RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 DMRTA1Q5VZB9 504 aa7.75□□□□□ -1.17
ZNF28-201ENST00000339844 INTS3Q68E01 1043 aaKnown RBP7.75□□□□□ -1.17
ZNF28-201ENST00000339844 TTLL7Q6ZT98 887 aa7.75□□□□□ -1.17
ZNF28-201ENST00000339844 DZIP3Q86Y13 1208 aaKnown RBP7.75□□□□□ -1.17
ZNF28-201ENST00000339844 NLGN1Q8N2Q7 840 aa7.75□□□□□ -1.17
ZNF28-201ENST00000339844 NLRP7Q8WX94 980 aa7.75□□□□□ -1.17
ZNF28-201ENST00000339844 FHDC1Q9C0D6 1143 aaPredicted RBP7.75□□□□□ -1.17
ZNF28-201ENST00000339844 NBPF3Q9H094 633 aa7.75□□□□□ -1.17
ZNF28-201ENST00000339844 CHPF2Q9P2E5 772 aa7.75□□□□□ -1.17
ZNF28-201ENST00000339844 FAM198AQ9UFP1 575 aa7.75□□□□□ -1.17
ZNF28-201ENST00000339844 RABGEF1Q9UJ41 708 aa7.75□□□□□ -1.17
ZNF28-201ENST00000339844 ERBB4Q15303 1308 aa7.75□□□□□ -1.17
ZNF28-201ENST00000339844 SCN7AQ01118 1682 aa7.74□□□□□ -1.17
ZNF28-201ENST00000339844 POLRMTO00411 1230 aaKnown RBP7.74□□□□□ -1.17
ZNF28-201ENST00000339844 TM4SF1P30408 202 aa7.74□□□□□ -1.17
ZNF28-201ENST00000339844 TERF1P54274 439 aa7.74□□□□□ -1.17
ZNF28-201ENST00000339844 HLFQ16534 295 aa7.74□□□□□ -1.17
ZNF28-201ENST00000339844 TBC1D9BQ66K14 1250 aa7.74□□□□□ -1.17
ZNF28-201ENST00000339844 BICDL1Q6ZP65 573 aa7.74□□□□□ -1.17
ZNF28-201ENST00000339844 UBE2Q2Q8WVN8 375 aa7.74□□□□□ -1.17
ZNF28-201ENST00000339844 TNPO1Q92973 898 aaKnown RBP7.74□□□□□ -1.17
ZNF28-201ENST00000339844 PPP1R9BQ96SB3 815 aa7.74□□□□□ -1.17
ZNF28-201ENST00000339844 PHOX2BQ99453 314 aa7.74□□□□□ -1.17
ZNF28-201ENST00000339844 KIF2CQ99661 725 aa7.74□□□□□ -1.17
ZNF28-201ENST00000339844 SYT17Q9BSW7 474 aa7.74□□□□□ -1.17
ZNF28-201ENST00000339844 SSTR3P32745 418 aaPredicted RBP7.73□□□□□ -1.17
ZNF28-201ENST00000339844 CCDC173Q0VFZ6 552 aa7.73□□□□□ -1.17
ZNF28-201ENST00000339844 KLHL40Q2TBA0 621 aa7.73□□□□□ -1.17
ZNF28-201ENST00000339844 TWISTNBQ3B726 338 aaPredicted RBP7.73□□□□□ -1.17
ZNF28-201ENST00000339844 CASC1Q6TDU7 716 aa7.73□□□□□ -1.17
ZNF28-201ENST00000339844 COPS6Q7L5N1 327 aa7.73□□□□□ -1.17
ZNF28-201ENST00000339844 NLGN2Q8NFZ4 835 aa7.73□□□□□ -1.17
ZNF28-201ENST00000339844 XAGE3Q8WTP9 111 aa7.73□□□□□ -1.17
ZNF28-201ENST00000339844 ANP32BQ92688 251 aaKnown RBP7.73□□□□□ -1.17
ZNF28-201ENST00000339844 SLC4A5Q9BY07 1137 aa7.73□□□□□ -1.17
ZNF28-201ENST00000339844 LNPKQ9C0E8 428 aa7.73□□□□□ -1.17
ZNF28-201ENST00000339844 RRAGDQ9NQL2 400 aaPredicted RBP7.73□□□□□ -1.17
ZNF28-201ENST00000339844 DDX21Q9NR30 783 aaKnown RBP eCLIP7.73□□□□□ -1.17
ZNF28-201ENST00000339844 BCORQ6W2J9 1755 aa7.73□□□□□ -1.17
ZNF28-201ENST00000339844 MAP3K15Q6ZN16 1313 aa7.73□□□□□ -1.17
ZNF28-201ENST00000339844 GOLGB1Q14789 3259 aaKnown RBP7.72□□□□□ -1.17
ZNF28-201ENST00000339844 ESPNB1AK53 854 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 MCM2P49736 904 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 AIMP1Q12904 312 aaKnown RBP7.72□□□□□ -1.17
ZNF28-201ENST00000339844 GLIPR1L2Q4G1C9 344 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 POTEEQ6S8J3 1075 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 TBC1D9Q6ZT07 1266 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 ANKRD13DQ6ZTN6 518 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 SULF1Q8IWU6 871 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 ANKRD44Q8N8A2 993 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 USP26Q9BXU7 913 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 FAM117AQ9C073 453 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 ZBTB3Q9H5J0 574 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 DBF4Q9UBU7 674 aaPredicted RBP7.72□□□□□ -1.17
ZNF28-201ENST00000339844 SEPT9Q9UHD8 586 aaPredicted RBP7.72□□□□□ -1.17
ZNF28-201ENST00000339844 VPS9D1Q9Y2B5 631 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 PARP3Q9Y6F1 533 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 PTPRCP08575 1304 aa7.72□□□□□ -1.17
ZNF28-201ENST00000339844 C10orf71Q711Q0 1435 aa7.71□□□□□ -1.17
ZNF28-201ENST00000339844 GOLGA8CPA6NN73 597 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 ERVV-1B6SEH8 477 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 SERPINB2P05120 415 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 HSP90AA1P07900 732 aaKnown RBP7.71□□□□□ -1.18
ZNF28-201ENST00000339844 TPM2P07951 284 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 ZNF445P59923 1031 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 LSM11P83369 360 aaKnown RBP eCLIP7.71□□□□□ -1.18
ZNF28-201ENST00000339844 CLEC4GQ6UXB4 293 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 KIF6Q6ZMV9 814 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 G2E3Q7L622 706 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 PLEKHM2Q8IWE5 1019 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 SIRT2Q8IXJ6 389 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 CCDC24Q8N4L8 307 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 TRIM44Q96DX7 344 aaPredicted RBP7.71□□□□□ -1.18
ZNF28-201ENST00000339844 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 OSBPL3Q9H4L5 887 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 PHAXQ9H814 394 aaKnown RBP7.71□□□□□ -1.18
ZNF28-201ENST00000339844 CARMIL3Q8ND23 1372 aa7.71□□□□□ -1.18
ZNF28-201ENST00000339844 POTEB3A0JP26 581 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 TK2O00142 265 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 RRP9O43818 475 aaKnown RBP7.7□□□□□ -1.18
ZNF28-201ENST00000339844 HMMRO75330 724 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 REC8O95072 547 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 GPTP24298 496 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 MCM5P33992 734 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 TTC22Q5TAA0 569 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 CCDC30Q5VVM6 783 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 PRR5LQ6MZQ0 368 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 POTEBQ6S5H4 581 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 IL17RAQ96F46 866 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 SETDB2Q96T68 719 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 REPIN1Q9BWE0 567 aaKnown RBP7.7□□□□□ -1.18
ZNF28-201ENST00000339844 HYPKQ9NX55 129 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 NIP7Q9Y221 180 aaKnown RBP eCLIP7.7□□□□□ -1.18
ZNF28-201ENST00000339844 ZNF652Q9Y2D9 606 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 CD2APQ9Y5K6 639 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 AFDNP55196 1824 aaKnown RBP7.7□□□□□ -1.18
ZNF28-201ENST00000339844 UBN2Q6ZU65 1347 aa7.7□□□□□ -1.18
ZNF28-201ENST00000339844 ATP10DQ9P241 1426 aa7.69□□□□□ -1.18
ZNF28-201ENST00000339844 NRXN2Q9P2S2 1712 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms