RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 IL15P40933 162 aaPredicted RBP17.63■□□□□ 0.41
VARS2-201ENST00000321897 LSG1Q9H089 658 aaKnown RBP17.63■□□□□ 0.41
VARS2-201ENST00000321897 DBNLQ9UJU6 430 aaKnown RBP17.63■□□□□ 0.41
VARS2-201ENST00000321897 PHACTR2O75167 634 aa17.63■□□□□ 0.41
VARS2-201ENST00000321897 SIRT1Q96EB6 747 aa17.63■□□□□ 0.41
VARS2-201ENST00000321897 ALG1Q9BT22 464 aa17.63■□□□□ 0.41
VARS2-201ENST00000321897 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
VARS2-201ENST00000321897 MAP3K12Q12852 859 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 TTC6Q86TZ1 520 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 CNNM3Q8NE01 707 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 NCOA7Q8NI08 942 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 ZNF215Q9UL58 517 aaPredicted RBP17.62■□□□□ 0.41
VARS2-201ENST00000321897 ZSCAN25Q6NSZ9 544 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 DHX32Q7L7V1 743 aaKnown RBP17.62■□□□□ 0.41
VARS2-201ENST00000321897 AMOTL1Q8IY63 956 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 TMX4Q9H1E5 349 aaPredicted RBP17.62■□□□□ 0.41
VARS2-201ENST00000321897 NPHP3Q7Z494 1330 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 PHKBQ93100 1093 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 MTMR6Q9Y217 621 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 B4E1Z4 1266 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 PRDM1O75626 825 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 HMGB1P09429 215 aaKnown RBP17.62■□□□□ 0.41
VARS2-201ENST00000321897 NAP1L1P55209 391 aaKnown RBP17.62■□□□□ 0.41
VARS2-201ENST00000321897 CMTR1Q8N1G2 835 aaKnown RBP17.62■□□□□ 0.41
VARS2-201ENST00000321897 CAGE1Q8TC20 777 aa17.62■□□□□ 0.41
VARS2-201ENST00000321897 HECW2Q9P2P5 1572 aa17.61■□□□□ 0.41
VARS2-201ENST00000321897 SASH1O94885 1247 aa17.61■□□□□ 0.41
VARS2-201ENST00000321897 PTPN21Q16825 1174 aa17.61■□□□□ 0.41
VARS2-201ENST00000321897 TSPYL1Q9H0U9 437 aa17.61■□□□□ 0.41
VARS2-201ENST00000321897 BRMS1Q9HCU9 246 aa17.61■□□□□ 0.41
VARS2-201ENST00000321897 SNAP23O00161 211 aa17.61■□□□□ 0.41
VARS2-201ENST00000321897 AFMP43652 599 aa17.61■□□□□ 0.41
VARS2-201ENST00000321897 GNG11P61952 73 aa17.61■□□□□ 0.41
VARS2-201ENST00000321897 CBX8Q9HC52 389 aa17.61■□□□□ 0.41
VARS2-201ENST00000321897 ZAP70P43403 619 aa17.6■□□□□ 0.41
VARS2-201ENST00000321897 IKQ13123 557 aaPredicted RBP17.6■□□□□ 0.41
VARS2-201ENST00000321897 GPHNQ9NQX3 736 aaPredicted RBP17.6■□□□□ 0.41
VARS2-201ENST00000321897 PPRC1Q5VV67 1664 aaKnown RBP17.6■□□□□ 0.41
VARS2-201ENST00000321897 ZHX3Q9H4I2 956 aa17.6■□□□□ 0.41
VARS2-201ENST00000321897 BTG4Q9NY30 223 aa17.6■□□□□ 0.41
VARS2-201ENST00000321897 SHROOM2Q13796 1616 aa17.6■□□□□ 0.41
VARS2-201ENST00000321897 PNPLA6Q8IY17 1366 aa17.6■□□□□ 0.41
VARS2-201ENST00000321897 A2ML1A8K2U0 1454 aa17.6■□□□□ 0.41
VARS2-201ENST00000321897 IRS4O14654 1257 aaPredicted RBP17.6■□□□□ 0.41
VARS2-201ENST00000321897 SSBP05455 408 aaKnown RBP eCLIP17.6■□□□□ 0.41
VARS2-201ENST00000321897 PI4K2BQ8TCG2 481 aa17.6■□□□□ 0.41
VARS2-201ENST00000321897 RNF113AO15541 343 aaKnown RBP17.59■□□□□ 0.41
VARS2-201ENST00000321897 IPO7O95373 1038 aaKnown RBP17.59■□□□□ 0.41
VARS2-201ENST00000321897 IL2RBP14784 551 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 KCNQ4P56696 695 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 MEX3CQ5U5Q3 659 aaKnown RBP17.59■□□□□ 0.41
VARS2-201ENST00000321897 VAT1LQ9HCJ6 419 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 GNL3LQ9NVN8 582 aaKnown RBP17.59■□□□□ 0.41
VARS2-201ENST00000321897 EYA2O00167 538 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 NR1I2O75469 434 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 CCDC191Q8NCU4 936 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 ANKRD20A12PQ8NF67 263 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 LEO1Q8WVC0 666 aaPredicted RBP17.59■□□□□ 0.41
VARS2-201ENST00000321897 ACBD3Q9H3P7 528 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 DEF6Q9H4E7 631 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 PTCH1Q13635 1447 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 XAGE2Q96GT9 111 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 RUFY1Q96T51 708 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 GJB4Q9NTQ9 266 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 QRICH2Q9H0J4 1663 aa17.59■□□□□ 0.41
VARS2-201ENST00000321897 CDKL5O76039 1030 aa17.58■□□□□ 0.41
VARS2-201ENST00000321897 USP5P45974 858 aa17.58■□□□□ 0.41
VARS2-201ENST00000321897 MAGEB6Q8N7X4 407 aa17.58■□□□□ 0.41
VARS2-201ENST00000321897 ZNF219Q9P2Y4 722 aaPredicted RBP17.58■□□□□ 0.41
VARS2-201ENST00000321897 KIF2AO00139 706 aaPredicted RBP17.58■□□□□ 0.4
VARS2-201ENST00000321897 STX1AQ16623 288 aa17.58■□□□□ 0.4
VARS2-201ENST00000321897 PHKG2P15735 406 aa17.58■□□□□ 0.4
VARS2-201ENST00000321897 ARHGEF25Q86VW2 580 aa17.58■□□□□ 0.4
VARS2-201ENST00000321897 OSBPL3Q9H4L5 887 aa17.58■□□□□ 0.4
VARS2-201ENST00000321897 ATP7BP35670 1465 aa17.58■□□□□ 0.4
VARS2-201ENST00000321897 ZBTB43O43298 467 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 TOP1P11387 765 aaKnown RBP17.57■□□□□ 0.4
VARS2-201ENST00000321897 ADORA1P30542 326 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 SYNE4Q8N205 404 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 SRRTQ9BXP5 876 aaKnown RBP17.57■□□□□ 0.4
VARS2-201ENST00000321897 STX17P56962 302 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 ERCC6LQ2NKX8 1250 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 DZIP3Q86Y13 1208 aaKnown RBP17.57■□□□□ 0.4
VARS2-201ENST00000321897 NEK11Q8NG66 645 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 PDLIM2Q96JY6 352 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 NIP7Q9Y221 180 aaKnown RBP eCLIP17.57■□□□□ 0.4
VARS2-201ENST00000321897 CCP110O43303 1012 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 SYKP43405 635 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 MFSD6Q6ZSS7 791 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 STAP2Q9UGK3 403 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 SLC4A4Q9Y6R1 1079 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 SLC5A1P13866 664 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 CYP7A1P22680 504 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 ITGA6P23229 1130 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 ATP6V1AP38606 617 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 KIF4BQ2VIQ3 1234 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 KBTBD3Q8NAB2 608 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 CENPHQ9H3R5 247 aa17.57■□□□□ 0.4
VARS2-201ENST00000321897 PLBD2Q8NHP8 589 aa17.56■□□□□ 0.4
VARS2-201ENST00000321897 MRPS27Q92552 414 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms