RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 PI16Q6UXB8 463 aa15.07■□□□□ 0
HMGCS1-201ENST00000325110 NFXL1Q6ZNB6 911 aa15.07■□□□□ 0
HMGCS1-201ENST00000325110 CACTINQ8WUQ7 758 aaKnown RBP15.07■□□□□ 0
HMGCS1-201ENST00000325110 NALCNQ8IZF0 1738 aa15.07■□□□□ 0
HMGCS1-201ENST00000325110 HSPD1P10809 573 aaKnown RBP15.06■□□□□ 0
HMGCS1-201ENST00000325110 MARCKSP29966 332 aaPredicted RBP15.06■□□□□ 0
HMGCS1-201ENST00000325110 SKILP12757 684 aa15.06■□□□□ 0
HMGCS1-201ENST00000325110 IMMTQ16891 758 aaKnown RBP15.06■□□□□ 0
HMGCS1-201ENST00000325110 PLBD2Q8NHP8 589 aa15.06■□□□□ 0
HMGCS1-201ENST00000325110 KCNB2Q92953 911 aa15.06■□□□□ 0
HMGCS1-201ENST00000325110 FAM89AQ96GI7 184 aa15.06■□□□□ 0
HMGCS1-201ENST00000325110 CCDC94Q9BW85 323 aaPredicted RBP15.06■□□□□ 0
HMGCS1-201ENST00000325110 NAA30Q147X3 362 aaPredicted RBP15.06■□□□□ 0
HMGCS1-201ENST00000325110 HSP90AA4PQ58FG1 418 aa15.06■□□□□ 0
HMGCS1-201ENST00000325110 CCDC82Q8N4S0 544 aa15.06■□□□□ 0
HMGCS1-201ENST00000325110 ANO10Q9NW15 660 aa15.06■□□□□ 0
HMGCS1-201ENST00000325110 CCDC144BQ3MJ40 725 aa15.05■□□□□ 0
HMGCS1-201ENST00000325110 IL15P40933 162 aaPredicted RBP15.05■□□□□ -0
HMGCS1-201ENST00000325110 EVA1CP58658 441 aa15.05■□□□□ -0
HMGCS1-201ENST00000325110 RNF113AO15541 343 aaKnown RBP15.05■□□□□ -0
HMGCS1-201ENST00000325110 ADORA1P30542 326 aa15.05■□□□□ -0
HMGCS1-201ENST00000325110 RRP12Q5JTH9 1297 aaKnown RBP15.05■□□□□ -0
HMGCS1-201ENST00000325110 NAT10Q9H0A0 1025 aaKnown RBP15.05■□□□□ -0
HMGCS1-201ENST00000325110 NPHP4O75161 1426 aaPredicted RBP15.05■□□□□ -0
HMGCS1-201ENST00000325110 PRC1O43663 620 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 HOMER1Q86YM7 354 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 GOLPH3LQ9H4A5 285 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 CNNM1Q9NRU3 951 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 COL15A1P39059 1388 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 CCDC69A6NI79 296 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 EYA2O00167 538 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 NRDCO43847 1150 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 PFKFB2O60825 505 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 RFX5P48382 616 aaPredicted RBP15.04■□□□□ -0
HMGCS1-201ENST00000325110 PTPN14Q15678 1187 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 METTL24Q5JXM2 366 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 MICU3Q86XE3 530 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 ZNF710Q8N1W2 664 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 MAST3O60307 1309 aa15.04■□□□□ -0
HMGCS1-201ENST00000325110 MRPS27Q92552 414 aaKnown RBP15.04■□□□□ -0
HMGCS1-201ENST00000325110 SPTLC3Q9NUV7 552 aa15.03■□□□□ -0
HMGCS1-201ENST00000325110 M0R2C6 588 aa15.03■□□□□ -0
HMGCS1-201ENST00000325110 PDIA3P30101 505 aaKnown RBP15.03■□□□□ -0
HMGCS1-201ENST00000325110 TPM4P67936 248 aa15.03■□□□□ -0
HMGCS1-201ENST00000325110 LRRFIP1Q32MZ4 808 aaKnown RBP15.03■□□□□ -0
HMGCS1-201ENST00000325110 CEP135Q66GS9 1140 aa15.03■□□□□ -0
HMGCS1-201ENST00000325110 TMC6Q7Z403 805 aa15.03■□□□□ -0
HMGCS1-201ENST00000325110 FAM177A1Q8N128 213 aaPredicted RBP15.03■□□□□ -0
HMGCS1-201ENST00000325110 C19orf44Q9H6X5 657 aa15.03■□□□□ -0
HMGCS1-201ENST00000325110 ZNF213O14771 459 aa15.03■□□□□ -0
HMGCS1-201ENST00000325110 FAM160A1Q05DH4 1040 aa15.03■□□□□ -0
HMGCS1-201ENST00000325110 OSBP2Q969R2 916 aa15.03■□□□□ -0
HMGCS1-201ENST00000325110 UTYO14607 1347 aa15.02■□□□□ -0
HMGCS1-201ENST00000325110 LMOD1P29536 600 aaPredicted RBP15.02■□□□□ -0
HMGCS1-201ENST00000325110 TDRD7Q8NHU6 1098 aaKnown RBP15.02■□□□□ -0
HMGCS1-201ENST00000325110 CTAGE5O15320 804 aa15.02□□□□□ -0.01
HMGCS1-201ENST00000325110 CTNNA3Q9UI47 895 aa15.02□□□□□ -0.01
HMGCS1-201ENST00000325110 ARHGAP23Q9P227 1491 aa15.02□□□□□ -0.01
HMGCS1-201ENST00000325110 NBPF26B4DH59 902 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 DHX16O60231 1041 aaKnown RBP15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 ZAP70P43403 619 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 PTPN21Q16825 1174 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 NBPF14Q5TI25 921 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 NBPF10Q6P3W6 841 aaKnown RBP15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 NBPF15Q8N660 670 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 HELLSQ9NRZ9 838 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 NCAPD2Q15021 1401 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 ADGRL3Q9HAR2 1447 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 CACNA1FO60840 1977 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 SLC3A2P08195 630 aaKnown RBP15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 IFIT5Q13325 482 aaKnown RBP15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 LDHAL6AQ6ZMR3 332 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 HELBQ8NG08 1087 aaPredicted RBP15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 PCDHA7Q9UN72 937 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 CLIC4Q9Y696 253 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 CTDNEP1O95476 244 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 USPL1Q5W0Q7 1092 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 ZCRB1Q8TBF4 217 aaKnown RBP15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 XAGE2Q96GT9 111 aa15.01□□□□□ -0.01
HMGCS1-201ENST00000325110 CPLX2Q6PUV4 134 aaKnown RBP15□□□□□ -0.01
HMGCS1-201ENST00000325110 MYL10Q9BUA6 226 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 IFNKQ9P0W0 207 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 SLIT1O75093 1534 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 USP27XA6NNY8 438 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 NDUFA8P51970 172 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 TRIM29Q14134 588 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 ZMYM1Q5SVZ6 1142 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 NAA16Q6N069 864 aaPredicted RBP15□□□□□ -0.01
HMGCS1-201ENST00000325110 SYNE4Q8N205 404 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 AIFM3Q96NN9 605 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 SPTLC2O15270 562 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 ATP2B3Q16720 1220 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 KIF6Q6ZMV9 814 aa15□□□□□ -0.01
HMGCS1-201ENST00000325110 LLPHQ9BRT6 129 aaKnown RBP15□□□□□ -0.01
HMGCS1-201ENST00000325110 SERPINC1P01008 464 aa14.99□□□□□ -0.01
HMGCS1-201ENST00000325110 FGAP02671 866 aa14.99□□□□□ -0.01
HMGCS1-201ENST00000325110 ATG9AQ7Z3C6 839 aa14.99□□□□□ -0.01
HMGCS1-201ENST00000325110 DSCC1Q9BVC3 393 aa14.99□□□□□ -0.01
HMGCS1-201ENST00000325110 TSGA10IPQ3SY00 556 aa14.99□□□□□ -0.01
HMGCS1-201ENST00000325110 SLC9C2Q5TAH2 1124 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms