RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 SEC62Q99442 399 aaKnown RBP21.76■■□□□ 1.07
SHISA3-201ENST00000319234 PDRG1Q9NUG6 133 aa21.76■■□□□ 1.07
SHISA3-201ENST00000319234 RBM27Q9P2N5 1060 aaKnown RBP21.76■■□□□ 1.07
SHISA3-201ENST00000319234 FKBP4Q02790 459 aaKnown RBP eCLIP21.75■■□□□ 1.07
SHISA3-201ENST00000319234 CCDC129Q6ZRS4 1044 aa21.75■■□□□ 1.07
SHISA3-201ENST00000319234 RUFY3Q7L099 469 aa21.75■■□□□ 1.07
SHISA3-201ENST00000319234 ZSCAN30Q86W11 494 aa21.75■■□□□ 1.07
SHISA3-201ENST00000319234 ZNF512BQ96KM6 892 aaPredicted RBP21.75■■□□□ 1.07
SHISA3-201ENST00000319234 CCNL1Q9UK58 526 aaPredicted RBP21.75■■□□□ 1.07
SHISA3-201ENST00000319234 LIMCH1Q9UPQ0 1083 aa21.75■■□□□ 1.07
SHISA3-201ENST00000319234 PDLIM2Q96JY6 352 aa21.74■■□□□ 1.07
SHISA3-201ENST00000319234 U3KPZ7 1027 aaPredicted RBP21.74■■□□□ 1.07
SHISA3-201ENST00000319234 RPAP1Q9BWH6 1393 aaPredicted RBP21.74■■□□□ 1.07
SHISA3-201ENST00000319234 CPA1P15085 419 aa21.74■■□□□ 1.07
SHISA3-201ENST00000319234 FOXD4L5Q5VV16 416 aaPredicted RBP21.74■■□□□ 1.07
SHISA3-201ENST00000319234 SEPT12Q8IYM1 358 aa21.74■■□□□ 1.07
SHISA3-201ENST00000319234 FOXD4L4Q8WXT5 416 aaPredicted RBP21.74■■□□□ 1.07
SHISA3-201ENST00000319234 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.74■■□□□ 1.07
SHISA3-201ENST00000319234 DDX60Q8IY21 1712 aaKnown RBP21.73■■□□□ 1.07
SHISA3-201ENST00000319234 TMEM87AQ8NBN3 555 aa21.73■■□□□ 1.07
SHISA3-201ENST00000319234 MPHOSPH8Q99549 860 aa21.73■■□□□ 1.07
SHISA3-201ENST00000319234 SEC31BQ9NQW1 1179 aa21.73■■□□□ 1.07
SHISA3-201ENST00000319234 NARFQ9UHQ1 456 aa21.73■■□□□ 1.07
SHISA3-201ENST00000319234 SCARF1Q14162 830 aa21.72■■□□□ 1.07
SHISA3-201ENST00000319234 PUM3Q15397 648 aaKnown RBP21.72■■□□□ 1.07
SHISA3-201ENST00000319234 LAMB2P55268 1798 aa21.72■■□□□ 1.07
SHISA3-201ENST00000319234 FGFR2P21802 821 aa21.72■■□□□ 1.07
SHISA3-201ENST00000319234 LPIN2Q92539 896 aa21.72■■□□□ 1.07
SHISA3-201ENST00000319234 PHF14O94880 888 aa21.71■■□□□ 1.07
SHISA3-201ENST00000319234 ZFYP08048 801 aaPredicted RBP21.71■■□□□ 1.07
SHISA3-201ENST00000319234 IGHMBP2P38935 993 aaKnown RBP21.71■■□□□ 1.07
SHISA3-201ENST00000319234 ZAP70P43403 619 aa21.71■■□□□ 1.07
SHISA3-201ENST00000319234 KRT32Q14532 448 aa21.71■■□□□ 1.07
SHISA3-201ENST00000319234 BCL2L12Q9HB09 334 aa21.71■■□□□ 1.07
SHISA3-201ENST00000319234 NSFL1CQ9UNZ2 370 aaKnown RBP21.71■■□□□ 1.07
SHISA3-201ENST00000319234 SYCE3A1L190 88 aa21.7■■□□□ 1.07
SHISA3-201ENST00000319234 CHAMP1Q96JM3 812 aa21.7■■□□□ 1.07
SHISA3-201ENST00000319234 ZSCAN31Q96LW9 406 aaPredicted RBP21.7■■□□□ 1.07
SHISA3-201ENST00000319234 DSCC1Q9BVC3 393 aa21.7■■□□□ 1.07
SHISA3-201ENST00000319234 GNPATO15228 680 aa21.7■■□□□ 1.06
SHISA3-201ENST00000319234 SLFNL1Q499Z3 407 aa21.7■■□□□ 1.06
SHISA3-201ENST00000319234 ERFEQ4G0M1 354 aa21.7■■□□□ 1.06
SHISA3-201ENST00000319234 BLOC1S2Q6QNY1 142 aa21.7■■□□□ 1.06
SHISA3-201ENST00000319234 NAP1L5Q96NT1 182 aaPredicted RBP21.7■■□□□ 1.06
SHISA3-201ENST00000319234 ALDH8A1Q9H2A2 487 aaPredicted RBP21.7■■□□□ 1.06
SHISA3-201ENST00000319234 UQCRFS1P1P0C7P4 283 aa21.69■■□□□ 1.06
SHISA3-201ENST00000319234 MCAMP43121 646 aa21.69■■□□□ 1.06
SHISA3-201ENST00000319234 TBC1D9BQ66K14 1250 aa21.69■■□□□ 1.06
SHISA3-201ENST00000319234 KLHL34Q8N239 644 aa21.69■■□□□ 1.06
SHISA3-201ENST00000319234 HELBQ8NG08 1087 aaPredicted RBP21.69■■□□□ 1.06
SHISA3-201ENST00000319234 RTCBQ9Y3I0 505 aaKnown RBP21.69■■□□□ 1.06
SHISA3-201ENST00000319234 SCN7AQ01118 1682 aa21.69■■□□□ 1.06
SHISA3-201ENST00000319234 MAST3O60307 1309 aa21.69■■□□□ 1.06
SHISA3-201ENST00000319234 SLC5A1P13866 664 aa21.68■■□□□ 1.06
SHISA3-201ENST00000319234 SF3B3Q15393 1217 aaKnown RBP21.68■■□□□ 1.06
SHISA3-201ENST00000319234 SLC10A5Q5PT55 438 aa21.68■■□□□ 1.06
SHISA3-201ENST00000319234 CCDC102BQ68D86 513 aa21.68■■□□□ 1.06
SHISA3-201ENST00000319234 QTRT2Q9H974 415 aaKnown RBP21.68■■□□□ 1.06
SHISA3-201ENST00000319234 TAF6LQ9Y6J9 622 aa21.68■■□□□ 1.06
SHISA3-201ENST00000319234 ZPR1O75312 459 aa21.68■■□□□ 1.06
SHISA3-201ENST00000319234 ZSCAN22P10073 491 aaPredicted RBP21.68■■□□□ 1.06
SHISA3-201ENST00000319234 RPS6KB1P23443 525 aa21.68■■□□□ 1.06
SHISA3-201ENST00000319234 ARID4AP29374 1257 aaPredicted RBP21.68■■□□□ 1.06
SHISA3-201ENST00000319234 SMIM5Q71RC9 77 aa21.68■■□□□ 1.06
SHISA3-201ENST00000319234 SH2B1Q9NRF2 756 aaPredicted RBP21.68■■□□□ 1.06
SHISA3-201ENST00000319234 ATP6V1DQ9Y5K8 247 aa21.68■■□□□ 1.06
SHISA3-201ENST00000319234 LY75O60449 1722 aa21.67■■□□□ 1.06
SHISA3-201ENST00000319234 MSNP26038 577 aaKnown RBP21.67■■□□□ 1.06
SHISA3-201ENST00000319234 CDC5LQ99459 802 aaKnown RBP21.67■■□□□ 1.06
SHISA3-201ENST00000319234 BCL11BQ9C0K0 894 aaPredicted RBP21.67■■□□□ 1.06
SHISA3-201ENST00000319234 SBF2Q86WG5 1849 aa21.67■■□□□ 1.06
SHISA3-201ENST00000319234 M0R2C6 588 aa21.67■■□□□ 1.06
SHISA3-201ENST00000319234 ANKRD1Q15327 319 aa21.67■■□□□ 1.06
SHISA3-201ENST00000319234 TTF1Q15361 905 aaPredicted RBP21.67■■□□□ 1.06
SHISA3-201ENST00000319234 PI16Q6UXB8 463 aa21.67■■□□□ 1.06
SHISA3-201ENST00000319234 BICDL1Q6ZP65 573 aa21.67■■□□□ 1.06
SHISA3-201ENST00000319234 OSBP2Q969R2 916 aa21.67■■□□□ 1.06
SHISA3-201ENST00000319234 LARP6Q9BRS8 491 aaKnown RBP21.67■■□□□ 1.06
SHISA3-201ENST00000319234 NYXQ9GZU5 481 aa21.67■■□□□ 1.06
SHISA3-201ENST00000319234 SRP68Q9UHB9 627 aaKnown RBP21.67■■□□□ 1.06
SHISA3-201ENST00000319234 CYP21A2P08686 494 aa21.66■■□□□ 1.06
SHISA3-201ENST00000319234 HSPD1P10809 573 aaKnown RBP21.66■■□□□ 1.06
SHISA3-201ENST00000319234 PHKA1P46020 1223 aa21.66■■□□□ 1.06
SHISA3-201ENST00000319234 ZSCAN25Q6NSZ9 544 aa21.66■■□□□ 1.06
SHISA3-201ENST00000319234 USP48Q86UV5 1035 aa21.66■■□□□ 1.06
SHISA3-201ENST00000319234 TSPY26PQ9H489 355 aa21.66■■□□□ 1.06
SHISA3-201ENST00000319234 SMC3Q9UQE7 1217 aa21.66■■□□□ 1.06
SHISA3-201ENST00000319234 TCHHQ07283 1943 aa21.66■■□□□ 1.06
SHISA3-201ENST00000319234 STX6O43752 255 aa21.65■■□□□ 1.06
SHISA3-201ENST00000319234 APPBP2Q92624 585 aa21.65■■□□□ 1.06
SHISA3-201ENST00000319234 SETDB2Q96T68 719 aa21.65■■□□□ 1.06
SHISA3-201ENST00000319234 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.65■■□□□ 1.06
SHISA3-201ENST00000319234 PDIA4P13667 645 aaKnown RBP21.65■■□□□ 1.06
SHISA3-201ENST00000319234 GTF2E1P29083 439 aaPredicted RBP21.65■■□□□ 1.06
SHISA3-201ENST00000319234 WASHC4Q2M389 1173 aa21.65■■□□□ 1.06
SHISA3-201ENST00000319234 ARHGEF1Q92888 912 aaKnown RBP21.65■■□□□ 1.06
SHISA3-201ENST00000319234 NEK1Q96PY6 1258 aa21.65■■□□□ 1.06
SHISA3-201ENST00000319234 ARAP2Q8WZ64 1704 aa21.64■■□□□ 1.06
SHISA3-201ENST00000319234 LARGE1O95461 756 aa21.64■■□□□ 1.05
SHISA3-201ENST00000319234 NOL7Q9UMY1 257 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms