RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 SIRT2Q8IXJ6 389 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 NGLY1Q96IV0 654 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 CEP89Q96ST8 783 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 NBPF3Q9H094 633 aa12.01□□□□□ -0.49
SF3B2-201ENST00000322535 ABCC4O15439 1325 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 SEC31AO94979 1220 aaKnown RBP12□□□□□ -0.49
SF3B2-201ENST00000322535 TPM4P67936 248 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 ARID5BQ14865 1188 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 ARMC3Q5W041 872 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 MMS22LQ6ZRQ5 1243 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 TTC5Q8N0Z6 440 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 LRRN4CLQ8ND94 238 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 CRYBG1Q9Y4K1 1723 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 NEBLO76041 1014 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 LIG1P18858 919 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 CACTINQ8WUQ7 758 aaKnown RBP12□□□□□ -0.49
SF3B2-201ENST00000322535 THOC1Q96FV9 657 aaKnown RBP12□□□□□ -0.49
SF3B2-201ENST00000322535 ERO1AQ96HE7 468 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 DCAF5Q96JK2 942 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 ANKRD33BA6NCL7 494 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 EIF3CLB5ME19 914 aaKnown RBP12□□□□□ -0.49
SF3B2-201ENST00000322535 IPO7O95373 1038 aaKnown RBP12□□□□□ -0.49
SF3B2-201ENST00000322535 SLU7O95391 586 aaKnown RBP12□□□□□ -0.49
SF3B2-201ENST00000322535 PAX7P23759 505 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 ARHGAP29Q52LW3 1261 aa12□□□□□ -0.49
SF3B2-201ENST00000322535 EIF3CQ99613 913 aaKnown RBP12□□□□□ -0.49
SF3B2-201ENST00000322535 NUCKS1Q9H1E3 243 aaKnown RBP12□□□□□ -0.49
SF3B2-201ENST00000322535 COQ9O75208 318 aa11.99□□□□□ -0.49
SF3B2-201ENST00000322535 TMTC2Q8N394 836 aa11.99□□□□□ -0.49
SF3B2-201ENST00000322535 ASAP1Q9ULH1 1129 aa11.99□□□□□ -0.49
SF3B2-201ENST00000322535 NHSL1Q5SYE7 1610 aa11.99□□□□□ -0.49
SF3B2-201ENST00000322535 CWC27Q6UX04 472 aaKnown RBP11.99□□□□□ -0.49
SF3B2-201ENST00000322535 RGS12O14924 1447 aa11.99□□□□□ -0.49
SF3B2-201ENST00000322535 FAM208AQ9UK61 1670 aaKnown RBP11.98□□□□□ -0.49
SF3B2-201ENST00000322535 CTAGE5O15320 804 aa11.98□□□□□ -0.49
SF3B2-201ENST00000322535 OAS2P29728 719 aaKnown RBP11.98□□□□□ -0.49
SF3B2-201ENST00000322535 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
SF3B2-201ENST00000322535 CWF19L2Q2TBE0 894 aaKnown RBP11.98□□□□□ -0.49
SF3B2-201ENST00000322535 ARHGAP45Q92619 1136 aa11.98□□□□□ -0.49
SF3B2-201ENST00000322535 TATDN2Q93075 761 aa11.98□□□□□ -0.49
SF3B2-201ENST00000322535 LARP6Q9BRS8 491 aaKnown RBP11.98□□□□□ -0.49
SF3B2-201ENST00000322535 INTS3Q68E01 1043 aaKnown RBP11.98□□□□□ -0.49
SF3B2-201ENST00000322535 FOXR1Q6PIV2 292 aa11.98□□□□□ -0.49
SF3B2-201ENST00000322535 TMCO3Q6UWJ1 677 aa11.98□□□□□ -0.49
SF3B2-201ENST00000322535 CKAP2LQ8IYA6 745 aa11.98□□□□□ -0.49
SF3B2-201ENST00000322535 FAM210AQ96ND0 272 aa11.98□□□□□ -0.49
SF3B2-201ENST00000322535 UPF3BQ9BZI7 483 aaKnown RBP11.98□□□□□ -0.49
SF3B2-201ENST00000322535 ECM2O94769 699 aaPredicted RBP11.97□□□□□ -0.49
SF3B2-201ENST00000322535 FAM163BP0C2L3 166 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 HSPA1LP34931 641 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 KCNQ4P56696 695 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 GOLGA5Q8TBA6 731 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 OTUD7AQ8TE49 926 aaPredicted RBP11.97□□□□□ -0.49
SF3B2-201ENST00000322535 SRCIN1Q9C0H9 1055 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 CLIP2Q9UDT6 1046 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 NCAPD2Q15021 1401 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 PCDH11XQ9BZA7 1347 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 PCDH11YQ9BZA8 1340 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 A1BGP04217 495 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 MIEF2Q96C03 454 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 ECEL1O95672 775 aa11.97□□□□□ -0.49
SF3B2-201ENST00000322535 PHLPP1O60346 1717 aa11.96□□□□□ -0.49
SF3B2-201ENST00000322535 EXOC5O00471 708 aa11.96□□□□□ -0.49
SF3B2-201ENST00000322535 CCDC192P0DO97 292 aa11.96□□□□□ -0.49
SF3B2-201ENST00000322535 SF3A1Q15459 793 aaKnown RBP11.96□□□□□ -0.49
SF3B2-201ENST00000322535 CCDC144BQ3MJ40 725 aa11.96□□□□□ -0.49
SF3B2-201ENST00000322535 FILIP1Q7Z7B0 1213 aa11.96□□□□□ -0.49
SF3B2-201ENST00000322535 REXO1L1PQ8IX06 675 aa11.96□□□□□ -0.49
SF3B2-201ENST00000322535 CCDC144CPQ8IYA2 1237 aa11.96□□□□□ -0.49
SF3B2-201ENST00000322535 CERKQ8TCT0 537 aa11.96□□□□□ -0.49
SF3B2-201ENST00000322535 SRRTQ9BXP5 876 aaKnown RBP11.96□□□□□ -0.49
SF3B2-201ENST00000322535 MAP3K2Q9Y2U5 619 aa11.96□□□□□ -0.49
SF3B2-201ENST00000322535 OVOS2A0A0G2JMS6 1433 aa11.96□□□□□ -0.5
SF3B2-201ENST00000322535 UTRNP46939 3433 aa11.96□□□□□ -0.5
SF3B2-201ENST00000322535 NBPF7P0C2Y1 421 aaPredicted RBP11.96□□□□□ -0.5
SF3B2-201ENST00000322535 POLD1P28340 1107 aa11.96□□□□□ -0.5
SF3B2-201ENST00000322535 PAIP2Q9BPZ3 127 aaKnown RBP11.96□□□□□ -0.5
SF3B2-201ENST00000322535 EPC1Q9H2F5 836 aa11.96□□□□□ -0.5
SF3B2-201ENST00000322535 ABCA3Q99758 1704 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 PPM1EQ8WY54 764 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 PIGBQ92521 554 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 ETAA1Q9NY74 926 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.95□□□□□ -0.53e-8■■■□□ 14.7
SF3B2-201ENST00000322535 ATP5J2-PTCD1G3V325 749 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 SMC2O95347 1197 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 MNAT1P51948 309 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 TBC1D8BQ0IIM8 1120 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 JAKMIP3Q5VZ66 844 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 XAGE3Q8WTP9 111 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 GCC1Q96CN9 775 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 TMOD3Q9NYL9 352 aa11.95□□□□□ -0.5
SF3B2-201ENST00000322535 SKILP12757 684 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 PDIA6Q15084 440 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 PTF1AQ7RTS3 328 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 PLEKHM2Q8IWE5 1019 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 AK7Q96M32 723 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 PLEKHA4Q9H4M7 779 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 PDRG1Q9NUG6 133 aa11.94□□□□□ -0.5
SF3B2-201ENST00000322535 DBF4Q9UBU7 674 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms