RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 METTL24Q5JXM2 366 aa14.12□□□□□ -0.15
SLC28A1-202ENST00000338602 CHADLQ6NUI6 762 aa14.12□□□□□ -0.15
SLC28A1-202ENST00000338602 USP50Q70EL3 339 aaPredicted RBP14.12□□□□□ -0.15
SLC28A1-202ENST00000338602 ITPRIPQ8IWB1 547 aa14.12□□□□□ -0.15
SLC28A1-202ENST00000338602 DPF2Q92785 391 aa14.12□□□□□ -0.15
SLC28A1-202ENST00000338602 ADARB2Q9NS39 739 aaKnown RBP14.12□□□□□ -0.15
SLC28A1-202ENST00000338602 GPRC5DQ9NZD1 345 aa14.12□□□□□ -0.15
SLC28A1-202ENST00000338602 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
SLC28A1-202ENST00000338602 USP17L3A6NCW0 530 aa14.11□□□□□ -0.15
SLC28A1-202ENST00000338602 USP17L4A6NCW7 530 aa14.11□□□□□ -0.15
SLC28A1-202ENST00000338602 UBE4AQ14139 1066 aa14.11□□□□□ -0.15
SLC28A1-202ENST00000338602 C15orf52Q6ZUT6 534 aaKnown RBP14.11□□□□□ -0.15
SLC28A1-202ENST00000338602 USP17L1Q7RTZ2 530 aa14.11□□□□□ -0.15
SLC28A1-202ENST00000338602 ZNF804AQ7Z570 1209 aa14.11□□□□□ -0.15
SLC28A1-202ENST00000338602 YTHDC1Q96MU7 727 aaKnown RBP14.11□□□□□ -0.15
SLC28A1-202ENST00000338602 PUS3Q9BZE2 481 aaKnown RBP14.11□□□□□ -0.15
SLC28A1-202ENST00000338602 TNNQ9UQP3 1299 aa14.11□□□□□ -0.15
SLC28A1-202ENST00000338602 RIPOR2Q9Y4F9 1068 aa14.11□□□□□ -0.15
SLC28A1-202ENST00000338602 EYA2O00167 538 aa14.1□□□□□ -0.15
SLC28A1-202ENST00000338602 VIL1P09327 827 aaKnown RBP14.1□□□□□ -0.15
SLC28A1-202ENST00000338602 EPS15P42566 896 aa14.1□□□□□ -0.15
SLC28A1-202ENST00000338602 CNOT7Q9UIV1 285 aaKnown RBP14.1□□□□□ -0.15
SLC28A1-202ENST00000338602 WTIPA6NIX2 430 aaPredicted RBP14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 SRGAP3O43295 1099 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 LRRC24Q50LG9 513 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 STRIP1Q5VSL9 837 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 RSBN1LQ6PCB5 846 aaPredicted RBP14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 AGBL3Q8NEM8 1001 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 KLHDC4Q8TBB5 520 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 FBXW7Q969H0 707 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 CHMP4BQ9H444 224 aaKnown RBP14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 CIAO1O76071 339 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 PDE8BO95263 885 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 RFX5P48382 616 aaPredicted RBP14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 PTPN12Q05209 780 aaKnown RBP14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 TXNRD3Q86VQ6 643 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 VPS37DQ86XT2 251 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 MICALL2Q8IY33 904 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 CD209Q9NNX6 404 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 KCNQ5Q9NR82 932 aa14.09□□□□□ -0.15
SLC28A1-202ENST00000338602 MYO3BQ8WXR4 1341 aa14.08□□□□□ -0.16
SLC28A1-202ENST00000338602 SNAP23O00161 211 aa14.08□□□□□ -0.16
SLC28A1-202ENST00000338602 IFIT1P09914 478 aaKnown RBP14.08□□□□□ -0.16
SLC28A1-202ENST00000338602 IL15P40933 162 aaPredicted RBP14.08□□□□□ -0.16
SLC28A1-202ENST00000338602 MMP14P50281 582 aa14.08□□□□□ -0.16
SLC28A1-202ENST00000338602 MTX1Q13505 466 aa14.08□□□□□ -0.16
SLC28A1-202ENST00000338602 CAVIN4Q5BKX8 364 aa14.08□□□□□ -0.16
SLC28A1-202ENST00000338602 TTLL5Q6EMB2 1281 aa14.08□□□□□ -0.16
SLC28A1-202ENST00000338602 COPRSQ9NQ92 184 aa14.08□□□□□ -0.16
SLC28A1-202ENST00000338602 CEP126Q9P2H0 1117 aa14.08□□□□□ -0.16
SLC28A1-202ENST00000338602 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
SLC28A1-202ENST00000338602 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
SLC28A1-202ENST00000338602 KLRK1P26718 216 aa14.07□□□□□ -0.16
SLC28A1-202ENST00000338602 HIBADHP31937 336 aaKnown RBP14.07□□□□□ -0.16
SLC28A1-202ENST00000338602 PUM3Q15397 648 aaKnown RBP14.07□□□□□ -0.16
SLC28A1-202ENST00000338602 OGFOD1Q8N543 542 aa14.07□□□□□ -0.16
SLC28A1-202ENST00000338602 ZC3H15Q8WU90 426 aaKnown RBP14.07□□□□□ -0.16
SLC28A1-202ENST00000338602 SIL1Q9H173 461 aa14.07□□□□□ -0.16
SLC28A1-202ENST00000338602 ZBTB7BO15156 539 aaPredicted RBP14.06□□□□□ -0.16
SLC28A1-202ENST00000338602 USP17L8P0C7I0 530 aa14.06□□□□□ -0.16
SLC28A1-202ENST00000338602 RLBP1P12271 317 aa14.06□□□□□ -0.16
SLC28A1-202ENST00000338602 SLC5A1P13866 664 aa14.06□□□□□ -0.16
SLC28A1-202ENST00000338602 IL1R1P14778 569 aa14.06□□□□□ -0.16
SLC28A1-202ENST00000338602 GTF2IP78347 998 aa14.06□□□□□ -0.16
SLC28A1-202ENST00000338602 CNTROBQ8N137 903 aa14.06□□□□□ -0.16
SLC28A1-202ENST00000338602 PANK1Q8TE04 598 aa14.06□□□□□ -0.16
SLC28A1-202ENST00000338602 DDX19BQ9UMR2 479 aa14.06□□□□□ -0.16
SLC28A1-202ENST00000338602 FRAT2O75474 233 aaPredicted RBP14.05□□□□□ -0.16
SLC28A1-202ENST00000338602 G3BP1Q13283 466 aaKnown RBP eCLIP14.05□□□□□ -0.16
SLC28A1-202ENST00000338602 DACT2Q5SW24 774 aa14.05□□□□□ -0.16
SLC28A1-202ENST00000338602 RBM26Q5T8P6 1007 aaKnown RBP14.05□□□□□ -0.16
SLC28A1-202ENST00000338602 VGLL2Q8N8G2 317 aa14.05□□□□□ -0.16
SLC28A1-202ENST00000338602 LPIN2Q92539 896 aa14.05□□□□□ -0.16
SLC28A1-202ENST00000338602 HDAC9Q9UKV0 1011 aa14.05□□□□□ -0.16
SLC28A1-202ENST00000338602 ZNF609O15014 1411 aa14.05□□□□□ -0.16
SLC28A1-202ENST00000338602 IRS2Q9Y4H2 1338 aa14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 SASH1O94885 1247 aa14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 GYG1P46976 350 aa14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 ATP8B2P98198 1209 aa14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 PDE3AQ14432 1141 aa14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 MVPQ14764 893 aaKnown RBP14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 TBC1D10BQ4KMP7 808 aaPredicted RBP14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 MAP1SQ66K74 1059 aaPredicted RBP14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 ATG9AQ7Z3C6 839 aa14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 FAM84BQ96KN1 310 aaPredicted RBP14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 PA2G4Q9UQ80 394 aaKnown RBP14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 AKAP2Q9Y2D5 859 aa14.04□□□□□ -0.16
SLC28A1-202ENST00000338602 ZNF280AP59817 542 aaPredicted RBP14.03□□□□□ -0.16
SLC28A1-202ENST00000338602 FKBP1AP62942 108 aaKnown RBP14.03□□□□□ -0.16
SLC28A1-202ENST00000338602 ATP2B3Q16720 1220 aa14.03□□□□□ -0.16
SLC28A1-202ENST00000338602 SAMD7Q7Z3H4 446 aa14.03□□□□□ -0.16
SLC28A1-202ENST00000338602 TRPM4Q8TD43 1214 aa14.03□□□□□ -0.16
SLC28A1-202ENST00000338602 GMLQ99445 158 aa14.03□□□□□ -0.16
SLC28A1-202ENST00000338602 FGFR2P21802 821 aa14.02□□□□□ -0.17
SLC28A1-202ENST00000338602 OS9Q13438 667 aaPredicted RBP14.02□□□□□ -0.17
SLC28A1-202ENST00000338602 KIF4BQ2VIQ3 1234 aa14.02□□□□□ -0.17
SLC28A1-202ENST00000338602 FBXO33Q7Z6M2 555 aa14.02□□□□□ -0.17
SLC28A1-202ENST00000338602 TDRD7Q8NHU6 1098 aaKnown RBP14.02□□□□□ -0.17
SLC28A1-202ENST00000338602 DCPSQ96C86 337 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms