RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 ATG9AQ7Z3C6 839 aa20.41■□□□□ 0.86
PTP4A3-201ENST00000329397 NBPF26B4DH59 902 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 NBPF14Q5TI25 921 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 NBPF10Q6P3W6 841 aaKnown RBP20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 NBPF15Q8N660 670 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 SMARCC2Q8TAQ2 1214 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 PUS3Q9BZE2 481 aaKnown RBP20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 GJB4Q9NTQ9 266 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 TPM3P06753 285 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 CABP4P57796 275 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 FOXO4P98177 505 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 E7EWF7 191 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 PFKFB2O60825 505 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 ZNF592Q92610 1267 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 CFAP45Q9UL16 551 aa20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 ZNF330Q9Y3S2 320 aaPredicted RBP20.4■□□□□ 0.86
PTP4A3-201ENST00000329397 HSPD1P10809 573 aaKnown RBP20.39■□□□□ 0.85
PTP4A3-201ENST00000329397 ARFGEF2Q9Y6D5 1785 aa20.39■□□□□ 0.85
PTP4A3-201ENST00000329397 USP27XA6NNY8 438 aa20.39■□□□□ 0.85
PTP4A3-201ENST00000329397 A1BGP04217 495 aa20.39■□□□□ 0.85
PTP4A3-201ENST00000329397 ME1P48163 572 aa20.39■□□□□ 0.85
PTP4A3-201ENST00000329397 FKBP4Q02790 459 aaKnown RBP eCLIP20.39■□□□□ 0.85
PTP4A3-201ENST00000329397 FILIP1Q7Z7B0 1213 aa20.39■□□□□ 0.85
PTP4A3-201ENST00000329397 ILDR1Q86SU0 546 aaPredicted RBP20.39■□□□□ 0.85
PTP4A3-201ENST00000329397 ADAMTS7Q9UKP4 1686 aa20.39■□□□□ 0.85
PTP4A3-201ENST00000329397 CAMTA1Q9Y6Y1 1673 aa20.39■□□□□ 0.85
PTP4A3-201ENST00000329397 MAST3O60307 1309 aa20.38■□□□□ 0.85
PTP4A3-201ENST00000329397 GOLGA6L19H0YKK7 550 aa20.38■□□□□ 0.85
PTP4A3-201ENST00000329397 M0R2C6 588 aa20.38■□□□□ 0.85
PTP4A3-201ENST00000329397 U2AF2P26368 475 aaKnown RBP eCLIP20.38■□□□□ 0.854e-7■□□□□ 10.1
PTP4A3-201ENST00000329397 IQCB1Q15051 598 aa20.38■□□□□ 0.85
PTP4A3-201ENST00000329397 ZSCAN16Q9H4T2 348 aaPredicted RBP20.38■□□□□ 0.85
PTP4A3-201ENST00000329397 TNNT1P13805 278 aa20.38■□□□□ 0.85
PTP4A3-201ENST00000329397 SNW1Q13573 536 aaKnown RBP20.37■□□□□ 0.85
PTP4A3-201ENST00000329397 TRPM3Q9HCF6 1732 aaPredicted RBP20.37■□□□□ 0.85
PTP4A3-201ENST00000329397 SH3TC1Q8TE82 1336 aa20.37■□□□□ 0.85
PTP4A3-201ENST00000329397 PDCL2Q8N4E4 241 aa20.37■□□□□ 0.85
PTP4A3-201ENST00000329397 FSIP1Q8NA03 581 aa20.37■□□□□ 0.85
PTP4A3-201ENST00000329397 PLBD2Q8NHP8 589 aa20.37■□□□□ 0.85
PTP4A3-201ENST00000329397 IFIT1P09914 478 aaKnown RBP20.36■□□□□ 0.85
PTP4A3-201ENST00000329397 DCAF5Q96JK2 942 aa20.36■□□□□ 0.85
PTP4A3-201ENST00000329397 A0A1B0GUL7 405 aa20.36■□□□□ 0.85
PTP4A3-201ENST00000329397 A0A1B0GVL5 298 aa20.36■□□□□ 0.85
PTP4A3-201ENST00000329397 POLR3DP05423 398 aaPredicted RBP20.36■□□□□ 0.85
PTP4A3-201ENST00000329397 PDIA3P30101 505 aaKnown RBP20.36■□□□□ 0.85
PTP4A3-201ENST00000329397 TPD52L1Q16890 204 aaPredicted RBP20.36■□□□□ 0.85
PTP4A3-201ENST00000329397 EXOSC10Q01780 885 aaKnown RBP20.35■□□□□ 0.85
PTP4A3-201ENST00000329397 CCDC73Q6ZRK6 1079 aa20.35■□□□□ 0.85
PTP4A3-201ENST00000329397 PI16Q6UXB8 463 aa20.35■□□□□ 0.85
PTP4A3-201ENST00000329397 OSBP2Q969R2 916 aa20.35■□□□□ 0.85
PTP4A3-201ENST00000329397 RCOR1Q9UKL0 485 aa20.35■□□□□ 0.85
PTP4A3-201ENST00000329397 BECN2A8MW95 431 aa20.34■□□□□ 0.85
PTP4A3-201ENST00000329397 KINO60870 393 aaKnown RBP20.34■□□□□ 0.85
PTP4A3-201ENST00000329397 ADORA1P30542 326 aa20.34■□□□□ 0.85
PTP4A3-201ENST00000329397 ZMYM1Q5SVZ6 1142 aa20.34■□□□□ 0.85
PTP4A3-201ENST00000329397 FDPSP14324 419 aaKnown RBP20.34■□□□□ 0.85
PTP4A3-201ENST00000329397 AOPEPQ8N6M6 819 aa20.34■□□□□ 0.85
PTP4A3-201ENST00000329397 TRMT1Q9NXH9 659 aaKnown RBP20.34■□□□□ 0.85
PTP4A3-201ENST00000329397 C1orf167Q5SNV9 1468 aa20.34■□□□□ 0.85
PTP4A3-201ENST00000329397 ZHX1Q9UKY1 873 aaPredicted RBP20.34■□□□□ 0.85
PTP4A3-201ENST00000329397 MYH15Q9Y2K3 1946 aa20.33■□□□□ 0.85
PTP4A3-201ENST00000329397 STX1AQ16623 288 aa20.33■□□□□ 0.85
PTP4A3-201ENST00000329397 WASHC4Q2M389 1173 aa20.33■□□□□ 0.85
PTP4A3-201ENST00000329397 NAA16Q6N069 864 aaPredicted RBP20.33■□□□□ 0.85
PTP4A3-201ENST00000329397 DHX40Q8IX18 779 aaKnown RBP20.33■□□□□ 0.85
PTP4A3-201ENST00000329397 CARMIL3Q8ND23 1372 aa20.33■□□□□ 0.85
PTP4A3-201ENST00000329397 H7C1W4 665 aa20.33■□□□□ 0.84
PTP4A3-201ENST00000329397 NCBP1Q09161 790 aaKnown RBP20.33■□□□□ 0.84
PTP4A3-201ENST00000329397 CWC25Q9NXE8 425 aaPredicted RBP20.33■□□□□ 0.84
PTP4A3-201ENST00000329397 BIN1O00499 593 aa20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 SCARF1Q14162 830 aa20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 LRRC8AQ8IWT6 810 aa20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 LLPHQ9BRT6 129 aaKnown RBP20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 DSCC1Q9BVC3 393 aa20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 PCDHA7Q9UN72 937 aa20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 V9GYY5 206 aaPredicted RBP20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 PALLDQ8WX93 1383 aa20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 IGSF3O75054 1194 aa20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 HELLSQ9NRZ9 838 aa20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 DENND2AQ9ULE3 1009 aa20.32■□□□□ 0.84
PTP4A3-201ENST00000329397 HMGB1P09429 215 aaKnown RBP20.31■□□□□ 0.84
PTP4A3-201ENST00000329397 ENGASEQ8NFI3 743 aa20.31■□□□□ 0.84
PTP4A3-201ENST00000329397 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
PTP4A3-201ENST00000329397 CLIC4Q9Y696 253 aa20.31■□□□□ 0.84
PTP4A3-201ENST00000329397 SALL1Q9NSC2 1324 aa20.31■□□□□ 0.84
PTP4A3-201ENST00000329397 RNF113AO15541 343 aaKnown RBP20.31■□□□□ 0.84
PTP4A3-201ENST00000329397 ISM2Q6H9L7 571 aa20.31■□□□□ 0.84
PTP4A3-201ENST00000329397 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.31■□□□□ 0.84
PTP4A3-201ENST00000329397 RFX7Q2KHR2 1363 aa20.31■□□□□ 0.84
PTP4A3-201ENST00000329397 EYA2O00167 538 aa20.3■□□□□ 0.84
PTP4A3-201ENST00000329397 FOXP2O15409 715 aa20.3■□□□□ 0.84
PTP4A3-201ENST00000329397 CTIFO43310 598 aaKnown RBP20.3■□□□□ 0.84
PTP4A3-201ENST00000329397 NDUFA8P51970 172 aa20.3■□□□□ 0.84
PTP4A3-201ENST00000329397 FAM160A1Q05DH4 1040 aa20.3■□□□□ 0.84
PTP4A3-201ENST00000329397 SDF4Q9BRK5 362 aa20.3■□□□□ 0.84
PTP4A3-201ENST00000329397 ANKRD7Q92527 254 aa20.3■□□□□ 0.84
PTP4A3-201ENST00000329397 IL15P40933 162 aaPredicted RBP20.29■□□□□ 0.84
PTP4A3-201ENST00000329397 SMAP1Q8IYB5 467 aaPredicted RBP20.29■□□□□ 0.84
PTP4A3-201ENST00000329397 CCDC69A6NI79 296 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms