RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TRMT1Q9NXH9 659 aaKnown RBP6.23□□□□□ -1.41
PTPRB-202ENST00000334414 GRIN2BQ13224 1484 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 GOLGA6BA6NDN3 693 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 PSME1Q06323 249 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 SEPT2Q15019 361 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 TBC1D9Q6ZT07 1266 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 FAM71BQ8TC56 605 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 ODF2LQ9ULJ1 636 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 CETN3O15182 167 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 TRIM37O94972 964 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 PAXIP1Q6ZW49 1069 aaPredicted RBP6.23□□□□□ -1.41
PTPRB-202ENST00000334414 RARSP54136 660 aaKnown RBP6.23□□□□□ -1.41
PTPRB-202ENST00000334414 NFE2L2Q16236 605 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 DRC3Q9H069 523 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 RAB11FIP4Q86YS3 637 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 SMC1BQ8NDV3 1235 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 KRT23Q9C075 422 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.23□□□□□ -1.41
PTPRB-202ENST00000334414 TBCAO75347 108 aaKnown RBP6.23□□□□□ -1.41
PTPRB-202ENST00000334414 MUM1Q2TAK8 710 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 C8orf74Q6P047 294 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 CCHCR1Q8TD31 782 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 CCDC97Q96F63 343 aaPredicted RBP6.23□□□□□ -1.41
PTPRB-202ENST00000334414 NUP58Q9BVL2 599 aa6.23□□□□□ -1.41
PTPRB-202ENST00000334414 DNMBPQ6XZF7 1577 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 RBM26Q5T8P6 1007 aaKnown RBP6.22□□□□□ -1.41
PTPRB-202ENST00000334414 MAIP1Q8WWC4 291 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 DEUP1Q05D60 604 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 NCOA7Q8NI08 942 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 SSH2Q76I76 1423 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 PIK3R4Q99570 1358 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 EIF3DO15371 548 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTPRB-202ENST00000334414 MAP3K12Q12852 859 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 PRPF4BQ13523 1007 aaKnown RBP6.22□□□□□ -1.41
PTPRB-202ENST00000334414 SNCBQ16143 134 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 GKAP1Q5VSY0 366 aaPredicted RBP6.22□□□□□ -1.41
PTPRB-202ENST00000334414 HCLS1P14317 486 aaPredicted RBP6.22□□□□□ -1.41
PTPRB-202ENST00000334414 SNX16P57768 344 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 ZKSCAN8Q15776 578 aaPredicted RBP6.22□□□□□ -1.41
PTPRB-202ENST00000334414 CCDC51Q96ER9 411 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 BAG1Q99933 345 aaPredicted RBP6.22□□□□□ -1.41
PTPRB-202ENST00000334414 ZFYVE9O95405 1425 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 CEP104O60308 925 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 PDE4BQ07343 736 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 RASEFQ8IZ41 740 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 KDM5DQ9BY66 1539 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 TROQ12816 1431 aaPredicted RBP6.22□□□□□ -1.41
PTPRB-202ENST00000334414 PLXNC1O60486 1568 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 LRRD1A4D1F6 860 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 GOLGA8AA7E2F4 631 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 ARHGAP6O43182 974 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 STAT6P42226 847 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 PSMC4P43686 418 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 PDCD2Q16342 344 aaPredicted RBP6.22□□□□□ -1.41
PTPRB-202ENST00000334414 AOX1Q06278 1338 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 TYRO3Q06418 890 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 TMEM57Q8N5G2 664 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 COMMD10Q9Y6G5 202 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 BIVM-ERCC5R4GMW8 1640 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 HMOX1P09601 288 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 SMARCC2Q8TAQ2 1214 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 P3H4Q92791 437 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 NAPBQ9H115 298 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.22□□□□□ -1.41
PTPRB-202ENST00000334414 EFCAB8A8MWE9 144 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 HIP1RO75146 1068 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 METAP2P50579 478 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTPRB-202ENST00000334414 ZNF131P52739 623 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 ZNF445P59923 1031 aa6.22□□□□□ -1.41
PTPRB-202ENST00000334414 ZEB2O60315 1214 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 MGEA5O60502 916 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 CCDC42Q96M95 316 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 C1orf115Q9H7X2 142 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 GAS8O95995 478 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 IDEP14735 1019 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 NOP2P46087 812 aaKnown RBP6.21□□□□□ -1.41
PTPRB-202ENST00000334414 NUTM2DQ5VT03 806 aaPredicted RBP6.21□□□□□ -1.41
PTPRB-202ENST00000334414 GSTA5Q7RTV2 222 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 NUTM2AQ8IVF1 878 aaPredicted RBP6.21□□□□□ -1.41
PTPRB-202ENST00000334414 CDCA7LQ96GN5 454 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 SIL1Q9H173 461 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 AKR1B15C9JRZ8 316 aaPredicted RBP6.21□□□□□ -1.41
PTPRB-202ENST00000334414 CALM1P0DP23 149 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 CALM2P0DP24 149 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 CALM3P0DP25 149 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 IGHMBP2P38935 993 aaKnown RBP6.21□□□□□ -1.41
PTPRB-202ENST00000334414 IARSP41252 1262 aaKnown RBP6.21□□□□□ -1.41
PTPRB-202ENST00000334414 EVCP57679 992 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 PPP1R7Q15435 360 aa6.21□□□□□ -1.41
PTPRB-202ENST00000334414 ADGBQ8N7X0 1667 aa6.21□□□□□ -1.42
PTPRB-202ENST00000334414 CCDC186Q7Z3E2 898 aa6.21□□□□□ -1.42
PTPRB-202ENST00000334414 PODNQ7Z5L7 613 aa6.21□□□□□ -1.42
PTPRB-202ENST00000334414 KIFAP3Q92845 792 aa6.21□□□□□ -1.42
PTPRB-202ENST00000334414 CABS1Q96KC9 395 aa6.21□□□□□ -1.42
PTPRB-202ENST00000334414 RAB17Q9H0T7 212 aa6.21□□□□□ -1.42
PTPRB-202ENST00000334414 TXNDC16Q9P2K2 825 aa6.21□□□□□ -1.42
PTPRB-202ENST00000334414 CNPY4Q8N129 248 aa6.21□□□□□ -1.42
PTPRB-202ENST00000334414 CEP126Q9P2H0 1117 aa6.21□□□□□ -1.42
PTPRB-202ENST00000334414 SSBP05455 408 aaKnown RBP eCLIP6.21□□□□□ -1.42
PTPRB-202ENST00000334414 DRC1Q96MC2 740 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms