RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 C21orf2O43822 256 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 BEND6Q5SZJ8 279 aaPredicted RBP9.69□□□□□ -0.86
SKA2-201ENST00000330137 GORABQ5T7V8 394 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 TXNDC2Q86VQ3 553 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 CTCFLQ8NI51 663 aaPredicted RBP9.69□□□□□ -0.86
SKA2-201ENST00000330137 RBM28Q9NW13 759 aaKnown RBP9.69□□□□□ -0.86
SKA2-201ENST00000330137 TPCN1Q9ULQ1 816 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 SBNO1A3KN83 1393 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 A0A1W2PQ27 194 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 A0A1W2PQ64 194 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 A0A1W2PQD8 194 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 A6NNZ2 444 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 H3BQF6 201 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 KIF3CO14782 793 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 POLA2Q14181 598 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 TUBB8Q3ZCM7 444 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 HSP90B2PQ58FF3 399 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 TMEM132EQ6IEE7 984 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 POTEDQ86YR6 584 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 DNAAF4Q8WXU2 420 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 ZNF396Q96N95 335 aaPredicted RBP9.69□□□□□ -0.86
SKA2-201ENST00000330137 EDC4Q6P2E9 1401 aaKnown RBP9.69□□□□□ -0.86
SKA2-201ENST00000330137 TMC6Q7Z403 805 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 AOPEPQ8N6M6 819 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 L1RE1Q9UN81 338 aa9.69□□□□□ -0.86
SKA2-201ENST00000330137 DDR1Q08345 913 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 KRT32Q14532 448 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 NUTM2DQ5VT03 806 aaPredicted RBP9.68□□□□□ -0.86
SKA2-201ENST00000330137 MAP4K1Q92918 833 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 XPO4Q9C0E2 1151 aaKnown RBP9.68□□□□□ -0.86
SKA2-201ENST00000330137 VPS18Q9P253 973 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 CHMP3Q9Y3E7 222 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 CRB1P82279 1406 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 TMCO5BA8MYB1 307 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 STX10O60499 249 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 MCM3P25205 808 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 AARSP49588 968 aaKnown RBP eCLIP9.68□□□□□ -0.86
SKA2-201ENST00000330137 LARP1Q6PKG0 1096 aaKnown RBP9.68□□□□□ -0.86
SKA2-201ENST00000330137 LRRC31Q6UY01 552 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 SRGAP1Q7Z6B7 1085 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 CCDC34Q96HJ3 373 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 RAI14Q9P0K7 980 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 JCADQ9P266 1359 aa9.68□□□□□ -0.86
SKA2-201ENST00000330137 HMOX1P09601 288 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 SETQ01105 290 aaPredicted RBP9.67□□□□□ -0.86
SKA2-201ENST00000330137 TSHZ3Q63HK5 1081 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 SPATS2Q86XZ4 545 aaKnown RBP9.67□□□□□ -0.86
SKA2-201ENST00000330137 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
SKA2-201ENST00000330137 SUFUQ9UMX1 484 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 ABCC6O95255 1503 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 PNMA6EA0A0J9YXQ4 647 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 VWA3AA6NCI4 1184 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 RPS6KB1P23443 525 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 HSP90AB3PQ58FF7 597 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 BLOC1S2Q6QNY1 142 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 GPATCH11Q8N954 259 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 ZBTB9Q96C00 473 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 IFNKQ9P0W0 207 aa9.67□□□□□ -0.86
SKA2-201ENST00000330137 FAM208AQ9UK61 1670 aaKnown RBP9.67□□□□□ -0.86
SKA2-201ENST00000330137 SHOX2O60902 331 aaPredicted RBP9.66□□□□□ -0.86
SKA2-201ENST00000330137 NLRP12P59046 1061 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 CREB3L3Q68CJ9 461 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 FERMT3Q86UX7 667 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 RHPN1Q8TCX5 695 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 KIFC2Q96AC6 838 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 EVI5LQ96CN4 794 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 GPATCH3Q96I76 525 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 KIAA1468Q9P260 1216 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 PPP2R2CQ9Y2T4 447 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 ERLIN2O94905 339 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 ERCC3P19447 782 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 ADD1P35611 737 aaKnown RBP9.66□□□□□ -0.86
SKA2-201ENST00000330137 ADCK5Q3MIX3 580 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 ADALQ6DHV7 355 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 TTLL5Q6EMB2 1281 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 PRPF40BQ6NWY9 871 aaKnown RBP9.66□□□□□ -0.86
SKA2-201ENST00000330137 STK31Q9BXU1 1019 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 PDE11AQ9HCR9 933 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 BABAM1Q9NWV8 329 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 NPHP4O75161 1426 aaPredicted RBP9.66□□□□□ -0.86
SKA2-201ENST00000330137 ZNF335Q9H4Z2 1342 aaPredicted RBP9.66□□□□□ -0.86
SKA2-201ENST00000330137 MYO5BQ9ULV0 1848 aa9.66□□□□□ -0.86
SKA2-201ENST00000330137 PPP1R12AO14974 1030 aaPredicted RBP9.65□□□□□ -0.86
SKA2-201ENST00000330137 LTKP29376 864 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 HDGFP51858 240 aaKnown RBP9.65□□□□□ -0.86
SKA2-201ENST00000330137 CCDC30Q5VVM6 783 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 CWC27Q6UX04 472 aaKnown RBP9.65□□□□□ -0.86
SKA2-201ENST00000330137 FMR1NBQ8N0W7 255 aaPredicted RBP9.65□□□□□ -0.86
SKA2-201ENST00000330137 SMARCC2Q8TAQ2 1214 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 TOMM22Q9NS69 142 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 AKAP2Q9Y2D5 859 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 TMEM2Q9UHN6 1383 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 H3BQV1 296 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 TDO2P48775 406 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 CHMP4BP1P59074 171 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 GNL2Q13823 731 aaKnown RBP9.65□□□□□ -0.86
SKA2-201ENST00000330137 NBPF20Q3BBV1 942 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 IFFO2Q5TF58 517 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 WDR93Q6P2C0 686 aa9.65□□□□□ -0.86
SKA2-201ENST00000330137 VSTM4Q8IW00 320 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms