RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 KCNK9Q9NPC2 374 aa16.53■□□□□ 0.24
NUP98-201ENST00000324932 FEZ2Q9UHY8 353 aaPredicted RBP16.53■□□□□ 0.24
NUP98-201ENST00000324932 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
NUP98-201ENST00000324932 U2AF2P26368 475 aaKnown RBP eCLIP16.53■□□□□ 0.244e-7■■■■□ 20
NUP98-201ENST00000324932 ATP5DP30049 168 aa16.53■□□□□ 0.24
NUP98-201ENST00000324932 MIPOL1Q8TD10 442 aa16.53■□□□□ 0.24
NUP98-201ENST00000324932 PSMD1Q99460 953 aa16.53■□□□□ 0.24
NUP98-201ENST00000324932 CIB2O75838 187 aa16.53■□□□□ 0.24
NUP98-201ENST00000324932 MTUS1Q9ULD2 1270 aa16.53■□□□□ 0.24
NUP98-201ENST00000324932 ZC3H6P61129 1189 aaKnown RBP16.53■□□□□ 0.24
NUP98-201ENST00000324932 ATP11AP98196 1134 aa16.53■□□□□ 0.24
NUP98-201ENST00000324932 FMNL3Q8IVF7 1028 aa16.53■□□□□ 0.24
NUP98-201ENST00000324932 MRVI1Q9Y6F6 885 aa16.53■□□□□ 0.24
NUP98-201ENST00000324932 ZPR1O75312 459 aa16.52■□□□□ 0.24
NUP98-201ENST00000324932 UBXN1Q04323 297 aa16.52■□□□□ 0.24
NUP98-201ENST00000324932 DHX58Q96C10 678 aa16.52■□□□□ 0.24
NUP98-201ENST00000324932 MKRN1Q9UHC7 482 aaKnown RBP16.52■□□□□ 0.24
NUP98-201ENST00000324932 PLCB3Q01970 1234 aa16.52■□□□□ 0.24
NUP98-201ENST00000324932 CCDC50Q8IVM0 306 aa16.52■□□□□ 0.24
NUP98-201ENST00000324932 CRNKL1Q9BZJ0 848 aaKnown RBP16.52■□□□□ 0.24
NUP98-201ENST00000324932 CABP5Q9NP86 173 aa16.52■□□□□ 0.24
NUP98-201ENST00000324932 NDUFAB1O14561 156 aa16.52■□□□□ 0.24
NUP98-201ENST00000324932 RPUSD2Q8IZ73 545 aaKnown RBP16.52■□□□□ 0.24
NUP98-201ENST00000324932 RGS22Q8NE09 1264 aa16.52■□□□□ 0.24
NUP98-201ENST00000324932 CDC5LQ99459 802 aaKnown RBP16.52■□□□□ 0.23
NUP98-201ENST00000324932 CWC25Q9NXE8 425 aaPredicted RBP16.52■□□□□ 0.23
NUP98-201ENST00000324932 ATP6V0A2Q9Y487 856 aa16.52■□□□□ 0.23
NUP98-201ENST00000324932 INPP5BP32019 993 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 EMILIN1Q9Y6C2 1016 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 KIF3CO14782 793 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 ARL1P40616 181 aaPredicted RBP16.51■□□□□ 0.23
NUP98-201ENST00000324932 ATL3Q6DD88 541 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 Q6ZUG5 572 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 MBIPQ9NS73 344 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 SMIM23A6NLE4 172 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 ANKRD44Q8N8A2 993 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 BAG1Q99933 345 aaPredicted RBP16.51■□□□□ 0.23
NUP98-201ENST00000324932 TROQ12816 1431 aaPredicted RBP16.51■□□□□ 0.23
NUP98-201ENST00000324932 CHMP4BP1P59074 171 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 BRAPQ7Z569 592 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 PPP1R9BQ96SB3 815 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 MCMDC2Q4G0Z9 681 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 CCDC26Q8TAB7 109 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
NUP98-201ENST00000324932 IMPG2Q9BZV3 1241 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 SWAP70Q9UH65 585 aa16.51■□□□□ 0.23
NUP98-201ENST00000324932 MYL5Q02045 173 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 C8orf34Q49A92 452 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 ZWINTO95229 277 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 EEF2P13639 858 aaKnown RBP16.5■□□□□ 0.23
NUP98-201ENST00000324932 NUTM2AQ8IVF1 878 aaPredicted RBP16.5■□□□□ 0.23
NUP98-201ENST00000324932 TXNDC16Q9P2K2 825 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 PCK1P35558 622 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 CCDC122Q5T0U0 273 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 TTC21BQ7Z4L5 1316 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 TERF1P54274 439 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 WDHD1O75717 1129 aaPredicted RBP16.5■□□□□ 0.23
NUP98-201ENST00000324932 PI4KAP2A4QPH2 592 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 AKR1B15C9JRZ8 316 aaPredicted RBP16.5■□□□□ 0.23
NUP98-201ENST00000324932 NEDD9Q14511 834 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 PPP1R7Q15435 360 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 PI4KAP1Q8N8J0 262 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 VCX3BQ9H321 246 aa16.5■□□□□ 0.23
NUP98-201ENST00000324932 ARHGAP25P42331 645 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 IFIT1BQ5T764 474 aaKnown RBP16.49■□□□□ 0.23
NUP98-201ENST00000324932 NME9Q86XW9 330 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 CALML3P27482 149 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 ARID5AQ03989 594 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 CFAP157Q5JU67 520 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 MPRIPQ6WCQ1 1025 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 CEP128Q6ZU80 1094 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 TEX13AQ9BXU3 409 aaPredicted RBP16.49■□□□□ 0.23
NUP98-201ENST00000324932 LRRC2Q9BYS8 371 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 CLNS1AP54105 237 aaKnown RBP16.49■□□□□ 0.23
NUP98-201ENST00000324932 CCDC141Q6ZP82 1450 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 SARNPP82979 210 aaKnown RBP16.49■□□□□ 0.23
NUP98-201ENST00000324932 UBE3BQ7Z3V4 1068 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 UBLCP1Q8WVY7 318 aaPredicted RBP16.49■□□□□ 0.23
NUP98-201ENST00000324932 STX8Q9UNK0 236 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 EFCAB5A4FU69 1503 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 CROCCP2Q86T23 111 aa16.49■□□□□ 0.23
NUP98-201ENST00000324932 VIMP08670 466 aaKnown RBP16.48■□□□□ 0.23
NUP98-201ENST00000324932 KRT79Q5XKE5 535 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 TRMT1LQ7Z2T5 733 aaKnown RBP16.48■□□□□ 0.23
NUP98-201ENST00000324932 TTF2Q9UNY4 1162 aaKnown RBP16.48■□□□□ 0.23
NUP98-201ENST00000324932 PCDHB15Q9Y5E8 787 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 PPM1FP49593 454 aaPredicted RBP16.48■□□□□ 0.23
NUP98-201ENST00000324932 CCDC25Q86WR0 208 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 ANKLE2Q86XL3 938 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 TRIM14Q14142 442 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 TSNAXIP1Q2TAA8 658 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.48■□□□□ 0.23
NUP98-201ENST00000324932 NAPGQ99747 312 aaPredicted RBP16.48■□□□□ 0.23
NUP98-201ENST00000324932 CALM1P0DP23 149 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 CALM2P0DP24 149 aa16.48■□□□□ 0.23
NUP98-201ENST00000324932 CALM3P0DP25 149 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms