9-201ENST00000340001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.28□□□□□ -1.08
ABCA9-201ENST00000340001 KIAA0754O94854 1291 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 ERCC3P19447 782 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 SPECC1Q5M775 1068 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 CCDC129Q6ZRS4 1044 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 CCDC148Q8NFR7 591 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 FAM107BQ9H098 131 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 GPCPD1Q9NPB8 672 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 PRDM5Q9NQX1 630 aaPredicted RBP8.28□□□□□ -1.08
ABCA9-201ENST00000340001 RBM8AQ9Y5S9 174 aaKnown RBP8.28□□□□□ -1.08
ABCA9-201ENST00000340001 MSH6P52701 1360 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 ERCC5P28715 1186 aaPredicted RBP8.28□□□□□ -1.08
ABCA9-201ENST00000340001 ACTN2P35609 894 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 BMP2KLQ5H9B9 411 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 TIGD1Q96MW7 591 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 KDM5BQ9UGL1 1544 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 GPATCH8Q9UKJ3 1502 aaKnown RBP8.28□□□□□ -1.08
ABCA9-201ENST00000340001 AMOTQ4VCS5 1084 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 JAKMIP2Q96AA8 810 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 CALML4Q96GE6 196 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 SYNDIG1Q9H7V2 258 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 BTG4Q9NY30 223 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 SMIM23A6NLE4 172 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 PDE1AP54750 535 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 PPP1R21Q6ZMI0 780 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 SH2B1Q9NRF2 756 aaPredicted RBP8.28□□□□□ -1.08
ABCA9-201ENST00000340001 KLHDC4Q8TBB5 520 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 DNAJC25Q9H1X3 360 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 ABCC11Q96J66 1382 aa8.28□□□□□ -1.08
ABCA9-201ENST00000340001 PTGS1P23219 599 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 PRIM1P49642 420 aaKnown RBP8.27□□□□□ -1.09
ABCA9-201ENST00000340001 PDE4BQ07343 736 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 APOBRQ0VD83 1088 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 TMCO3Q6UWJ1 677 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 CARD14Q9BXL6 1004 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 PIK3R4Q99570 1358 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 ERLIN1O75477 346 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 GSTA5Q7RTV2 222 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 NFATC2IPQ8NCF5 419 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 HINFPQ9BQA5 517 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 SCAND2PQ9GZW5 306 aaPredicted RBP8.27□□□□□ -1.09
ABCA9-201ENST00000340001 TTC12Q9H892 705 aaPredicted RBP8.27□□□□□ -1.09
ABCA9-201ENST00000340001 POLIQ9UNA4 740 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 SLC4A4Q9Y6R1 1079 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 KIF5CO60282 957 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 MFSD6Q6ZSS7 791 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 ESYT1Q9BSJ8 1104 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 ITSN2Q9NZM3 1697 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 IGSF3O75054 1194 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 ZSCAN22P10073 491 aaPredicted RBP8.27□□□□□ -1.09
ABCA9-201ENST00000340001 IARSP41252 1262 aaKnown RBP8.27□□□□□ -1.09
ABCA9-201ENST00000340001 USH1GQ495M9 461 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 TRAPPC3LQ5T215 181 aa8.27□□□□□ -1.09
ABCA9-201ENST00000340001 ANKRD13DQ6ZTN6 518 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms