RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ANTXR1Q9H6X2 564 aa17.87■□□□□ 0.45
CDK5RAP3-201ENST00000338399 HIP1O00291 1037 aa17.86■□□□□ 0.45
CDK5RAP3-201ENST00000338399 REC8O95072 547 aa17.86■□□□□ 0.45
CDK5RAP3-201ENST00000338399 NPR1P16066 1061 aa17.86■□□□□ 0.45
CDK5RAP3-201ENST00000338399 KBTBD3Q8NAB2 608 aa17.86■□□□□ 0.45
CDK5RAP3-201ENST00000338399 ANKIB1Q9P2G1 1089 aa17.86■□□□□ 0.45
CDK5RAP3-201ENST00000338399 USP26Q9BXU7 913 aa17.86■□□□□ 0.45
CDK5RAP3-201ENST00000338399 ZNF804BA4D1E1 1349 aa17.85■□□□□ 0.45
CDK5RAP3-201ENST00000338399 SGSM2O43147 1006 aa17.85■□□□□ 0.45
CDK5RAP3-201ENST00000338399 GYG1P46976 350 aa17.85■□□□□ 0.45
CDK5RAP3-201ENST00000338399 NMIQ13287 307 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-201ENST00000338399 C2CD5Q86YS7 1000 aa17.85■□□□□ 0.45
CDK5RAP3-201ENST00000338399 RUFY2Q8WXA3 655 aa17.85■□□□□ 0.45
CDK5RAP3-201ENST00000338399 MASTLQ96GX5 879 aa17.85■□□□□ 0.45
CDK5RAP3-201ENST00000338399 CACNA1SQ13698 1873 aa17.85■□□□□ 0.45
CDK5RAP3-201ENST00000338399 FAM227BQ96M60 508 aa17.84■□□□□ 0.45
CDK5RAP3-201ENST00000338399 XDHP47989 1333 aa17.84■□□□□ 0.45
CDK5RAP3-201ENST00000338399 PPEF1O14829 653 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-201ENST00000338399 KLRK1P26718 216 aa17.84■□□□□ 0.45
CDK5RAP3-201ENST00000338399 ALDH1B1P30837 517 aa17.84■□□□□ 0.45
CDK5RAP3-201ENST00000338399 GPSM2P81274 684 aa17.84■□□□□ 0.45
CDK5RAP3-201ENST00000338399 CAVIN4Q5BKX8 364 aa17.84■□□□□ 0.45
CDK5RAP3-201ENST00000338399 ZNF622Q969S3 477 aaKnown RBP eCLIP17.84■□□□□ 0.451e-10■■□□□ 12.5
CDK5RAP3-201ENST00000338399 FAM84BQ96KN1 310 aaPredicted RBP17.84■□□□□ 0.45
CDK5RAP3-201ENST00000338399 ANO2Q9NQ90 1003 aa17.84■□□□□ 0.45
CDK5RAP3-201ENST00000338399 HMG20BQ9P0W2 317 aa17.84■□□□□ 0.45
CDK5RAP3-201ENST00000338399 RFX7Q2KHR2 1363 aa17.83■□□□□ 0.45
CDK5RAP3-201ENST00000338399 MYO5AQ9Y4I1 1855 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-201ENST00000338399 H0YIN7 160 aa17.83■□□□□ 0.44
CDK5RAP3-201ENST00000338399 ZBTB7AO95365 584 aa17.83■□□□□ 0.44
CDK5RAP3-201ENST00000338399 CHGBP05060 677 aa17.83■□□□□ 0.44
CDK5RAP3-201ENST00000338399 RBM25P49756 843 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-201ENST00000338399 RASGRF1Q13972 1273 aa17.83■□□□□ 0.44
CDK5RAP3-201ENST00000338399 R3HDM1Q15032 1099 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-201ENST00000338399 NSFL1CQ9UNZ2 370 aaKnown RBP17.83■□□□□ 0.44
CDK5RAP3-201ENST00000338399 LEMD3Q9Y2U8 911 aa17.83■□□□□ 0.44
CDK5RAP3-201ENST00000338399 A0A0D9SFI3 127 aa17.82■□□□□ 0.44
CDK5RAP3-201ENST00000338399 CYP2E1P05181 493 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-201ENST00000338399 TMC4Q7Z404 712 aa17.82■□□□□ 0.44
CDK5RAP3-201ENST00000338399 VPS37DQ86XT2 251 aa17.82■□□□□ 0.44
CDK5RAP3-201ENST00000338399 SPATA5Q8NB90 893 aa17.82■□□□□ 0.44
CDK5RAP3-201ENST00000338399 IQSEC3Q9UPP2 1182 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-201ENST00000338399 LRRC37AA6NMS7 1700 aa17.82■□□□□ 0.44
CDK5RAP3-201ENST00000338399 MYH7P12883 1935 aa17.82■□□□□ 0.44
CDK5RAP3-201ENST00000338399 CHRNA5P30532 468 aa17.82■□□□□ 0.44
CDK5RAP3-201ENST00000338399 SP8Q8IXZ3 490 aa17.82■□□□□ 0.44
CDK5RAP3-201ENST00000338399 GNL3LQ9NVN8 582 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-201ENST00000338399 FBXO33Q7Z6M2 555 aa17.81■□□□□ 0.44
CDK5RAP3-201ENST00000338399 TXNRD3Q86VQ6 643 aa17.81■□□□□ 0.44
CDK5RAP3-201ENST00000338399 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-201ENST00000338399 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
CDK5RAP3-201ENST00000338399 TTF1Q15361 905 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 SLFNL1Q499Z3 407 aa17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 STYK1Q6J9G0 422 aa17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 PIH1D3Q9NQM4 214 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 RAD50Q92878 1312 aa17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 IRS2Q9Y4H2 1338 aa17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 RNF113AO15541 343 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 ATP2B4P23634 1241 aa17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 HIBADHP31937 336 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 KIAA1211Q6ZU35 1233 aa17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 TICAM2Q86XR7 235 aa17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 PODXL2Q9NZ53 605 aa17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 GGA1Q9UJY5 639 aa17.8■□□□□ 0.44
CDK5RAP3-201ENST00000338399 MYH13Q9UKX3 1938 aa17.79■□□□□ 0.44
CDK5RAP3-201ENST00000338399 C10orf71Q711Q0 1435 aa17.79■□□□□ 0.44
CDK5RAP3-201ENST00000338399 UFL1O94874 794 aa17.79■□□□□ 0.44
CDK5RAP3-201ENST00000338399 GPR101Q96P66 508 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-201ENST00000338399 SEC62Q99442 399 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-201ENST00000338399 MTFR1LQ9H019 292 aa17.79■□□□□ 0.44
CDK5RAP3-201ENST00000338399 LSG1Q9H089 658 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-201ENST00000338399 LRRFIP1Q32MZ4 808 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-201ENST00000338399 OLFM4Q6UX06 510 aa17.78■□□□□ 0.44
CDK5RAP3-201ENST00000338399 SLX4Q8IY92 1834 aa17.78■□□□□ 0.44
CDK5RAP3-201ENST00000338399 LTBP1Q14766 1721 aa17.78■□□□□ 0.44
CDK5RAP3-201ENST00000338399 DOCK2Q92608 1830 aa17.78■□□□□ 0.44
CDK5RAP3-201ENST00000338399 PSDA5PKW4 1024 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-201ENST00000338399 IDH1O75874 414 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-201ENST00000338399 MCMDC2Q4G0Z9 681 aa17.78■□□□□ 0.44
CDK5RAP3-201ENST00000338399 ZMYM1Q5SVZ6 1142 aa17.78■□□□□ 0.44
CDK5RAP3-201ENST00000338399 ZNF589Q86UQ0 364 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-201ENST00000338399 POLLQ9UGP5 575 aa17.78■□□□□ 0.44
CDK5RAP3-201ENST00000338399 COL1A1P02452 1464 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-201ENST00000338399 MED23Q9ULK4 1368 aa17.77■□□□□ 0.44
CDK5RAP3-201ENST00000338399 FRAT2O75474 233 aaPredicted RBP17.77■□□□□ 0.43
CDK5RAP3-201ENST00000338399 PTH1RQ03431 593 aa17.77■□□□□ 0.43
CDK5RAP3-201ENST00000338399 TBC1D16Q8TBP0 767 aa17.77■□□□□ 0.43
CDK5RAP3-201ENST00000338399 CNKSR1Q969H4 720 aa17.77■□□□□ 0.43
CDK5RAP3-201ENST00000338399 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.77■□□□□ 0.431e-7■■■□□ 14.8
CDK5RAP3-201ENST00000338399 HELLSQ9NRZ9 838 aa17.77■□□□□ 0.43
CDK5RAP3-201ENST00000338399 DENND2AQ9ULE3 1009 aa17.77■□□□□ 0.43
CDK5RAP3-201ENST00000338399 C6orf229H3BNL8 230 aa17.76■□□□□ 0.43
CDK5RAP3-201ENST00000338399 EPB41L2O43491 1005 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-201ENST00000338399 ZFYP08048 801 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-201ENST00000338399 POLD1P28340 1107 aa17.76■□□□□ 0.43
CDK5RAP3-201ENST00000338399 PRPF40BQ6NWY9 871 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-201ENST00000338399 CCDC129Q6ZRS4 1044 aa17.76■□□□□ 0.43
CDK5RAP3-201ENST00000338399 C15orf52Q6ZUT6 534 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-201ENST00000338399 KIF2CQ99661 725 aa17.76■□□□□ 0.43
CDK5RAP3-201ENST00000338399 TMX4Q9H1E5 349 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms