RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ZMYM1Q5SVZ6 1142 aa16.5■□□□□ 0.23
ATP2C1-201ENST00000328560 CTDNEP1O95476 244 aa16.5■□□□□ 0.23
ATP2C1-201ENST00000328560 BRINP3Q76B58 766 aa16.5■□□□□ 0.23
ATP2C1-201ENST00000328560 USP28Q96RU2 1077 aa16.5■□□□□ 0.23
ATP2C1-201ENST00000328560 GOLGA6L19H0YKK7 550 aa16.5■□□□□ 0.23
ATP2C1-201ENST00000328560 CCDC158Q5M9N0 1113 aa16.5■□□□□ 0.23
ATP2C1-201ENST00000328560 PI16Q6UXB8 463 aa16.5■□□□□ 0.23
ATP2C1-201ENST00000328560 OSBP2Q969R2 916 aa16.5■□□□□ 0.23
ATP2C1-201ENST00000328560 SLAIN2Q9P270 581 aa16.5■□□□□ 0.23
ATP2C1-201ENST00000328560 SH3TC1Q8TE82 1336 aa16.5■□□□□ 0.23
ATP2C1-201ENST00000328560 JCADQ9P266 1359 aa16.49■□□□□ 0.23
ATP2C1-201ENST00000328560 CCDC73Q6ZRK6 1079 aa16.49■□□□□ 0.23
ATP2C1-201ENST00000328560 BCL11BQ9C0K0 894 aaPredicted RBP16.49■□□□□ 0.23
ATP2C1-201ENST00000328560 KIF3AQ9Y496 699 aa16.49■□□□□ 0.23
ATP2C1-201ENST00000328560 CCDC191Q8NCU4 936 aa16.49■□□□□ 0.23
ATP2C1-201ENST00000328560 KIAA1524Q8TCG1 905 aa16.49■□□□□ 0.23
ATP2C1-201ENST00000328560 DSCC1Q9BVC3 393 aa16.49■□□□□ 0.23
ATP2C1-201ENST00000328560 GPTP24298 496 aa16.49■□□□□ 0.23
ATP2C1-201ENST00000328560 TMOD3Q9NYL9 352 aa16.49■□□□□ 0.23
ATP2C1-201ENST00000328560 WDR17Q8IZU2 1322 aa16.48■□□□□ 0.23
ATP2C1-201ENST00000328560 SYNE4Q8N205 404 aa16.48■□□□□ 0.23
ATP2C1-201ENST00000328560 MYRIPQ8NFW9 859 aa16.48■□□□□ 0.23
ATP2C1-201ENST00000328560 POLR3DP05423 398 aaPredicted RBP16.48■□□□□ 0.23
ATP2C1-201ENST00000328560 PDIA3P30101 505 aaKnown RBP16.48■□□□□ 0.23
ATP2C1-201ENST00000328560 HMGN5P82970 282 aaKnown RBP16.48■□□□□ 0.23
ATP2C1-201ENST00000328560 CHAF1AQ13111 956 aaPredicted RBP16.48■□□□□ 0.23
ATP2C1-201ENST00000328560 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
ATP2C1-201ENST00000328560 KINO60870 393 aaKnown RBP16.47■□□□□ 0.23
ATP2C1-201ENST00000328560 SMARCC2Q8TAQ2 1214 aa16.47■□□□□ 0.23
ATP2C1-201ENST00000328560 XAGE2Q96GT9 111 aa16.47■□□□□ 0.23
ATP2C1-201ENST00000328560 BECN2A8MW95 431 aa16.47■□□□□ 0.23
ATP2C1-201ENST00000328560 SF3A1Q15459 793 aaKnown RBP16.47■□□□□ 0.23
ATP2C1-201ENST00000328560 KIF1AQ12756 1690 aa16.47■□□□□ 0.23
ATP2C1-201ENST00000328560 SCARF1Q14162 830 aa16.47■□□□□ 0.23
ATP2C1-201ENST00000328560 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
ATP2C1-201ENST00000328560 LLPHQ9BRT6 129 aaKnown RBP16.47■□□□□ 0.23
ATP2C1-201ENST00000328560 DCCP43146 1447 aa16.46■□□□□ 0.23
ATP2C1-201ENST00000328560 TPM3P06753 285 aa16.46■□□□□ 0.23
ATP2C1-201ENST00000328560 EXOSC10Q01780 885 aaKnown RBP16.46■□□□□ 0.23
ATP2C1-201ENST00000328560 GJB4Q9NTQ9 266 aa16.46■□□□□ 0.23
ATP2C1-201ENST00000328560 ZAP70P43403 619 aa16.46■□□□□ 0.23
ATP2C1-201ENST00000328560 ZNF75DP51815 510 aa16.46■□□□□ 0.23
ATP2C1-201ENST00000328560 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.23
ATP2C1-201ENST00000328560 ZNF396Q96N95 335 aaPredicted RBP16.46■□□□□ 0.23
ATP2C1-201ENST00000328560 GOLPH3LQ9H4A5 285 aa16.46■□□□□ 0.23
ATP2C1-201ENST00000328560 CLIP2Q9UDT6 1046 aa16.46■□□□□ 0.23
ATP2C1-201ENST00000328560 SIPA1L3O60292 1781 aaPredicted RBP16.46■□□□□ 0.23
ATP2C1-201ENST00000328560 C11orf57Q6ZUT1 292 aaPredicted RBP16.46■□□□□ 0.22
ATP2C1-201ENST00000328560 PRIMPOLQ96LW4 560 aa16.46■□□□□ 0.22
ATP2C1-201ENST00000328560 SDF4Q9BRK5 362 aa16.46■□□□□ 0.22
ATP2C1-201ENST00000328560 CPLX1O14810 134 aa16.45■□□□□ 0.22
ATP2C1-201ENST00000328560 APPP05067 770 aa16.45■□□□□ 0.22
ATP2C1-201ENST00000328560 KIF6Q6ZMV9 814 aa16.45■□□□□ 0.22
ATP2C1-201ENST00000328560 C16orf45Q96MC5 204 aaPredicted RBP16.45■□□□□ 0.22
ATP2C1-201ENST00000328560 IMMTQ16891 758 aaKnown RBP16.45■□□□□ 0.22
ATP2C1-201ENST00000328560 NAA16Q6N069 864 aaPredicted RBP16.45■□□□□ 0.22
ATP2C1-201ENST00000328560 SPTLC3Q9NUV7 552 aa16.45■□□□□ 0.22
ATP2C1-201ENST00000328560 TRPM3Q9HCF6 1732 aaPredicted RBP16.45■□□□□ 0.22
ATP2C1-201ENST00000328560 KLF18A0A0U1RQI7 1052 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 ADD1P35611 737 aaKnown RBP16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 RALYLQ86SE5 291 aaKnown RBP16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 GPR108Q9NPR9 543 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 MRC1P22897 1456 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 PALLDQ8WX93 1383 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 GOLGA8BA8MQT2 603 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 FGAP02671 866 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 IFIT5Q13325 482 aaKnown RBP16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 DNAJC10Q8IXB1 793 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 RFX7Q2KHR2 1363 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 SCN11AQ9UI33 1791 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 A0A1B0GVL5 298 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 PRC1O43663 620 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 METTL24Q5JXM2 366 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 MAP7D2Q96T17 732 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 RCOR1Q9UKL0 485 aa16.44■□□□□ 0.22
ATP2C1-201ENST00000328560 FILIP1Q7Z7B0 1213 aa16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 PUS7LQ9H0K6 701 aaKnown RBP16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 TCIRG1Q13488 830 aa16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 STK38Q15208 465 aa16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 C8orf76Q96K31 380 aa16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 ASAP1Q9ULH1 1129 aa16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 ZRSR1Q15695 479 aaKnown RBP16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 TDRD7Q8NHU6 1098 aaKnown RBP16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 CARD10Q9BWT7 1032 aa16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 ORC3Q9UBD5 711 aaPredicted RBP16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 CTNNA3Q9UI47 895 aa16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 AKAP2Q9Y2D5 859 aa16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 CPDO75976 1380 aa16.43■□□□□ 0.22
ATP2C1-201ENST00000328560 STARD3NLO95772 234 aa16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 RXRAP19793 462 aa16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 LRRFIP1Q32MZ4 808 aaKnown RBP16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 LDHAL6AQ6ZMR3 332 aa16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 ZNF592Q92610 1267 aa16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 AFDNP55196 1824 aaKnown RBP16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 RIOK3O14730 519 aaKnown RBP16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 IDH1O75874 414 aaKnown RBP16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 KAT6BQ8WYB5 2073 aa16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 FDPSP14324 419 aaKnown RBP16.42■□□□□ 0.22
ATP2C1-201ENST00000328560 ARID5BQ14865 1188 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms