RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 CHST3Q7LGC8 479 aa19.2■□□□□ 0.66
PDE1C-201ENST00000321453 PDE11AQ9HCR9 933 aa19.2■□□□□ 0.66
PDE1C-201ENST00000321453 GNAT3A8MTJ3 354 aa19.2■□□□□ 0.66
PDE1C-201ENST00000321453 N4BP1O75113 896 aaKnown RBP19.2■□□□□ 0.66
PDE1C-201ENST00000321453 SERPINC1P01008 464 aa19.2■□□□□ 0.66
PDE1C-201ENST00000321453 POLR3DP05423 398 aaPredicted RBP19.2■□□□□ 0.66
PDE1C-201ENST00000321453 KARSQ15046 597 aaKnown RBP19.2■□□□□ 0.66
PDE1C-201ENST00000321453 FMR1NBQ8N0W7 255 aaPredicted RBP19.2■□□□□ 0.66
PDE1C-201ENST00000321453 DRC1Q96MC2 740 aa19.2■□□□□ 0.66
PDE1C-201ENST00000321453 KIAA1468Q9P260 1216 aa19.2■□□□□ 0.66
PDE1C-201ENST00000321453 PHACTR2O75167 634 aa19.19■□□□□ 0.66
PDE1C-201ENST00000321453 CWF19L2Q2TBE0 894 aaKnown RBP19.19■□□□□ 0.66
PDE1C-201ENST00000321453 PDILTQ8N807 584 aa19.19■□□□□ 0.66
PDE1C-201ENST00000321453 SUGCTQ9HAC7 445 aa19.19■□□□□ 0.66
PDE1C-201ENST00000321453 TMEM131LA2VDJ0 1609 aa19.19■□□□□ 0.66
PDE1C-201ENST00000321453 VWA3AA6NCI4 1184 aa19.19■□□□□ 0.66
PDE1C-201ENST00000321453 AMPHP49418 695 aa19.19■□□□□ 0.66
PDE1C-201ENST00000321453 LONRF2Q1L5Z9 754 aa19.19■□□□□ 0.66
PDE1C-201ENST00000321453 PEAK1Q9H792 1746 aa19.19■□□□□ 0.66
PDE1C-201ENST00000321453 LEKR1Q6ZMV7 388 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 ILDR1Q86SU0 546 aaPredicted RBP19.18■□□□□ 0.66
PDE1C-201ENST00000321453 NSUN7Q8NE18 718 aaKnown RBP19.18■□□□□ 0.66
PDE1C-201ENST00000321453 CTDNEP1O95476 244 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 ACTN2P35609 894 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 PACS2Q86VP3 889 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 USHBP1Q8N6Y0 703 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 DHX58Q96C10 678 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 DESI2Q9BSY9 194 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 NRKQ7Z2Y5 1582 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 DLC1Q96QB1 1528 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 SASH1O94885 1247 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 UBASH3AP57075 661 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 NCAPHQ15003 741 aa19.18■□□□□ 0.66
PDE1C-201ENST00000321453 SART3Q15020 963 aaKnown RBP19.18■□□□□ 0.66
PDE1C-201ENST00000321453 IRX2Q9BZI1 471 aaPredicted RBP19.18■□□□□ 0.66
PDE1C-201ENST00000321453 PUF60Q9UHX1 559 aaKnown RBP19.18■□□□□ 0.66
PDE1C-201ENST00000321453 CHD2O14647 1828 aaKnown RBP19.18■□□□□ 0.66
PDE1C-201ENST00000321453 ACEP12821 1306 aa19.17■□□□□ 0.66
PDE1C-201ENST00000321453 TAF5LO75529 589 aa19.17■□□□□ 0.66
PDE1C-201ENST00000321453 ERC1Q8IUD2 1116 aa19.17■□□□□ 0.66
PDE1C-201ENST00000321453 ZNF396Q96N95 335 aaPredicted RBP19.17■□□□□ 0.66
PDE1C-201ENST00000321453 PPP2R2CQ9Y2T4 447 aa19.17■□□□□ 0.66
PDE1C-201ENST00000321453 CLIC4Q9Y696 253 aa19.17■□□□□ 0.66
PDE1C-201ENST00000321453 COL15A1P39059 1388 aa19.17■□□□□ 0.66
PDE1C-201ENST00000321453 KCNQ3O43525 872 aa19.17■□□□□ 0.66
PDE1C-201ENST00000321453 SLC3A2P08195 630 aaKnown RBP19.17■□□□□ 0.66
PDE1C-201ENST00000321453 STK38Q15208 465 aa19.17■□□□□ 0.66
PDE1C-201ENST00000321453 ICE2Q659A1 982 aa19.17■□□□□ 0.66
PDE1C-201ENST00000321453 GPR161Q8N6U8 529 aaKnown RBP19.17■□□□□ 0.66
PDE1C-201ENST00000321453 GJB4Q9NTQ9 266 aa19.17■□□□□ 0.66
PDE1C-201ENST00000321453 CEP170BQ9Y4F5 1589 aaPredicted RBP19.16■□□□□ 0.66
PDE1C-201ENST00000321453 TEFQ10587 303 aa19.16■□□□□ 0.66
PDE1C-201ENST00000321453 NBPF6Q5VWK0 638 aa19.16■□□□□ 0.66
PDE1C-201ENST00000321453 RAB11FIP4Q86YS3 637 aa19.16■□□□□ 0.66
PDE1C-201ENST00000321453 NBPF4Q96M43 638 aa19.16■□□□□ 0.66
PDE1C-201ENST00000321453 SRRTQ9BXP5 876 aaKnown RBP19.16■□□□□ 0.66
PDE1C-201ENST00000321453 CRYBG1Q9Y4K1 1723 aa19.16■□□□□ 0.66
PDE1C-201ENST00000321453 CYP21A2P08686 494 aa19.16■□□□□ 0.66
PDE1C-201ENST00000321453 GPATCH11Q8N954 259 aa19.16■□□□□ 0.66
PDE1C-201ENST00000321453 EXOC4Q96A65 974 aa19.16■□□□□ 0.66
PDE1C-201ENST00000321453 A0A0G2JLW4 131 aa19.15■□□□□ 0.66
PDE1C-201ENST00000321453 TFRCP02786 760 aaKnown RBP19.15■□□□□ 0.66
PDE1C-201ENST00000321453 TOGARAM2Q6ZUX3 1019 aa19.15■□□□□ 0.66
PDE1C-201ENST00000321453 HIP1O00291 1037 aa19.15■□□□□ 0.66
PDE1C-201ENST00000321453 TPM1P09493 284 aa19.15■□□□□ 0.66
PDE1C-201ENST00000321453 FAN1Q9Y2M0 1017 aa19.15■□□□□ 0.66
PDE1C-201ENST00000321453 TOP1P11387 765 aaKnown RBP19.15■□□□□ 0.66
PDE1C-201ENST00000321453 TTC31Q49AM3 519 aaPredicted RBP19.15■□□□□ 0.66
PDE1C-201ENST00000321453 STOX1Q6ZVD7 989 aa19.15■□□□□ 0.66
PDE1C-201ENST00000321453 MED23Q9ULK4 1368 aa19.14■□□□□ 0.65
PDE1C-201ENST00000321453 G3BP1Q13283 466 aaKnown RBP eCLIP19.14■□□□□ 0.65
PDE1C-201ENST00000321453 E2F4Q16254 413 aa19.14■□□□□ 0.65
PDE1C-201ENST00000321453 GOLGA6L1Q8N7Z2 621 aa19.14■□□□□ 0.65
PDE1C-201ENST00000321453 METP08581 1390 aa19.14■□□□□ 0.65
PDE1C-201ENST00000321453 CCP110O43303 1012 aa19.14■□□□□ 0.65
PDE1C-201ENST00000321453 ATP8B1O43520 1251 aa19.14■□□□□ 0.65
PDE1C-201ENST00000321453 ADKP55263 362 aaKnown RBP19.14■□□□□ 0.65
PDE1C-201ENST00000321453 CCDC12Q8WUD4 166 aaPredicted RBP19.14■□□□□ 0.65
PDE1C-201ENST00000321453 MRFAP1Q9Y605 127 aa19.14■□□□□ 0.65
PDE1C-201ENST00000321453 MTX1Q13505 466 aa19.13■□□□□ 0.65
PDE1C-201ENST00000321453 SMARCC2Q8TAQ2 1214 aa19.13■□□□□ 0.65
PDE1C-201ENST00000321453 HMG20BQ9P0W2 317 aa19.13■□□□□ 0.65
PDE1C-201ENST00000321453 NLRP12P59046 1061 aa19.13■□□□□ 0.65
PDE1C-201ENST00000321453 MAP3K9P80192 1104 aa19.13■□□□□ 0.65
PDE1C-201ENST00000321453 HSD3B7Q9H2F3 369 aa19.13■□□□□ 0.65
PDE1C-201ENST00000321453 MAP3K2Q9Y2U5 619 aa19.13■□□□□ 0.65
PDE1C-201ENST00000321453 JRKLQ9Y4A0 524 aa19.13■□□□□ 0.65
PDE1C-201ENST00000321453 MLH3Q9UHC1 1453 aa19.13■□□□□ 0.65
PDE1C-201ENST00000321453 ZNF202O95125 648 aa19.12■□□□□ 0.65
PDE1C-201ENST00000321453 MARCKSP29966 332 aaPredicted RBP19.12■□□□□ 0.65
PDE1C-201ENST00000321453 RSRC2Q7L4I2 434 aaKnown RBP19.12■□□□□ 0.65
PDE1C-201ENST00000321453 GOLGA1Q92805 767 aa19.12■□□□□ 0.65
PDE1C-201ENST00000321453 PLEKHG2Q9H7P9 1386 aa19.12■□□□□ 0.65
PDE1C-201ENST00000321453 PXDNLA1KZ92 1463 aa19.12■□□□□ 0.65
PDE1C-201ENST00000321453 C3P01024 1663 aa19.12■□□□□ 0.65
PDE1C-201ENST00000321453 ZSCAN12O43309 604 aa19.12■□□□□ 0.65
PDE1C-201ENST00000321453 KCNJ6P48051 423 aa19.12■□□□□ 0.65
PDE1C-201ENST00000321453 PSME1Q06323 249 aa19.12■□□□□ 0.65
PDE1C-201ENST00000321453 NAA16Q6N069 864 aaPredicted RBP19.12■□□□□ 0.65
PDE1C-201ENST00000321453 NEDD4P46934 1319 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms