RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 CHAF1AQ13111 956 aaPredicted RBP10.23□□□□□ -0.77
CLK1-201ENST00000321356 SNW1Q13573 536 aaKnown RBP10.23□□□□□ -0.77
CLK1-201ENST00000321356 NBPF14Q5TI25 921 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 NBPF10Q6P3W6 841 aaKnown RBP10.23□□□□□ -0.77
CLK1-201ENST00000321356 PROSER2Q86WR7 435 aaPredicted RBP10.23□□□□□ -0.77
CLK1-201ENST00000321356 NBPF15Q8N660 670 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 ENGASEQ8NFI3 743 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 ANKRD7Q92527 254 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 ZNF274Q96GC6 653 aaPredicted RBP10.23□□□□□ -0.77
CLK1-201ENST00000321356 NRBP1Q9UHY1 535 aa10.23□□□□□ -0.77
CLK1-201ENST00000321356 NWD2Q9ULI1 1742 aa10.22□□□□□ -0.77
CLK1-201ENST00000321356 MAST3O60307 1309 aa10.22□□□□□ -0.77
CLK1-201ENST00000321356 E7EWF7 191 aa10.22□□□□□ -0.77
CLK1-201ENST00000321356 HSPD1P10809 573 aaKnown RBP10.22□□□□□ -0.77
CLK1-201ENST00000321356 FGD1P98174 961 aa10.22□□□□□ -0.77
CLK1-201ENST00000321356 STX1AQ16623 288 aa10.22□□□□□ -0.77
CLK1-201ENST00000321356 SMAP1Q8IYB5 467 aaPredicted RBP10.22□□□□□ -0.77
CLK1-201ENST00000321356 MRFAP1L1Q96HT8 127 aa10.22□□□□□ -0.77
CLK1-201ENST00000321356 USP28Q96RU2 1077 aa10.22□□□□□ -0.77
CLK1-201ENST00000321356 GOLPH3LQ9H4A5 285 aa10.22□□□□□ -0.77
CLK1-201ENST00000321356 KCPQ6ZWJ8 1503 aa10.22□□□□□ -0.77
CLK1-201ENST00000321356 DCCP43146 1447 aa10.22□□□□□ -0.77
CLK1-201ENST00000321356 CIAO1O76071 339 aa10.21□□□□□ -0.77
CLK1-201ENST00000321356 PDIA3P30101 505 aaKnown RBP10.21□□□□□ -0.77
CLK1-201ENST00000321356 CABP4P57796 275 aa10.21□□□□□ -0.77
CLK1-201ENST00000321356 FAM160A1Q05DH4 1040 aa10.21□□□□□ -0.77
CLK1-201ENST00000321356 SLFNL1Q499Z3 407 aa10.21□□□□□ -0.77
CLK1-201ENST00000321356 C11orf57Q6ZUT1 292 aaPredicted RBP10.21□□□□□ -0.77
CLK1-201ENST00000321356 ILDR1Q86SU0 546 aaPredicted RBP10.21□□□□□ -0.77
CLK1-201ENST00000321356 CCAR1Q8IX12 1150 aaKnown RBP10.21□□□□□ -0.77
CLK1-201ENST00000321356 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.21□□□□□ -0.77
CLK1-201ENST00000321356 CACTINQ8WUQ7 758 aaKnown RBP10.21□□□□□ -0.77
CLK1-201ENST00000321356 CHMP4CQ96CF2 233 aa10.21□□□□□ -0.77
CLK1-201ENST00000321356 ZNF396Q96N95 335 aaPredicted RBP10.21□□□□□ -0.77
CLK1-201ENST00000321356 ATG3Q9NT62 314 aa10.21□□□□□ -0.77
CLK1-201ENST00000321356 CWC25Q9NXE8 425 aaPredicted RBP10.21□□□□□ -0.77
CLK1-201ENST00000321356 CLIP2Q9UDT6 1046 aa10.21□□□□□ -0.77
CLK1-201ENST00000321356 TNS3Q68CZ2 1445 aa10.21□□□□□ -0.78
CLK1-201ENST00000321356 CPDO75976 1380 aa10.21□□□□□ -0.78
CLK1-201ENST00000321356 CARMIL3Q8ND23 1372 aa10.21□□□□□ -0.78
CLK1-201ENST00000321356 A0A0G2JLW4 131 aa10.21□□□□□ -0.78
CLK1-201ENST00000321356 EYA2O00167 538 aa10.21□□□□□ -0.78
CLK1-201ENST00000321356 RNF113AO15541 343 aaKnown RBP10.21□□□□□ -0.78
CLK1-201ENST00000321356 TIMM10P62072 90 aa10.21□□□□□ -0.78
CLK1-201ENST00000321356 CCDC144BQ3MJ40 725 aa10.21□□□□□ -0.78
CLK1-201ENST00000321356 DRC7Q8IY82 874 aa10.21□□□□□ -0.78
CLK1-201ENST00000321356 CCDC144CPQ8IYA2 1237 aa10.21□□□□□ -0.78
CLK1-201ENST00000321356 NEUROD6Q96NK8 337 aa10.21□□□□□ -0.78
CLK1-201ENST00000321356 FTOQ9C0B1 505 aaKnown RBP eCLIP10.21□□□□□ -0.78
CLK1-201ENST00000321356 NCOA5Q9HCD5 579 aaKnown RBP10.21□□□□□ -0.78
CLK1-201ENST00000321356 CSB-PGBD3P0DP91 1061 aa10.2□□□□□ -0.78
CLK1-201ENST00000321356 CEBPZQ03701 1054 aaKnown RBP10.2□□□□□ -0.78
CLK1-201ENST00000321356 SYCP1Q15431 976 aa10.2□□□□□ -0.78
CLK1-201ENST00000321356 CCDC73Q6ZRK6 1079 aa10.2□□□□□ -0.78
CLK1-201ENST00000321356 TTLL7Q6ZT98 887 aa10.2□□□□□ -0.78
CLK1-201ENST00000321356 CCDC191Q8NCU4 936 aa10.2□□□□□ -0.78
CLK1-201ENST00000321356 RNF39Q9H2S5 420 aa10.2□□□□□ -0.78
CLK1-201ENST00000321356 A0A1B0GUL7 405 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 FAM177BA6PVY3 158 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 SMTNL1A8MU46 457 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 FOXP2O15409 715 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 NEMFO60524 1076 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 NPM3O75607 178 aaKnown RBP10.19□□□□□ -0.78
CLK1-201ENST00000321356 IFIT1P09914 478 aaKnown RBP10.19□□□□□ -0.78
CLK1-201ENST00000321356 FDPSP14324 419 aaKnown RBP10.19□□□□□ -0.78
CLK1-201ENST00000321356 RBM6P78332 1123 aaKnown RBP10.19□□□□□ -0.78
CLK1-201ENST00000321356 CCT2P78371 535 aaKnown RBP10.19□□□□□ -0.78
CLK1-201ENST00000321356 LRRC24Q50LG9 513 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 DHX40Q8IX18 779 aaKnown RBP10.19□□□□□ -0.78
CLK1-201ENST00000321356 PKNOX2Q96KN3 472 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 RTEL1Q9NZ71 1219 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 MYH7P12883 1935 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 A0A1W2PQ27 194 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 A0A1W2PQ64 194 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 A0A1W2PQD8 194 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 GOLGA6L19H0YKK7 550 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 M0R2C6 588 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 KINO60870 393 aaKnown RBP10.19□□□□□ -0.78
CLK1-201ENST00000321356 LRRC8AQ8IWT6 810 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 FMR1NBQ8N0W7 255 aaPredicted RBP10.19□□□□□ -0.78
CLK1-201ENST00000321356 OSBP2Q969R2 916 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 ANO10Q9NW15 660 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 TNS2Q63HR2 1409 aa10.19□□□□□ -0.78
CLK1-201ENST00000321356 CHRNA2Q15822 529 aa10.18□□□□□ -0.78
CLK1-201ENST00000321356 PDCL2Q8N4E4 241 aa10.18□□□□□ -0.78
CLK1-201ENST00000321356 FSIP1Q8NA03 581 aa10.18□□□□□ -0.78
CLK1-201ENST00000321356 CABLES1Q8TDN4 633 aa10.18□□□□□ -0.78
CLK1-201ENST00000321356 MRPS27Q92552 414 aaKnown RBP10.18□□□□□ -0.78
CLK1-201ENST00000321356 DDX17Q92841 729 aaKnown RBP10.18□□□□□ -0.78
CLK1-201ENST00000321356 C16orf45Q96MC5 204 aaPredicted RBP10.18□□□□□ -0.78
CLK1-201ENST00000321356 FBXO3Q9UK99 471 aa10.18□□□□□ -0.78
CLK1-201ENST00000321356 CCDC9Q9Y3X0 531 aaKnown RBP10.18□□□□□ -0.78
CLK1-201ENST00000321356 ABCC12Q96J65 1359 aa10.18□□□□□ -0.78
CLK1-201ENST00000321356 NEDD4P46934 1319 aa10.18□□□□□ -0.78
CLK1-201ENST00000321356 STRCP1A6NGW2 1772 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 ERVV-2B6SEH9 535 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 C4AP0C0L4 1744 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 C4BP0C0L5 1744 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 TNNT1P13805 278 aa10.17□□□□□ -0.78
CLK1-201ENST00000321356 ME1P48163 572 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms