RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 RREB1Q92766 1687 aa25.35■■□□□ 1.65
LIMS2-201ENST00000324938 ANKRD18BA2A2Z9 1011 aa25.34■■□□□ 1.65
LIMS2-201ENST00000324938 IRS4O14654 1257 aaPredicted RBP25.34■■□□□ 1.65
LIMS2-201ENST00000324938 JAK2O60674 1132 aa25.34■■□□□ 1.65
LIMS2-201ENST00000324938 PFKFB2O60825 505 aa25.34■■□□□ 1.65
LIMS2-201ENST00000324938 SCARF1Q14162 830 aa25.34■■□□□ 1.65
LIMS2-201ENST00000324938 METTL24Q5JXM2 366 aa25.34■■□□□ 1.65
LIMS2-201ENST00000324938 FAM184AQ8NB25 1140 aa25.34■■□□□ 1.65
LIMS2-201ENST00000324938 LLPHQ9BRT6 129 aaKnown RBP25.34■■□□□ 1.65
LIMS2-201ENST00000324938 LRRC2Q9BYS8 371 aa25.34■■□□□ 1.65
LIMS2-201ENST00000324938 CICQ96RK0 1608 aaPredicted RBP25.34■■□□□ 1.65
LIMS2-201ENST00000324938 FGD1P98174 961 aa25.34■■□□□ 1.65
LIMS2-201ENST00000324938 LDHAL6AQ6ZMR3 332 aa25.34■■□□□ 1.65
LIMS2-201ENST00000324938 ZSCAN30Q86W11 494 aa25.34■■□□□ 1.65
LIMS2-201ENST00000324938 SCRN1Q12765 414 aa25.33■■□□□ 1.65
LIMS2-201ENST00000324938 TTC6Q86TZ1 520 aa25.33■■□□□ 1.65
LIMS2-201ENST00000324938 SMARCC2Q8TAQ2 1214 aa25.33■■□□□ 1.65
LIMS2-201ENST00000324938 CDCA7Q9BWT1 371 aaPredicted RBP25.33■■□□□ 1.65
LIMS2-201ENST00000324938 TRMT112Q9UI30 125 aaKnown RBP25.33■■□□□ 1.65
LIMS2-201ENST00000324938 MYO5AQ9Y4I1 1855 aaKnown RBP25.33■■□□□ 1.65
LIMS2-201ENST00000324938 ZAP70P43403 619 aa25.33■■□□□ 1.64
LIMS2-201ENST00000324938 DZIP3Q86Y13 1208 aaKnown RBP25.33■■□□□ 1.64
LIMS2-201ENST00000324938 PHLPP1O60346 1717 aa25.32■■□□□ 1.64
LIMS2-201ENST00000324938 A0A0G2JLW4 131 aa25.32■■□□□ 1.64
LIMS2-201ENST00000324938 PDE8AO60658 829 aa25.32■■□□□ 1.64
LIMS2-201ENST00000324938 VGLL2Q8N8G2 317 aa25.32■■□□□ 1.64
LIMS2-201ENST00000324938 SLIT2O94813 1529 aa25.32■■□□□ 1.64
LIMS2-201ENST00000324938 APPBP2Q92624 585 aa25.31■■□□□ 1.64
LIMS2-201ENST00000324938 ZNF512BQ96KM6 892 aaPredicted RBP25.31■■□□□ 1.64
LIMS2-201ENST00000324938 UBN2Q6ZU65 1347 aa25.31■■□□□ 1.64
LIMS2-201ENST00000324938 ZNF34Q8IZ26 560 aa25.31■■□□□ 1.64
LIMS2-201ENST00000324938 SCAND2PQ9GZW5 306 aaPredicted RBP25.31■■□□□ 1.64
LIMS2-201ENST00000324938 CNNM1Q9NRU3 951 aa25.31■■□□□ 1.64
LIMS2-201ENST00000324938 CTNNA3Q9UI47 895 aa25.31■■□□□ 1.64
LIMS2-201ENST00000324938 FOXP2O15409 715 aa25.3■■□□□ 1.64
LIMS2-201ENST00000324938 FAM173BQ6P4H8 233 aa25.3■■□□□ 1.64
LIMS2-201ENST00000324938 WASHC4Q2M389 1173 aa25.3■■□□□ 1.64
LIMS2-201ENST00000324938 UVSSAQ2YD98 709 aa25.3■■□□□ 1.64
LIMS2-201ENST00000324938 TPRNQ4KMQ1 711 aa25.3■■□□□ 1.64
LIMS2-201ENST00000324938 TBC1D2BQ9UPU7 963 aa25.3■■□□□ 1.64
LIMS2-201ENST00000324938 APOBRQ0VD83 1088 aa25.29■■□□□ 1.64
LIMS2-201ENST00000324938 FBXL16Q8N461 479 aa25.29■■□□□ 1.64
LIMS2-201ENST00000324938 LAMB2P55268 1798 aa25.29■■□□□ 1.64
LIMS2-201ENST00000324938 MCAMP43121 646 aa25.28■■□□□ 1.64
LIMS2-201ENST00000324938 RESTQ13127 1097 aa25.28■■□□□ 1.64
LIMS2-201ENST00000324938 TTLL5Q6EMB2 1281 aa25.28■■□□□ 1.64
LIMS2-201ENST00000324938 NSUN7Q8NE18 718 aaKnown RBP25.28■■□□□ 1.64
LIMS2-201ENST00000324938 FUCA2Q9BTY2 467 aa25.28■■□□□ 1.64
LIMS2-201ENST00000324938 SPATA31A1Q5TZJ5 1347 aa25.28■■□□□ 1.64
LIMS2-201ENST00000324938 ATRNO75882 1429 aa25.28■■□□□ 1.64
LIMS2-201ENST00000324938 PI16Q6UXB8 463 aa25.28■■□□□ 1.64
LIMS2-201ENST00000324938 THRAP3Q9Y2W1 955 aaKnown RBP25.28■■□□□ 1.64
LIMS2-201ENST00000324938 HMGN5P82970 282 aaKnown RBP25.27■■□□□ 1.64
LIMS2-201ENST00000324938 AK7Q96M32 723 aa25.27■■□□□ 1.64
LIMS2-201ENST00000324938 PDE8BO95263 885 aa25.27■■□□□ 1.64
LIMS2-201ENST00000324938 EIF5P55010 431 aaKnown RBP25.27■■□□□ 1.64
LIMS2-201ENST00000324938 IMMTQ16891 758 aaKnown RBP25.27■■□□□ 1.64
LIMS2-201ENST00000324938 ZNF274Q96GC6 653 aaPredicted RBP25.27■■□□□ 1.64
LIMS2-201ENST00000324938 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.27■■□□□ 1.64
LIMS2-201ENST00000324938 DDX11Q96FC9 970 aa25.26■■□□□ 1.63
LIMS2-201ENST00000324938 SPATA32Q96LK8 384 aa25.26■■□□□ 1.63
LIMS2-201ENST00000324938 PUS7LQ9H0K6 701 aaKnown RBP25.26■■□□□ 1.63
LIMS2-201ENST00000324938 ZSCAN16Q9H4T2 348 aaPredicted RBP25.26■■□□□ 1.63
LIMS2-201ENST00000324938 DOCK2Q92608 1830 aa25.26■■□□□ 1.63
LIMS2-201ENST00000324938 MYH14Q7Z406 1995 aaKnown RBP25.25■■□□□ 1.63
LIMS2-201ENST00000324938 H3BQV1 296 aa25.25■■□□□ 1.63
LIMS2-201ENST00000324938 CTDNEP1O95476 244 aa25.25■■□□□ 1.63
LIMS2-201ENST00000324938 IFFO2Q5TF58 517 aa25.25■■□□□ 1.63
LIMS2-201ENST00000324938 LEO1Q8WVC0 666 aaPredicted RBP25.25■■□□□ 1.63
LIMS2-201ENST00000324938 DDB1Q16531 1140 aa25.25■■□□□ 1.63
LIMS2-201ENST00000324938 ZSCAN25Q6NSZ9 544 aa25.25■■□□□ 1.63
LIMS2-201ENST00000324938 NOL7Q9UMY1 257 aaKnown RBP25.25■■□□□ 1.63
LIMS2-201ENST00000324938 KIF3AQ9Y496 699 aa25.25■■□□□ 1.63
LIMS2-201ENST00000324938 SALL1Q9NSC2 1324 aa25.25■■□□□ 1.63
LIMS2-201ENST00000324938 PTPDC1A2A3K4 754 aa25.24■■□□□ 1.63
LIMS2-201ENST00000324938 FGAP02671 866 aa25.24■■□□□ 1.63
LIMS2-201ENST00000324938 MSNP26038 577 aaKnown RBP25.24■■□□□ 1.63
LIMS2-201ENST00000324938 EVCP57679 992 aa25.24■■□□□ 1.63
LIMS2-201ENST00000324938 TTF1Q15361 905 aaPredicted RBP25.24■■□□□ 1.63
LIMS2-201ENST00000324938 NAA16Q6N069 864 aaPredicted RBP25.24■■□□□ 1.63
LIMS2-201ENST00000324938 INTS5Q6P9B9 1019 aaKnown RBP25.24■■□□□ 1.63
LIMS2-201ENST00000324938 GIMAP6Q6P9H5 292 aa25.24■■□□□ 1.63
LIMS2-201ENST00000324938 CHMP4CQ96CF2 233 aa25.24■■□□□ 1.63
LIMS2-201ENST00000324938 CCDC87Q9NVE4 849 aa25.24■■□□□ 1.63
LIMS2-201ENST00000324938 GPAA1O43292 621 aa25.24■■□□□ 1.63
LIMS2-201ENST00000324938 HCLS1P14317 486 aaPredicted RBP25.24■■□□□ 1.63
LIMS2-201ENST00000324938 ARID4AP29374 1257 aaPredicted RBP25.23■■□□□ 1.63
LIMS2-201ENST00000324938 PDIA3P30101 505 aaKnown RBP25.23■■□□□ 1.63
LIMS2-201ENST00000324938 ADD2P35612 726 aa25.23■■□□□ 1.63
LIMS2-201ENST00000324938 TFIP11Q9UBB9 837 aaKnown RBP25.23■■□□□ 1.63
LIMS2-201ENST00000324938 CCDC39Q9UFE4 941 aa25.23■■□□□ 1.63
LIMS2-201ENST00000324938 MROH5Q6ZUA9 1318 aa25.22■■□□□ 1.63
LIMS2-201ENST00000324938 LTBP4Q8N2S1 1624 aa25.21■■□□□ 1.63
LIMS2-201ENST00000324938 LIG1P18858 919 aa25.21■■□□□ 1.63
LIMS2-201ENST00000324938 CCT2P78371 535 aaKnown RBP25.21■■□□□ 1.63
LIMS2-201ENST00000324938 PUM3Q15397 648 aaKnown RBP25.21■■□□□ 1.63
LIMS2-201ENST00000324938 CHST3Q7LGC8 479 aa25.21■■□□□ 1.63
LIMS2-201ENST00000324938 COL5A3P25940 1745 aaPredicted RBP25.21■■□□□ 1.63
LIMS2-201ENST00000324938 BCORQ6W2J9 1755 aa25.21■■□□□ 1.63
LIMS2-201ENST00000324938 UQCRFS1P1P0C7P4 283 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms